sbbm

CultureMech:000403 bacterial COMPLEX SOLID_AGAR
Original name: SBBM

Overview

External ontology
mediadive.medium:C89 (source link unavailable) — SBBM
Applications
  • Microbial cultivation
Notes
Source: CCAP | Link: https://www.ccap.ac.uk/wp-content/uploads/MR_SBBM.pdf

Composition

flowchart LR
    CultureMech_000403["sbbm"]
    ing0_NaNO3["NaNO3"]
    CultureMech_000403 --> ing0_NaNO3
    CHEBI_63005["CHEBI:63005"]
    ing0_NaNO3 -.-> CHEBI_63005
    ing1_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
    CultureMech_000403 --> ing1_CaCl2_x_2_H2O
    CHEBI_86158["CHEBI:86158"]
    ing1_CaCl2_x_2_H2O -.-> CHEBI_86158
    ing2_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
    CultureMech_000403 --> ing2_MgSO4_x_7_H2O
    CHEBI_31795["CHEBI:31795"]
    ing2_MgSO4_x_7_H2O -.-> CHEBI_31795
    ing3_K2HPO4_x_3_H2O["K2HPO4 x 3 H2O"]
    CultureMech_000403 --> ing3_K2HPO4_x_3_H2O
    CHEBI_131527["CHEBI:131527"]
    ing3_K2HPO4_x_3_H2O -.-> CHEBI_131527
    ing4_KH2PO4["KH2PO4"]
    CultureMech_000403 --> ing4_KH2PO4
    CHEBI_63036["CHEBI:63036"]
    ing4_KH2PO4 -.-> CHEBI_63036
    ing5_NaCl["NaCl"]
    CultureMech_000403 --> ing5_NaCl
    CHEBI_26710["CHEBI:26710"]
    ing5_NaCl -.-> CHEBI_26710
    ing6_Agar["Agar"]
    CultureMech_000403 --> ing6_Agar
    CHEBI_2509["CHEBI:2509"]
    ing6_Agar -.-> CHEBI_2509
    ing7_Thiamine_hydrochloride["Thiamine hydrochloride"]
    CultureMech_000403 --> ing7_Thiamine_hydrochloride
    CHEBI_49105["CHEBI:49105"]
    ing7_Thiamine_hydrochloride -.-> CHEBI_49105
    ing8_Na2_EDTA["Na2-EDTA"]
    CultureMech_000403 --> ing8_Na2_EDTA
    CHEBI_64734["CHEBI:64734"]
    ing8_Na2_EDTA -.-> CHEBI_64734
    ing9_FeCl3_x_6_H2O["FeCl3 x 6 H2O"]
    CultureMech_000403 --> ing9_FeCl3_x_6_H2O
    CHEBI_86254["CHEBI:86254"]
    ing9_FeCl3_x_6_H2O -.-> CHEBI_86254
    ing10_MnCl2_x_4_H2O["MnCl2 x 4 H2O"]
    CultureMech_000403 --> ing10_MnCl2_x_4_H2O
    CHEBI_86368["CHEBI:86368"]
    ing10_MnCl2_x_4_H2O -.-> CHEBI_86368
    ing11_ZnCl2["ZnCl2"]
    CultureMech_000403 --> ing11_ZnCl2
    CHEBI_49976["CHEBI:49976"]
    ing11_ZnCl2 -.-> CHEBI_49976
    ing12_CoCl2_x_6_H2O["CoCl2 x 6 H2O"]
    CultureMech_000403 --> ing12_CoCl2_x_6_H2O
    CHEBI_53503["CHEBI:53503"]
    ing12_CoCl2_x_6_H2O -.-> CHEBI_53503
    ing13_Na2_MoO4_x_2_H2O["Na2 MoO4 x 2 H2O"]
    CultureMech_000403 --> ing13_Na2_MoO4_x_2_H2O
    CHEBI_75213["CHEBI:75213"]
    ing13_Na2_MoO4_x_2_H2O -.-> CHEBI_75213
    ing14_Cyanocobalamine["Cyanocobalamine"]
    CultureMech_000403 --> ing14_Cyanocobalamine
    CHEBI_17439["CHEBI:17439"]
    ing14_Cyanocobalamine -.-> CHEBI_17439
    ing15_Soil["Soil"]
    CultureMech_000403 --> ing15_Soil
    ing16_Ca_NO3_2_x_4_H2O["Ca(NO3)2 x 4 H2O"]
    CultureMech_000403 --> ing16_Ca_NO3_2_x_4_H2O
    CHEBI_86159["CHEBI:86159"]
    ing16_Ca_NO3_2_x_4_H2O -.-> CHEBI_86159
    ing17_NaHCO3["NaHCO3"]
    CultureMech_000403 --> ing17_NaHCO3
    CHEBI_32139["CHEBI:32139"]
    ing17_NaHCO3 -.-> CHEBI_32139
    ing18_Na2HPO4_x_12_H2O["Na2HPO4 x 12 H2O"]
    CultureMech_000403 --> ing18_Na2HPO4_x_12_H2O
    CHEBI_34683["CHEBI:34683"]
    ing18_Na2HPO4_x_12_H2O -.-> CHEBI_34683
    ing19_FeNa_EDTA["FeNa-EDTA"]
    CultureMech_000403 --> ing19_FeNa_EDTA
    ing20_H3BO3["H3BO3"]
    CultureMech_000403 --> ing20_H3BO3
    CHEBI_33118["CHEBI:33118"]
    ing20_H3BO3 -.-> CHEBI_33118
    ing21__NH4_6Mo7O24_x_4_H2O["(NH4)6Mo7O24 x 4 H2O"]
    CultureMech_000403 --> ing21__NH4_6Mo7O24_x_4_H2O
    CHEBI_91249["CHEBI:91249"]
    ing21__NH4_6Mo7O24_x_4_H2O -.-> CHEBI_91249
    ing22_Thiamine_HCl["Thiamine HCl"]
    CultureMech_000403 --> ing22_Thiamine_HCl
    ing22_Thiamine_HCl -.-> CHEBI_49105
    ing23_Biotine["Biotine"]
    CultureMech_000403 --> ing23_Biotine
    CHEBI_15956["CHEBI:15956"]
    ing23_Biotine -.-> CHEBI_15956

