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DIET-based Simplified Lignocellulose-to-Methane Consortia (DIETsimp)

Two simplified methanogenic consortia (DIETsimp) constructed by top-down selection from cow manure combined with paddy soil or marine sediment inocula for high-efficiency conversion of lignocellulose to methane via direct interspecies electron transfer (DIET). Metagenomic analysis identified Methanosarcina mazei, capable of accepting electrons via DIET, as the dominant archaeon, and the electroactive bacteria Sphaerochaeta globosa and Clostridium aceticum as the dominant bacteria. The proposed DIET-based methanogenic pathway has S. globosa and C. aceticum metabolizing intermediates (xylose, glucose, pyruvate, acetate) and transferring electrons to M. mazei for reduction of CO2 to methane. Both consortia shortened methanogenesis periods and increased methane production rates relative to conventional anaerobic digestion.

Taxonomy

Taxon Ontology ID Functional Roles Abundance
Methanosarcina mazei NCBITaxon:2209
SYNTROPHIC_PARTNER ELECTRON_ACCEPTOR ELECTROTROPH
N/A
  • PMID:42229598 - SUPPORT (IN_VITRO)
    "Methanosarcina mazei, capable of accepting electrons via DIET, and electroactive species, Sphaerochaeta globosa and Clostridium aceticum, were the dominant archaea and bacteria in both DIETsimp, respectively."
Sphaerochaeta globosa NCBITaxon:1131703
PRIMARY_DEGRADER ELECTRON_DONOR ELECTROGEN SYNTROPHIC_PARTNER
N/A
  • PMID:42229598 - SUPPORT (IN_VITRO)
    "Methanosarcina mazei, capable of accepting electrons via DIET, and electroactive species, Sphaerochaeta globosa and Clostridium aceticum, were the dominant archaea and bacteria in both DIETsimp, respectively."
Clostridium aceticum NCBITaxon:84022
PRIMARY_DEGRADER ELECTRON_DONOR ELECTROGEN SYNTROPHIC_PARTNER
N/A
  • PMID:42229598 - SUPPORT (IN_VITRO)
    "Methanosarcina mazei, capable of accepting electrons via DIET, and electroactive species, Sphaerochaeta globosa and Clostridium aceticum, were the dominant archaea and bacteria in both DIETsimp, respectively."

Ecological Interactions

Ecological interaction network for DIET-based Simplified Lignocellulose-to-Methane Consortia (DIETsimp) Bipartite graph where circle nodes represent taxa and colored rectangles represent ecological interactions (cross-feeding, mutualism, syntrophy, competition, commensalism).
Taxon
Cross-feeding
Mutualism
Syntrophy
Competition
Commensalism
Niche partitioning
Colonization facilitation
Strain competition
Predation

DIET syntrophy from S. globosa to M. mazei

SYNTROPHY

Source Taxon: Sphaerochaeta globosa

Target Taxon: Methanosarcina mazei

Metabolites: xylose (CHEBI:18222), D-glucose (CHEBI:17634), pyruvate (CHEBI:15361), acetate (CHEBI:30089), carbon dioxide (CHEBI:16526), methane (CHEBI:16183)

Evidence

  • PMID:42229598 - SUPPORT (IN_VITRO)
    "S. globosa and C. aceticum metabolized intermediates (e.g. xylose, glucose, pyruvate and acetate) and transferred electrons to M. mazei for the reduction of CO2 to methane"

DIET syntrophy from C. aceticum to M. mazei

SYNTROPHY

Source Taxon: Clostridium aceticum

Target Taxon: Methanosarcina mazei

Metabolites: xylose (CHEBI:18222), D-glucose (CHEBI:17634), pyruvate (CHEBI:15361), acetate (CHEBI:30089), carbon dioxide (CHEBI:16526), methane (CHEBI:16183)

Evidence

  • PMID:42229598 - SUPPORT (IN_VITRO)
    "S. globosa and C. aceticum metabolized intermediates (e.g. xylose, glucose, pyruvate and acetate) and transferred electrons to M. mazei for the reduction of CO2 to methane"

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