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Geobacter-Clostridium DIET Community

A syntrophic two-member consortium consisting of Geobacter sulfurreducens and Clostridium pasteurianum that performs direct interspecies electron transfer (DIET) during glycerol fermentation. G. sulfurreducens acts as an exoelectrogen, oxidizing acetate and transferring electrons directly to C. pasteurianum via electrically conductive pili (nanowires). These electron transfers induce a metabolic shift in C. pasteurianum's glycerol fermentation pathway, redirecting carbon flux away from ethanol and butanol production toward increased 1,3-propanediol (PDO) and butyrate production. This represents a unique application of DIET where electron transfer serves not to drive methanogenesis but to modulate fermentation pathways, achieving a 37% increase in 1,3-propanediol and 38% increase in butyrate production. The bacteria establish physical contact through nanowires, enabling electron exchange without relying on diffusible hydrogen or formate carriers. This coculture demonstrates how controlled interspecies electron transfer can be exploited to optimize production of industrially relevant metabolites like 1,3-propanediol.

Taxonomy

Taxon Ontology ID Functional Roles Abundance
Geobacter sulfurreducens NCBITaxon:35554
SYNTROPHIC_PARTNER
N/A
Clostridium pasteurianum NCBITaxon:1501
PRIMARY_DEGRADER SYNTROPHIC_PARTNER
N/A

Ecological Interactions

Acetate Oxidation and Direct Electron Transfer

SYNTROPHY

Source Taxon: Geobacter sulfurreducens

Metabolites: acetate (CHEBI:30089)

Biological Processes:

Downstream Effects:
Glycerol Fermentation with DIET-Induced Metabolic Shift

Evidence

  • PMID:28287150 - SUPPORT (IN_VITRO)
    "Direct interspecies electron transfer (DIET) mechanism has been recently characterised with Geobacter species which couple the electron balance with other species through physical contacts"
  • PMID:28287150 - SUPPORT (IN_VITRO)
    "Physical contact between the two bacteria enabling electron exchange either directly via interspecies wiring, or indirectly using soluble electron mediators present in the medium such as L-cysteine"

Glycerol Fermentation with DIET-Induced Metabolic Shift

MUTUALISM

Source Taxon: Clostridium pasteurianum

Metabolites: glycerol (CHEBI:17754), 1,3-propanediol (CHEBI:16775), butyrate (CHEBI:30772), butanol (CHEBI:28885), ethanol (CHEBI:16236)

Biological Processes:

Evidence

  • PMID:28287150 - SUPPORT (IN_VITRO)
    "The present study deals with a co-culture of Geobacter sulfurreducens and Clostridium pasteurianum during glycerol fermentation"
  • PMID:28287150 - SUPPORT (IN_VITRO)
    "This metabolic shift was clearly induced by a small electron uptake that represented less than 0.6% of the electrons consumed by C. pasteurianum"
  • PMID:28287150 - SUPPORT (IN_VITRO)
    "Direct interspecies electron transfer (DIET) mechanism has been recently characterised with Geobacter species which couple the electron balance with o"

Environmental Factors

Factor Value Unit
Anaerobic Conditions Strict anaerobic N/A
Temperature 35°C N/A
Cell Contact and Nanowire Formation Required for DIET N/A
Electron Transfer Monitoring qPCR of 16S rRNA genes N/A