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Synthetic Periphyton Freshwater Biofilm

A 26-member phototrophic synthetic periphyton biofilm used as a reproducible freshwater model system for species dynamics and stressor response.

Taxonomy

Taxon Ontology ID Functional Roles Abundance
diatoms NCBITaxon:2836
PRIMARY_PRODUCER
N/A
  • PMID:35869094 - SUPPORT (IN_VITRO)
    "we rationally developed a workflow to construct a synthetic community by co-culturing 26 phototrophic species (i.e., diatoms, green algae, and cyanobacteria)"
green algae NCBITaxon:3041
PRIMARY_PRODUCER
N/A
  • PMID:35869094 - SUPPORT (IN_VITRO)
    "we rationally developed a workflow to construct a synthetic community by co-culturing 26 phototrophic species (i.e., diatoms, green algae, and cyanobacteria)"
cyanobacteria NCBITaxon:1117
PRIMARY_PRODUCER
N/A
  • PMID:35869094 - SUPPORT (IN_VITRO)
    "we rationally developed a workflow to construct a synthetic community by co-culturing 26 phototrophic species (i.e., diatoms, green algae, and cyanobacteria)"

Ecological Interactions

Ecological interaction network for Synthetic Periphyton Freshwater Biofilm Bipartite graph where circle nodes represent taxa and colored rectangles represent ecological interactions (cross-feeding, mutualism, syntrophy, competition, commensalism).
Taxon
Cross-feeding
Mutualism
Syntrophy
Competition
Commensalism
Niche partitioning
Colonization facilitation
Strain competition
Predation

Successional Periphyton Biofilm Assembly

COLONIZATION_FACILITATION

Evidence

  • PMID:35869094 - SUPPORT (IN_VITRO)
    "we rationally developed a workflow to construct a synthetic community by co-culturing 26 phototrophic species (i.e., diatoms, green algae, and cyanobacteria)"

Environmental Factors

Factor Value Unit
successional inoculation on glass slides Phototrophic species were inoculated sequentially to construct a synthetic periphytic biofilm. N/A
  • PMID:35869094 - SUPPORT (IN_VITRO)
    "we rationally developed a workflow to construct a synthetic community by co-culturing 26 phototrophic species (i.e., diatoms, green algae, and cyanobacteria)"