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Angelarchaeales Thermoplasmata CuMMO Soil and Sediment Community

A soil and aquifer-sediment microbial community in which a newly defined Thermoplasmatota archaeal order, Ca. Angelarchaeales, encodes divergent copper membrane monooxygenases (CuMMOs). Twenty genomes from distinct archaeal species were recovered from grassland and hillslope soils and aquifer sediments. The CuMMO proteins resemble Nitrososphaerales (ammonia monooxygenase) enzymes more than bacterial CuMMOs and retain all functional residues required for monooxygenase activity. Angelarchaeales genomes are enriched in blue copper proteins (BCPs) including plastocyanin-like electron carriers and divergent nitrite reductase-like (nirK) 2-domain cupredoxin proteins, encode strong peptide and amino-acid uptake/degradation capacity, and share electron transport mechanisms with Nitrososphaerales. Angelarchaeales are abundant in some of the source environments.

Taxonomy

Taxon Ontology ID Functional Roles Abundance
Ca. Angelarchaeales (Thermoplasmatota) NCBITaxon:2283796
PRIMARY_PRODUCER PRIMARY_DEGRADER
ABUNDANT
  • PMID:34987183 - SUPPORT (IN_VIVO)
    "20 genomes from distinct archaeal species encoding divergent CuMMO sequences"
  • PMID:34987183 - SUPPORT (IN_VIVO)
    "phylogenetically clustered in a previously unnamed Thermoplasmatota order, herein named the Ca. Angelarchaeales"

Ecological Interactions

Ecological interaction network for Angelarchaeales Thermoplasmata CuMMO Soil and Sediment Community Bipartite graph where circle nodes represent taxa and colored rectangles represent ecological interactions (cross-feeding, mutualism, syntrophy, competition, commensalism).
Taxon
Cross-feeding
Mutualism
Syntrophy
Competition
Commensalism
Niche partitioning
Colonization facilitation
Strain competition
Predation

Archaeal CuMMO-Driven Aerobic Oxidation

COMMENSALISM

Biological Processes:

Evidence

  • PMID:34987183 - SUPPORT (IN_VIVO)
    "The CuMMO proteins in Ca. Angelarchaeales are more similar in structure to those in Nitrososphaerales than those of bacteria"

Blue Copper Protein Electron Transport Repertoire

COMMENSALISM

Evidence

  • PMID:34987183 - SUPPORT (IN_VIVO)
    "significantly enriched in blue copper proteins (BCPs) relative to sibling lineages"

Peptide and Amino Acid Heterotrophy

CROSS_FEEDING

Metabolites: amino acid (CHEBI:33709)

Biological Processes:

  • cellular amino acid catabolic process (GO:0009063)

Evidence

  • PMID:34987183 - SUPPORT (IN_VIVO)
    "significant capacity for peptide/amino acid uptake and degradation"

External Resources

Name Repository Resource ID
Primary publication for the Angelarchaeales soil/sediment community
PubMed record for the Diamond et al. 2022 ISME J paper on Angelarchaeales (Thermoplasmatota) encoding novel CuMMOs.
OTHER PMID:34987183
  • PMID:34987183 - SUPPORT (IN_VIVO)
    "Soils and sediments host Thermoplasmata archaea encoding novel copper membrane monooxygenases (CuMMOs)"
DOI landing page
DOI link to the ISME J paper.
OTHER doi:10.1038/s41396-021-01177-5

Environmental Factors

Factor Value Unit
Source environment grassland and hillslope soils plus aquifer sediments N/A
  • PMID:34987183 - SUPPORT (IN_VIVO)
    "From grassland and hillslope soils and aquifer sediments"