clostridium_viride_medium

CultureMech:001657 bacterial COMPLEX LIQUID
Original name: CLOSTRIDIUM VIRIDE MEDIUM

Overview

External ontology
mediadive.medium:526 (source link unavailable) — CLOSTRIDIUM VIRIDE MEDIUM
Applications
  • Microbial cultivation
pH range
{'min': 7.6, 'max': 7.8}
Notes
Source: DSMZ | Link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium526.pdf

Composition

flowchart LR
    CultureMech_001657["clostridium_viride_medium"]
    ing0_5_Aminovaleric_acid["5-Aminovaleric acid"]
    CultureMech_001657 --> ing0_5_Aminovaleric_acid
    CHEBI_15887["CHEBI:15887"]
    ing0_5_Aminovaleric_acid -.-> CHEBI_15887
    ing1_K2HPO4["K2HPO4"]
    CultureMech_001657 --> ing1_K2HPO4
    CHEBI_131527["CHEBI:131527"]
    ing1_K2HPO4 -.-> CHEBI_131527
    ing2_Yeast_extract["Yeast extract"]
    CultureMech_001657 --> ing2_Yeast_extract
    ing3_Sodium_resazurin["Sodium resazurin"]
    CultureMech_001657 --> ing3_Sodium_resazurin
    CHEBI_8806["CHEBI:8806"]
    ing3_Sodium_resazurin -.-> CHEBI_8806
    ing4_NaHCO3["NaHCO3"]
    CultureMech_001657 --> ing4_NaHCO3
    CHEBI_32139["CHEBI:32139"]
    ing4_NaHCO3 -.-> CHEBI_32139
    ing5_L_Cysteine_HCl_x_H2O["L-Cysteine HCl x H2O"]
    CultureMech_001657 --> ing5_L_Cysteine_HCl_x_H2O
    CHEBI_91248["CHEBI:91248"]
    ing5_L_Cysteine_HCl_x_H2O -.-> CHEBI_91248
    ing6_Nitrilotriacetic_acid["Nitrilotriacetic acid"]
    CultureMech_001657 --> ing6_Nitrilotriacetic_acid
    CHEBI_44557["CHEBI:44557"]
    ing6_Nitrilotriacetic_acid -.-> CHEBI_44557
    ing7_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
    CultureMech_001657 --> ing7_MgSO4_x_7_H2O
    CHEBI_31795["CHEBI:31795"]
    ing7_MgSO4_x_7_H2O -.-> CHEBI_31795
    ing8_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
    CultureMech_001657 --> ing8_CaCl2_x_2_H2O
    CHEBI_86158["CHEBI:86158"]
    ing8_CaCl2_x_2_H2O -.-> CHEBI_86158
    ing9_FeSO4_x_7_H2O["FeSO4 x 7 H2O"]
    CultureMech_001657 --> ing9_FeSO4_x_7_H2O
    CHEBI_75836["CHEBI:75836"]
    ing9_FeSO4_x_7_H2O -.-> CHEBI_75836
    ing10_NiCl2_x_6_H2O["NiCl2 x 6 H2O"]
    CultureMech_001657 --> ing10_NiCl2_x_6_H2O
    CHEBI_34887["CHEBI:34887"]
    ing10_NiCl2_x_6_H2O -.-> CHEBI_34887
    ing11_ZnSO4_x_7_H2O["ZnSO4 x 7 H2O"]
    CultureMech_001657 --> ing11_ZnSO4_x_7_H2O
    CHEBI_32312["CHEBI:32312"]
    ing11_ZnSO4_x_7_H2O -.-> CHEBI_32312
    ing12_MnSO4_x_H2O["MnSO4 x H2O"]
    CultureMech_001657 --> ing12_MnSO4_x_H2O
    CHEBI_86364["CHEBI:86364"]
    ing12_MnSO4_x_H2O -.-> CHEBI_86364
    ing13_CoCl2_x_6_H2O["CoCl2 x 6 H2O"]
    CultureMech_001657 --> ing13_CoCl2_x_6_H2O
    CHEBI_53503["CHEBI:53503"]
    ing13_CoCl2_x_6_H2O -.-> CHEBI_53503
    ing14_VOSO4_x_5_H2O["VOSO4 x 5 H2O"]
    CultureMech_001657 --> ing14_VOSO4_x_5_H2O
    CHEBI_132758["CHEBI:132758"]
    ing14_VOSO4_x_5_H2O -.-> CHEBI_132758
    ing15_Na2MoO4_x_2_H2O["Na2MoO4 x 2 H2O"]
    CultureMech_001657 --> ing15_Na2MoO4_x_2_H2O
    CHEBI_75213["CHEBI:75213"]
    ing15_Na2MoO4_x_2_H2O -.-> CHEBI_75213
    ing16_CuSO4_x_5_H2O["CuSO4 x 5 H2O"]
    CultureMech_001657 --> ing16_CuSO4_x_5_H2O
    CHEBI_31440["CHEBI:31440"]
    ing16_CuSO4_x_5_H2O -.-> CHEBI_31440

