Two-member engineered co-culture of the green microalga Parachlorella kessleri and the yeast Saccharomyces cerevisiae, established to enhance microalgal lipid productivity. The partners form a mutualistic relationship based on reciprocal oxygen/carbon dioxide gas exchange. Under co-culture, biomass and lipid production increased 4-fold relative to microalgal monoculture. Yeast sustained microalgal growth during the transition to phototrophy after glucose depletion and promoted lipid accumulation through nutrient competition, while microalgae are inferred to provide metabolic support to the yeast via exopolysaccharide (EPS)-derived molecules. Nanomechanical analyses (AFM, FluidFM) showed increased EPS production and stronger, longer microalga-yeast cell-cell interactions in co-culture.
Taxonomy
| Taxon | Ontology ID | Functional Roles | Abundance |
|---|---|---|---|
| Parachlorella kessleri | NCBITaxon:3074 · TaxonMech · TraitMech |
PRIMARY_PRODUCER
CROSS_FEEDER
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N/A |
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| Saccharomyces cerevisiae | NCBITaxon:4932 · TaxonMech · TraitMech |
CROSS_FEEDER
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N/A |
|
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Ecological Interactions
The graph shows only explicitly linked interaction participants. Community members without an asserted participant link are omitted; membership alone does not imply an interaction.
Proposed Reciprocal Oxygen and Carbon Dioxide Exchange
HYPOTHESIZED - Reciprocal oxygen/carbon dioxide exchange is proposed for P. kessleri and S. cerevisiae. Results 3.2 of PMID42217804 attributes sustained algal growth after day 6 most likely to local yeast-derived CO2 enrichment. The inspected main-text methods do not directly measure reciprocal gas flux or isolate gas-exchange mediation. This is a mechanistic interpretation, not demonstrated bidirectional transfer or reciprocal fitness benefit. Separate supplements remain uninspected.
Source Taxon: Parachlorella kessleri
Target Taxon: Saccharomyces cerevisiae
Metabolites: oxygen (CHEBI:15379 · MediaIngredientMech · CMMMech), carbon dioxide (CHEBI:16526 · MediaIngredientMech · CMMMech)
HYPOTHESIZED - Respiratory CO2 and photosynthetic oxygen could support coculture growth. Main-text comparisons do not isolate gas exchange as the cause of the species-resolved algal cell increase or bulk relative lipid signal; medium enrichment contributes to the growth comparison.
Evidence
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PMID:42217804 - PARTIAL (OTHER)"Microalgae and yeasts can establish a mutualistic relationship based on reciprocal oxygen/carbon dioxide exchange, offering a strategy to overcome productivity limits caused by the slow growth of microalgae."
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PMID:42217804 - PARTIAL (IN_VITRO)"microalgal growth was sustained and boosted in co-culture, most likely due to the local CO2 enrichment of the medium provided by yeast activity, in addition to atmospheric CO2."
Yeast support of microalgal growth and lipid accumulation
P. kessleri growth was maintained in coculture after the day 6 transition to phototrophy. Figure 3 compares BBM + NO3 monoculture, glucose/peptone-enriched BG10P10 monoculture and BG10P10 coculture: reported day-12 algal cell concentrations are 2.8-fold and 4.8-fold the BBM control in enriched monoculture and coculture, respectively. Thus yeast is associated with an additional growth benefit, but the full 4.8-fold comparison includes medium enrichment. Nutrient competition and gas exchange are proposed explanations of the relative lipid response, not isolated mediation estimates. The day-14 bulk Nile Red assay does not establish taxon-specific lipid production.
Source Taxon: Saccharomyces cerevisiae
Target Taxon: Parachlorella kessleri
Biological Processes:
- growth (GO:0040007 · PathwayMech)
- lipid metabolic process (GO:0006629 · PathwayMech)
PARTIAL - Yeast-associated maintenance of algal growth contributes to the cell-count endpoint. Nutrient competition is the authors' proposed explanation of increased relative lipid signal. The enriched-medium control also increases growth, so the full control-relative fold change cannot be assigned to yeast or a particular exchanged metabolite.
Evidence
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PMID:42217804 - PARTIAL (IN_VITRO)"Yeast sustained microalgal growth during the transition to phototrophy after glucose depletion (day 6) and promoted lipid accumulation through nutrient competition."
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PMID:42217804 - SUPPORT (IN_VITRO)"The presence of glucose and peptone in BG10P10 medium brought higher cell concentrations, with a maximum at day 12 with a 2.8-fold higher concentration in BG10P10 condition and a 4.8-fold higher concentration in co-culture condition (Fig. 3A and B)."
Proposed EPS-Derived Metabolic Support of Yeast
HYPOTHESIZED - Yeast viability remained above 68% during approximately 8 days of nutrient limitation, which the authors interpret as possible metabolic support by microalgal EPS-derived molecules. AFM showed visible EPS and cell-surface changes, and FluidFM found stronger, longer cell interactions, likely associated with EPS. These positive viability and biophysical observations do not by themselves demonstrate EPS-carbon uptake, donor-to-recipient transfer or dependence of yeast survival on EPS.
