modified_sulfate_reducing_bacteria_medium

CultureMech:002714 bacterial COMPLEX LIQUID
Original name: MODIFIED SULFATE REDUCING BACTERIA MEDIUM

Overview

External ontology
mediadive.medium:J354 (source link unavailable) — MODIFIED SULFATE REDUCING BACTERIA MEDIUM
Applications
  • Microbial cultivation
pH
6.7
Notes
Source: JCM | Link: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=354

Composition

flowchart LR
    CultureMech_002714["modified_sulfate_reducing_bacteria_medium"]
    ing0_NaCl["NaCl"]
    CultureMech_002714 --> ing0_NaCl
    CHEBI_26710["CHEBI:26710"]
    ing0_NaCl -.-> CHEBI_26710
    ing1_MgCl2_x_6_H2O["MgCl2 x 6 H2O"]
    CultureMech_002714 --> ing1_MgCl2_x_6_H2O
    CHEBI_86345["CHEBI:86345"]
    ing1_MgCl2_x_6_H2O -.-> CHEBI_86345
    ing2_Na2SO4["Na2SO4"]
    CultureMech_002714 --> ing2_Na2SO4
    CHEBI_32149["CHEBI:32149"]
    ing2_Na2SO4 -.-> CHEBI_32149
    ing3_KH2PO4["KH2PO4"]
    CultureMech_002714 --> ing3_KH2PO4
    CHEBI_63036["CHEBI:63036"]
    ing3_KH2PO4 -.-> CHEBI_63036
    ing4_KCl["KCl"]
    CultureMech_002714 --> ing4_KCl
    CHEBI_32588["CHEBI:32588"]
    ing4_KCl -.-> CHEBI_32588
    ing5_NH4Cl["NH4Cl"]
    CultureMech_002714 --> ing5_NH4Cl
    CHEBI_31206["CHEBI:31206"]
    ing5_NH4Cl -.-> CHEBI_31206
    ing6_PIPES["PIPES"]
    CultureMech_002714 --> ing6_PIPES
    CHEBI_39033["CHEBI:39033"]
    ing6_PIPES -.-> CHEBI_39033
    ing7_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
    CultureMech_002714 --> ing7_CaCl2_x_2_H2O
    CHEBI_86158["CHEBI:86158"]
    ing7_CaCl2_x_2_H2O -.-> CHEBI_86158
    ing8_Tryptone["Tryptone"]
    CultureMech_002714 --> ing8_Tryptone
    ing9_Sodium_acetate["Sodium acetate"]
    CultureMech_002714 --> ing9_Sodium_acetate
    CHEBI_32954["CHEBI:32954"]
    ing9_Sodium_acetate -.-> CHEBI_32954
    ing10_Na2WO4_x_2_H2O["Na2WO4 x 2 H2O"]
    CultureMech_002714 --> ing10_Na2WO4_x_2_H2O
    CHEBI_63939["CHEBI:63939"]
    ing10_Na2WO4_x_2_H2O -.-> CHEBI_63939
    ing11_Na2SeO4["Na2SeO4"]
    CultureMech_002714 --> ing11_Na2SeO4
    CHEBI_77775["CHEBI:77775"]
    ing11_Na2SeO4 -.-> CHEBI_77775
    ing12_Vitamin_B12["Vitamin B12"]
    CultureMech_002714 --> ing12_Vitamin_B12
    CHEBI_176843["CHEBI:176843"]
    ing12_Vitamin_B12 -.-> CHEBI_176843
    ing13_Resazurin["Resazurin"]
    CultureMech_002714 --> ing13_Resazurin
    CHEBI_8806["CHEBI:8806"]
    ing13_Resazurin -.-> CHEBI_8806
    ing14_Na2S_x_9_H2O["Na2S x 9 H2O"]
    CultureMech_002714 --> ing14_Na2S_x_9_H2O
    CHEBI_76209["CHEBI:76209"]
    ing14_Na2S_x_9_H2O -.-> CHEBI_76209
    ing15_Biotin["Biotin"]
    CultureMech_002714 --> ing15_Biotin
    CHEBI_15956["CHEBI:15956"]
    ing15_Biotin -.-> CHEBI_15956
    ing16_Folic_acid["Folic acid"]
    CultureMech_002714 --> ing16_Folic_acid
    CHEBI_27470["CHEBI:27470"]
    ing16_Folic_acid -.-> CHEBI_27470
    ing17_Pyridoxine_hydrochloride["Pyridoxine hydrochloride"]
    CultureMech_002714 --> ing17_Pyridoxine_hydrochloride
    CHEBI_30961["CHEBI:30961"]
    ing17_Pyridoxine_hydrochloride -.-> CHEBI_30961
    ing18_Thiamine_HCl["Thiamine HCl"]
    CultureMech_002714 --> ing18_Thiamine_HCl
    CHEBI_49105["CHEBI:49105"]
    ing18_Thiamine_HCl -.-> CHEBI_49105
    ing19_Riboflavin["Riboflavin"]
    CultureMech_002714 --> ing19_Riboflavin
    CHEBI_17015["CHEBI:17015"]
    ing19_Riboflavin -.-> CHEBI_17015
    ing20_Nicotinic_acid["Nicotinic acid"]
    CultureMech_002714 --> ing20_Nicotinic_acid
    CHEBI_15940["CHEBI:15940"]
    ing20_Nicotinic_acid -.-> CHEBI_15940
    ing21_Calcium_pantothenate["Calcium pantothenate"]
    CultureMech_002714 --> ing21_Calcium_pantothenate
    CHEBI_31345["CHEBI:31345"]
    ing21_Calcium_pantothenate -.-> CHEBI_31345
    ing22_p_Aminobenzoic_acid["p-Aminobenzoic acid"]
    CultureMech_002714 --> ing22_p_Aminobenzoic_acid
    CHEBI_30753["CHEBI:30753"]
    ing22_p_Aminobenzoic_acid -.-> CHEBI_30753
    ing23_Lipoic_acid["Lipoic acid"]
    CultureMech_002714 --> ing23_Lipoic_acid
    CHEBI_16494["CHEBI:16494"]
    ing23_Lipoic_acid -.-> CHEBI_16494

