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Pseudomonas putida Pp-TE + Rhodococcus sp. RDK17 Terephthalic-acid Consortium

Two-strain synthetic consortium of an engineered degrader (Pseudomonas putida strain Pp-TE) and a native degrader (Rhodococcus sp. strain RDK17) grown with terephthalic acid (TPA), a primary polyethylene terephthalate (PET) monomer, as the sole carbon and energy source. Although both strains utilize TPA at comparable rates in monoculture, Pp-TE consistently outcompetes RDK17 in batch and multitransfer coculture fermentations. Dominance is driven jointly by exploitative competition for TPA and by interference competition through the Pp-TE type VI secretion system, which impairs RDK17 growth via contact-dependent inhibition. Loss of TPA metabolism in Pp-TE abolishes its dominance, illustrating how interspecies interaction and metabolic capability co-determine consortium structure and overall TPA degradation.

Taxonomy

Taxon Ontology ID Functional Roles Abundance
Pseudomonas putida strain Pp-TE (engineered) NCBITaxon:303
PRIMARY_DEGRADER
N/A
  • PMID:42324694 - SUPPORT (IN_VITRO)
    "we investigated the coculture dynamics of an engineered degrader (Pseudomonas putida strain Pp-TE) and a native degrader (Rhodococcus sp. strain RDK17) in the presence of TPA as the sole carbon and energy source"
Rhodococcus sp. strain RDK17 (native) NCBITaxon:1827
PRIMARY_DEGRADER
N/A
  • PMID:42324694 - SUPPORT (IN_VITRO)
    "we investigated the coculture dynamics of an engineered degrader (Pseudomonas putida strain Pp-TE) and a native degrader (Rhodococcus sp. strain RDK17) in the presence of TPA as the sole carbon and energy source"

Ecological Interactions

Ecological interaction network for Pseudomonas putida Pp-TE + Rhodococcus sp. RDK17 Terephthalic-acid Consortium Bipartite graph where circle nodes represent taxa and colored rectangles represent ecological interactions (cross-feeding, mutualism, syntrophy, competition, commensalism).
Taxon
Cross-feeding
Mutualism
Syntrophy
Competition
Commensalism
Niche partitioning
Colonization facilitation
Strain competition
Predation

Exploitative competition for terephthalic acid

COMPETITION

Source Taxon: Pseudomonas putida strain Pp-TE (engineered)

Target Taxon: Rhodococcus sp. strain RDK17 (native)

Metabolites: terephthalic acid (TPA) (CHEBI:15702)

Evidence

  • PMID:42324694 - SUPPORT (IN_VITRO)
    "Pp-TE consistently outcompeted RDK17 in batch and multitransfer coculture fermentations, even when RDK17 was inoculated at a significantly higher initial abundance"

Interference competition via type VI secretion system

COMPETITION

Source Taxon: Pseudomonas putida strain Pp-TE (engineered)

Target Taxon: Rhodococcus sp. strain RDK17 (native)

Evidence

  • PMID:42324694 - SUPPORT (IN_VITRO)
    "the dominance of Pp-TE was primarily conferred by its type VI secretion system, which impaired the growth of RDK17 via contact-dependent inhibition"

Growth Media