Source Taxon: Parachlorella kessleri
Target Taxon: Saccharomyces cerevisiae
Metabolites: exopolysaccharide (CHEBI:72813 · MediaIngredientMech · CMMMech)
Evidence
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PMID:42217804 - PARTIAL (IN_VITRO)"yeast viability remained above 68%, indicating possible metabolic support from microalgae via exopolysaccharides (EPS) - derived molecules"
Coculture Algal Cell Increase and Relative Lipid Signal
Two distinct positive endpoints are reported for the P. kessleri-S. cerevisiae coculture. Figure 3 measures P. kessleri cell concentration: at day 12, BG10P10 coculture is reported as 4.8-fold the BBM + NO3 monoculture control, while BG10P10 algal monoculture is 2.8-fold that control. This is not a fourfold isolated yeast effect or a dry-biomass measurement. Separately, Methods 2.3 assays day-14 pellets resuspended at 1.0 x 10^8 cells/mL using bulk Nile Red fluorescence. Results 3.2 reports 3437 +/- 17 a.u. for BBM control and 14195 +/- 216 a.u. for coculture, and calls the latter 4.3-fold; the ratio of those means is approximately 4.13. Methods specifies 2 micrograms/mL dye, whereas Results specifies 2.5. These reporting conflicts remain unresolved. No species separation is described for this lipid assay in the inspected main text; relative signal is not lipid mass, volumetric productivity, or proof of exclusively algal lipid production. The combined endpoint remains community-level to preserve that mixed-assay boundary.
Biological Processes:
- growth (GO:0040007 · PathwayMech)
- lipid metabolic process (GO:0006629 · PathwayMech)
Evidence
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PMID:42217804 - SUPPORT (IN_VITRO)"The presence of glucose and peptone in BG10P10 medium brought higher cell concentrations, with a maximum at day 12 with a 2.8-fold higher concentration in BG10P10 condition and a 4.8-fold higher concentration in co-culture condition (Fig. 3A and B)."
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PMID:42217804 - SUPPORT (IN_VITRO)"to enable species differentiation, precise cell quantification and to measure cell population viability."
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PMID:42217804 - SUPPORT (IN_VITRO)"Relative lipid levels were then measured using Nile Red staining coupled with fluorescence spectroscopy (Rumin et al., 2015)."
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PMID:42217804 - SUPPORT (IN_VITRO)"Pellets were thawed immediately before analysis and resuspended in deionized water to a final concentration of 1.0 × 108 cells/mL."
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PMID:42217804 - SUPPORT (IN_VITRO)"3437 ± 17 a. u., and in co-culture conditions with a lipid content increased to 14195 ± 216 a. u.."
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PMID:42217804 - SUPPORT (IN_VITRO)"the co-culture exhibited a relative lipid content 4.3-fold higher than that observed in BBM + NO3."
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PMID:42217804 - SUPPORT (IN_VITRO)"concentration of 2 µg/mL in 40% (v/v) dimethyl sulfoxide (DMSO)"
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PMID:42217804 - SUPPORT (IN_VITRO)"a Nile red concentration of 2.5 µg/mL was selected for the comparison."
Knowledge gaps & discussions (1)
KNOWLEDGE_GAP OPEN Which measured gas, EPS and physical-interaction changes mediate the positive productivity and viability responses?
The public HAL main article has now been inspected: Figure 3 resolves algal cell-count attribution and the enriched-medium comparator, whereas Methods 2.3 uses bulk relative Nile Red signal. Preserve the 4.3 versus approximately 4.13 fold discrepancy and 2 versus 2.5 micrograms/mL dye conflict. Separate supplements and raw data remain uninspected. Main-text growth, viability and AFM/FluidFM observations do not isolate gas mediation or EPS uptake. The existing EPS-adhesion structure question remains open under issue #1681; no paid report or new topology is part of this repair. Non-graph metadata is outside this correction.
Attaches to: ecological_interactions#Proposed Reciprocal Oxygen and Carbon Dioxide Exchange, ecological_interactions#Yeast support of microalgal growth and lipid accumulation, ecological_interactions#Proposed EPS-Derived Metabolic Support of Yeast, ecological_interactions#Coculture Algal Cell Increase and Relative Lipid Signal
2 evidence item(s)
Yeast sustained microalgal growth during the transition to phototrophy after glucose depletion (day 6) and promoted lipid accumulation through nutrient competition.
Abstract reports algal growth maintenance and attributes lipid accumulation to nutrient competition; the latter is an interpretation, not isolated mediator necessity. Methods 2.3 measures bulk relative fluorescence.
yeast viability remained above 68%, indicating possible metabolic support from microalgae via exopolysaccharides (EPS) - derived molecules
Positive viability observation supports a proposed EPS mechanism, not directly traced carbon transfer or demonstrated necessity.
Growth Media
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