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Escherichia coli + Bifidobacterium bifidum Infant-gut Mutualistic Co-culture

Two-member infant-gut co-culture of Escherichia coli and Bifidobacterium bifidum. In healthy, term-born, breastfed infants these genera co-exist despite differing ecological strategies and share evolutionary adaptations for lactose acquisition. In vitro co-culture demonstrates a mutualistic cross-feeding interaction in which E. coli supplies cysteine to its auxotrophic partner B. bifidum, facilitating cooperative degradation of 2'-fucosyllactose (the predominant human milk oligosaccharide), and the liberated monosaccharides in turn sustain E. coli growth, potentially helping regulate E. coli abundance in the infant gut.

Taxonomy

Taxon Ontology ID Functional Roles Abundance
Escherichia coli NCBITaxon:562
CROSS_FEEDER SYNTROPHIC_PARTNER
N/A
  • PMID:42020426 - SUPPORT (IN_VITRO)
    "In vitro, we demonstrate that interactions between E. coli and Bifidobacterium bifidum are mutualistic in co-culture, where E. coli supplies cysteine to its auxotrophic partner"
Bifidobacterium bifidum NCBITaxon:1681
PRIMARY_DEGRADER CROSS_FEEDER
N/A
  • PMID:42020426 - SUPPORT (IN_VITRO)
    "In vitro, we demonstrate that interactions between E. coli and Bifidobacterium bifidum are mutualistic in co-culture, where E. coli supplies cysteine to its auxotrophic partner"

Ecological Interactions

Ecological interaction network for Escherichia coli + Bifidobacterium bifidum Infant-gut Mutualistic Co-culture Bipartite graph where circle nodes represent taxa and colored rectangles represent ecological interactions (cross-feeding, mutualism, syntrophy, competition, commensalism).
Taxon
Cross-feeding
Mutualism
Syntrophy
Competition
Commensalism
Niche partitioning
Colonization facilitation
Strain competition
Predation

Cysteine provision enabling cooperative 2'-fucosyllactose degradation

CROSS_FEEDING

Source Taxon: Escherichia coli

Target Taxon: Bifidobacterium bifidum

Metabolites: cysteine (CHEBI:15356), 2'-fucosyllactose (CHEBI:147155)

Evidence

  • PMID:42020426 - SUPPORT (IN_VITRO)
    "E. coli supplies cysteine to its auxotrophic partner, facilitating cooperative degradation of 2'-fucosyllactose, the predominant human milk oligosaccharide"

Monosaccharide return sustaining E. coli growth

CROSS_FEEDING

Source Taxon: Bifidobacterium bifidum

Target Taxon: Escherichia coli

Metabolites: monosaccharide (CHEBI:35381)

Evidence

  • PMID:42020426 - SUPPORT (IN_VITRO)
    "the liberated monosaccharides sustain E. coli growth, highlighting a cooperative cross-feeding interaction that may contribute to regulating E. coli abundance within the infant host"

Growth Media