Ingredients (24)

# Ingredient Concentration Ontology Notes
1 NaNO3
NO3.Na 84.994 g/mol
10.7 G_PER_L CHEBI:63005
sodium nitrate
[Merged 2 duplicates: 10.0, 0.7]
2 CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
10 G_PER_L CHEBI:86158
calcium chloride dihydrate
3 MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
10.7 G_PER_L CHEBI:31795
magnesium sulfate heptahydrate
[Merged 2 duplicates: 10.0, 0.7]
4 K2HPO4 x 3 H2O
HO4P.2K 174.174 g/mol
10 G_PER_L CHEBI:131527
dipotassium hydrogen phosphate
5 KH2PO4
H2O4P.K 136.084 g/mol
25.037999999999997 G_PER_L CHEBI:63036
potassium dihydrogen phosphate
[Merged 2 duplicates: 23.4, 1.638]
6 NaCl
Cl.Na 58.443 g/mol
10 G_PER_L CHEBI:26710
sodium chloride
7 Agar 30.0 G_PER_L CHEBI:2509
agar
(for solid medium) [Merged 2 duplicates: 15.0, 15.0]
8 Thiamine hydrochloride
C12H17N4OS.Cl.HCl 337.276 g/mol
1.2 G_PER_L CHEBI:49105
thiamine hydrochloride
9 Na2-EDTA
C10H14N2O8.2Na 336.208 g/mol
3.0 G_PER_L CHEBI:64734
EDTA disodium salt (anhydrous)
[Merged 2 duplicates: 0.75, 2.25]
10 FeCl3 x 6 H2O
Cl3Fe.6H2O 270.294 g/mol
0.097 G_PER_L CHEBI:86254
iron trichloride hexahydrate
11 MnCl2 x 4 H2O
Cl2Mn.4H2O 197.904 g/mol
1.4309999999999998 G_PER_L CHEBI:86368
manganese(II) chloride tetrahydrate
[Merged 2 duplicates: 0.041, 1.39]
12 ZnCl2
2Cl.Zn 136.296 g/mol
0.005 G_PER_L CHEBI:49976
zinc dichloride
13 CoCl2 x 6 H2O
2Cl.Co.6H2O 237.929 g/mol
0.002 G_PER_L CHEBI:53503
cobalt chloride hexahydrate
14 Na2 MoO4 x 2 H2O
2H2O.MoO4.2Na 241.946 g/mol
0.004 G_PER_L CHEBI:75213
sodium molybdate dihydrate
15 Cyanocobalamine
C63H88CoN14O14P 1355.388 g/mol
1.04 G_PER_L CHEBI:17439
cyanocob(III)alamin
[Merged 2 duplicates: 1.0, 0.04]
16 Soil 159.091 G_PER_L
17 Ca(NO3)2 x 4 H2O
Ca.4H2O.2NO3 236.146 g/mol
0.7 G_PER_L CHEBI:86159
calcium nitrate tetrahydrate
18 NaHCO3
CHO3.Na 84.006 g/mol
0.7 G_PER_L CHEBI:32139
sodium hydrogencarbonate
19 Na2HPO4 x 12 H2O
HO4P.2Na 141.958 g/mol
0.7 G_PER_L CHEBI:34683
disodium hydrogenphosphate
20 FeNa-EDTA 2.25 G_PER_L
21 H3BO3
H3BO3 61.833 g/mol
2.48 G_PER_L CHEBI:33118
boric acid
22 (NH4)6Mo7O24 x 4 H2O
2H4N.MoO4 196.014 g/mol
1 G_PER_L CHEBI:91249
ammonium molybdate
23 Thiamine HCl
C12H17N4OS.Cl.HCl 337.276 g/mol
0.04 G_PER_L CHEBI:49105
thiamine hydrochloride
24 Biotine
C10H16N2O3S 244.316 g/mol
0.04 G_PER_L CHEBI:15956
biotin

