pe

CultureMech:000387 bacterial COMPLEX LIQUID
Original name: PE

Overview

External ontology
mediadive.medium:C74 (source link unavailable) — PE
Applications
  • Microbial cultivation
Notes
Source: CCAP | Link: https://www.ccap.ac.uk/wp-content/uploads/MR_PE.pdf

Composition

flowchart LR
    CultureMech_000387["pe"]
    ing0_Natural_sea_water["Natural sea water"]
    CultureMech_000387 --> ing0_Natural_sea_water
    ing1_Soil["Soil"]
    CultureMech_000387 --> ing1_Soil
    ing2_NaNO3["NaNO3"]
    CultureMech_000387 --> ing2_NaNO3
    CHEBI_63005["CHEBI:63005"]
    ing2_NaNO3 -.-> CHEBI_63005
    ing3_Na2HPO4["Na2HPO4"]
    CultureMech_000387 --> ing3_Na2HPO4
    CHEBI_34683["CHEBI:34683"]
    ing3_Na2HPO4 -.-> CHEBI_34683

Ingredients (4)

# Ingredient Concentration Ontology Notes
1 Natural sea water 950 G_PER_L
2 Soil variable VARIABLE
3 NaNO3
NO3.Na 84.994 g/mol
200 G_PER_L CHEBI:63005
sodium nitrate
4 Na2HPO4
HO4P.2Na 141.958 g/mol
2 G_PER_L CHEBI:34683
disodium hydrogenphosphate

Preparation

  1. Filter natural seawater and reduce to 95% using glass distilled water. Autoclave.
  2. Ingredients above should be autoclaved separately and added together cold using aseptic techniques. Sterilise for 15 minutes at 15 psi and use when cooled to room temperature.
  3. Site selection for a good soil is very important and for most purposes a soil from undisturbed deciduous woodland is best. Sites to avoid are those showing obvious signs of man's activity and particular care should be taken to avoid areas where fertilizers, crop sprays or other toxic chemicals may have been used.
  4. A rich loam with good crumb structure should be sought. Stones, roots and larger invertebrates should be removed during an initial sieving through a 1 cm mesh. The sieved soil should be spread to air dry and handpicked for smaller invertebrates and roots. It should be turned periodically and picked over again. When dry sieve through a finer mesh (2-4 mm) and store in an airtight container away from light and heat.
  5. Soil is prepared as above. Air­-dried soil and twice its volume of supernatant distilled water are autoclaved together at 15 psi for 2 hours and left to cool. The supernatant is then decanted and filtered through Whatman No 1 filter paper, then distributed to containers in volumes suitable for making up batches of media. The aliquots and their containers are autoclaved for an appropriate length of time (e.g. 1 litre or less for 15 minutes) and are then kept in a cool place (e.g. a refrigerator) until required.

Target organisms

No target organisms are recorded.

Provenance

Merged from 1 source record.

TimestampCuratorActionNotes
2026-01-26T17:53:19.728984Z mediadive-import Imported from MediaDive Source: CCAP, ID: C74
2026-02-03T00:00:00+00:00 schema-defaulter-v1.0 Applied schema defaults and normalizations Added default concentration for ingredient: Soil
2026-03-13T06:18:54.892983Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:000387
2026-03-17T06:30:32.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:05.903121+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "PE" to "pe" for consistent matching
2026-05-16T09:04:28.483573+00:00 migrate_legacy_fields.py MIGRATED_LEGACY_FIELDS curation_history.date->timestamp=1
2026-06-05T07:41:41.009529+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 1 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-08-06T03:05:52.341658+00:00 merge_recipes.py MERGED_RECIPES merged 1 source recipe(s) on fingerprint 08f2ca87afc1631ef96ba173f10c5a29114290a1b88cd3ea91ea57eeaba40bf6