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DVM Tri-culture

A three-member synthetic consortium consisting of Desulfovibrio vulgaris (Dv), Methanococcus maripaludis (Mm), and Methanosarcina barkeri (Mb) that converts lactate to methane under varying sulfate conditions. D. vulgaris oxidizes lactate to acetate, CO2, and H2. Both methanogens (Mm and Mb) can consume the H2 produced by Dv, with Mm being a hydrogenotrophic methanogen and Mb capable of using both H2-CO2 and acetate for methanogenesis. The community demonstrates differential responses to geochemical gradients, particularly sulfate availability. In the absence of sulfate, all three species co-exist and methane production increases by almost 100% compared to Dv-Mm co-cultures. However, increasing sulfate levels shift community dynamics as Dv preferentially uses sulfate as an electron acceptor, creating competitive situations for both methanogens. This system provides insights into how geochemical gradients (particularly sulfate) regulate microbial interactions and methane production in anaerobic environments.

Taxonomy

Taxon Ontology ID Functional Roles Abundance
Desulfovibrio vulgaris NCBITaxon:881
PRIMARY_DEGRADER SYNTROPHIC_PARTNER
N/A
Methanococcus maripaludis NCBITaxon:39152
SYNTROPHIC_PARTNER
N/A
Methanosarcina barkeri NCBITaxon:2208
SYNTROPHIC_PARTNER
N/A

Ecological Interactions

Lactate Oxidation and H2/Acetate Production

SYNTROPHY

Source Taxon: Desulfovibrio vulgaris

Metabolites: lactate (CHEBI:24996), acetate (CHEBI:30089), dihydrogen (CHEBI:18276), sulfate (CHEBI:16189)

Biological Processes:

Downstream Effects:
Hydrogenotrophic Methanogenesis by M. maripaludis
Dual-pathway Methanogenesis by M. barkeri

Evidence

  • PMID:16345708 - SUPPORT (IN_VITRO)
    "vulgaris was grown in the absence of added sulfate in coculture with Methanosarcina barkeri (type strain), which uses both H(2)-CO(2) and acetate for methanogenesis, lactate was stoichiometrically degraded to CH(4) and presumably to CO(2)"
  • doi:10.1098/rsif.2019.0129 - SUPPORT (IN_VITRO)
    "With increasing sulfate, system stability and productivity decreases and does so faster in communities with aceto/hydrogenotrophic methanogens despite the continued presence of acetate"

Hydrogenotrophic Methanogenesis by M. maripaludis

SYNTROPHY

Source Taxon: Methanococcus maripaludis

Metabolites: dihydrogen (CHEBI:18276), methane (CHEBI:16183), carbon dioxide (CHEBI:16526)

Biological Processes:

Evidence

  • doi:10.1098/rsif.2019.0129 - SUPPORT (IN_VITRO)
    "With increasing sulfate, system stability and productivity decreases and does so faster in communities with aceto/hydrogenotrophic methanogens despite the continued presence of acetate"

Dual-pathway Methanogenesis by M. barkeri

SYNTROPHY

Source Taxon: Methanosarcina barkeri

Metabolites: dihydrogen (CHEBI:18276), acetate (CHEBI:30089), methane (CHEBI:16183)

Biological Processes:

Evidence

  • doi:10.1098/rsif.2019.0129 - SUPPORT (IN_VITRO)
    "Syntrophic interactions among sulfate reducers and aceto/hydrogenotrophic and obligate hydrogenotrophic methanogens form a key component of these communities, yet, the impact of these different syntrophic routes on methane production and their stability against sulfate availability are not well understood"
  • PMID:16345708 - SUPPORT (IN_VITRO)
    "vulgaris was grown in the absence of added sulfate in coculture with Methanosarcina barkeri (type strain), which uses both H(2)-CO(2) and acetate for methanogenesis, lactate was stoichiometrically degraded to CH(4) and presumably to CO(2)"

Sulfate-mediated Competition

COMPETITION

Source Taxon: Desulfovibrio vulgaris

Metabolites: sulfate (CHEBI:16189), dihydrogen (CHEBI:18276)

Biological Processes:

Evidence

  • doi:10.1098/rsif.2019.0129 - SUPPORT (IN_VITRO)
    "With increasing sulfate, system stability and productivity decreases and does so faster in communities with aceto/hydrogenotrophic methanogens despite the continued presence of acetate"

Environmental Factors

Factor Value Unit
Anaerobic Conditions Strict anaerobic N/A
Sulfate Gradient Variable (0 to increasing concentrations) N/A
Hydrogen Partial Pressure Must be maintained at low levels for syntrophy N/A
Lactate Availability Primary carbon and energy source N/A
Community Productivity Response 100% increase in no-sulfate conditions N/A