Preparation

  1. Used for some filamentous green algae e.g. Trentepohlia, can give better growth than 3N-BBM+V (Mail sol. C 14) or JM:SE (Mail sol. C 41). Make both media and sterilise, then mix aseptically in the ratio of 97% 3N-BBM+V and 3% SE2.
  2. Once elements are dissolved autoclave at 15 psi for 15 minutes.
  3. Make up to 1 litre with distilled water. For agar add 15 g per litre Bacterialogical Agar. Autoclave at 15 psi for 15 minutes.
  4. Filter sterile
  5. Ensure elements are added in the following sequence:
  6. Once elements are dissolved autoclave at 15 psi for 15 minutes.
  7. Take 1 ml of this solution and add 99 ml Deionised water. Filter sterile.
  8. Site selection for a good soil is very important and for most purposes a soil from undisturbed deciduous woodland is best. Sites to avoid are those showing obvious signs of man's activity and particular care should be taken to avoid areas where fertilizers, crop sprays or other toxic chemicals may have been used.
  9. A rich loam with good crumb structure should be sought. Stones, roots and larger invertebrates should be removed during an initial sieving through a 1 cm mesh. The sieved soil should be spread to air dry and hand picked for smaller invertebrates and roots. It should be turned periodically and picked over again. When dry it may be sieved through a finer mesh (2­4 mm) or stored as it is prior to use.
  10. Soil is prepared as above. 105 g of air­dried sieved soil and 660 ml of deionized water are placed in a 1 litre bottle and autoclaved once at 15 psi for 15 minutes, then again after 24 hours. The contents of the bottle are left to settle (usually for at least a week) and then the supernatant is decanted and filtered. The final pH should be 7.0 - 8.0.
  11. This recipe is a 7:3 mixture of JM and SE2. Make up to 1 litre with deionized water. For agar, add 15.0 g per litre of Bacteriological Agar (Thermo Scientific™ Oxoid™ Agar No.1). Autoclave at 15 psi for 15 minutes.
  12. Site selection for a good soil is very important and for most purposes a soil from undisturbed deciduous woodland is best. Sites to avoid are those showing obvious signs of man's activity and particular care should be taken to avoid areas where fertilizers, crop sprays or other toxic chemicals may have been used.
  13. A rich loam with good crumb structure should be sought. Stones, roots and larger invertebrates should be removed during an initial sieving through a 1 cm mesh. The sieved soil should be spread to air dry and handpicked for smaller invertebrates and roots. It should be turned periodically and picked over again. When dry sieve through a finer mesh (2-4 mm) and store in an airtight container away from light and heat.
  14. Soil is prepared as above. Air-dried soil and twice its volume of supernatant distilled water are autoclaved together at 15 psi for 2 hours and left to cool. The supernatant is then decanted and then distributed to containers in volumes suitable for making up batches of media. The aliquots and their containers are autoclaved for an appropriate length of time (e.g. 1 litre or less for 15 minutes) and are then kept in a cool place (e.g. a refrigerator) until required.

Target organisms

No target organisms are recorded.

Provenance

Merged from 1 source record.

TimestampCuratorActionNotes
2026-01-26T17:53:19.770868Z mediadive-import Imported from MediaDive Source: CCAP, ID: C89
2026-02-03T00:00:00+00:00 schema-defaulter-v1.0 Applied schema defaults and normalizations Added default concentration for ingredient: Soil
2026-03-13T03:09:02.914436Z data-quality-cleanup-v1.0 Data quality fixes Merged 8 duplicate ingredient(s)
2026-03-13T06:18:54.971456Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:000403
2026-03-17T06:30:08.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:05.983314+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "SBBM" to "sbbm" for consistent matching
2026-05-16T09:04:31.357282+00:00 migrate_legacy_fields.py MIGRATED_LEGACY_FIELDS curation_history.date->timestamp=1
2026-06-05T07:41:45.331640+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 20 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:47:11.319172+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 4 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.
2026-08-06T03:05:55.352914+00:00 merge_recipes.py MERGED_RECIPES merged 1 source recipe(s) on fingerprint 5f1fe166534010c9809cff10339cdec99424ba9f2bd8b8f4bdbc6342cd5d6e59