Ingredients (17)

# Ingredient Concentration Ontology Notes
1 5-Aminovaleric acid
C5H11NO2 117.148 g/mol
15 G_PER_L CHEBI:15887
5-aminopentanoic acid
2 K2HPO4
HO4P.2K 174.174 g/mol
8.7 G_PER_L CHEBI:131527
dipotassium hydrogen phosphate
3 Yeast extract 7.5 G_PER_L
4 Sodium resazurin
C12H7NO4 229.191 g/mol
0.0005 G_PER_L CHEBI:8806
Resazurin
5 NaHCO3
CHO3.Na 84.006 g/mol
2.5 G_PER_L CHEBI:32139
sodium hydrogencarbonate
6 L-Cysteine HCl x H2O
C3H7NO2S.H2O.HCl 175.637 g/mol
0.25 G_PER_L CHEBI:91248
L-cysteine hydrochloride hydrate
7 Nitrilotriacetic acid
C6H9NO6 191.139 g/mol
5 G_PER_L CHEBI:44557
nitrilotriacetic acid
8 MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
24 G_PER_L CHEBI:31795
magnesium sulfate heptahydrate
9 CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
0.5 G_PER_L CHEBI:86158
calcium chloride dihydrate
10 FeSO4 x 7 H2O
Fe.7H2O.O4S 278.013 g/mol
0.5 G_PER_L CHEBI:75836
iron(2+) sulfate heptahydrate
11 NiCl2 x 6 H2O
Cl2Ni 129.599 g/mol
0.25 G_PER_L CHEBI:34887
nickel dichloride
12 ZnSO4 x 7 H2O
7H2O.O4S.Zn 287.558 g/mol
0.44 G_PER_L CHEBI:32312
zinc sulfate heptahydrate
13 MnSO4 x H2O
H2O.Mn.O4S 169.016 g/mol
0.25 G_PER_L CHEBI:86364
manganese(II) sulfate monohydrate
14 CoCl2 x 6 H2O
2Cl.Co.6H2O 237.929 g/mol
0.25 G_PER_L CHEBI:53503
cobalt chloride hexahydrate
15 VOSO4 x 5 H2O
5H2O.O4S.OV 253.081 g/mol
0.25 G_PER_L CHEBI:132758
vanadyl sulfate pentahydrate
16 Na2MoO4 x 2 H2O
2H2O.MoO4.2Na 241.946 g/mol
0.25 G_PER_L CHEBI:75213
sodium molybdate dihydrate
17 CuSO4 x 5 H2O
Cu.5H2O.O4S 249.684 g/mol
0.12 G_PER_L CHEBI:31440
copper(II) sulfate pentahydrate

Preparation

  1. Dissolve ingredients (except bicarbonate and cysteine), adjust pH to 7.0 with NaOH and sparge medium with 80% N2 and 20% CO2 gas mixture for 30 - 45 min. Add and dissolve solid bicarbonate and cysteine, dispense medium under same gas atmosphere into anoxic Hungate-type tubes or serum vials and autoclave. After autoclaving adjust pH of medium to 7.6 - 7.8 using a sterile anoxic stock solution of Na2CO3 (5% w/v) prepared under 80% N2 and 20% CO2 gas atmosphere.
  2. Dissolve mineral salts in 700 ml water acidified with 2 ml of conc. HCl. Separately dissolve 5.00 g of NTA in 300 ml water add 10 N NaOH until all the NTA has dissolved and the pH is 7.0. While stirring, slowly add the NTA solution to the salt solution. Stir until the solution is almost clear. Store cool and dark.

Target organisms

No target organisms are recorded.

Provenance

Merged from 1 source record.

TimestampCuratorActionNotes
2026-01-26T17:53:11.534584Z mediadive-import Imported from MediaDive Source: DSMZ, ID: 526
2026-03-13T06:19:06.255000Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:001657
2026-03-17T06:29:43.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:18.432722+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "CLOSTRIDIUM VIRIDE MEDIUM" to "clostridium_viride_medium" for consistent matching
2026-05-20T06:01:12.249672+00:00 migrate_ph_range.py MIGRATED_PH_RANGE ph_range '7.6-7.8' -> {'min': 7.6, 'max': 7.8}
2026-06-05T07:40:54.479887+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 15 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:46:54.905810+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.
2026-08-06T03:05:28.852320+00:00 merge_recipes.py MERGED_RECIPES merged 1 source recipe(s) on fingerprint ff4c85b2dca401857269a45cfb7c7913bb3ef2f574659dbe703a8325794beae4