Ingredients (24)

# Ingredient Concentration Ontology Notes
1 NaCl
Cl.Na 58.443 g/mol
19.802 G_PER_L CHEBI:26710
sodium chloride
2 MgCl2 x 6 H2O
2Cl.6H2O.Mg 203.301 g/mol
2.9703 G_PER_L CHEBI:86345
magnesium dichloride hexahydrate
3 Na2SO4
2Na.O4S 142.043 g/mol
3.9604 G_PER_L CHEBI:32149
sodium sulfate
4 KH2PO4
H2O4P.K 136.084 g/mol
0.19802 G_PER_L CHEBI:63036
potassium dihydrogen phosphate
5 KCl
Cl.K 74.551 g/mol
0.49505 G_PER_L CHEBI:32588
potassium chloride
6 NH4Cl
Cl.H4N 53.492 g/mol
0.247525 G_PER_L CHEBI:31206
ammonium chloride
7 PIPES 3.42574 G_PER_L CHEBI:39033
PIPES
8 CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
0.148515 G_PER_L CHEBI:86158
calcium chloride dihydrate
9 Tryptone 0.49505 G_PER_L
10 Sodium acetate
C2H3O2.Na 82.034 g/mol
0.164356 G_PER_L CHEBI:32954
sodium acetate
11 Na2WO4 x 2 H2O
2H2O.2Na.O4W 329.846 g/mol
0.0019802 G_PER_L CHEBI:63939
sodium tungstate dihydrate
12 Na2SeO4
2Na.O4Se 188.936 g/mol
0.00049505 G_PER_L CHEBI:77775
sodium selenate
13 Vitamin B12 0.0001495049 G_PER_L CHEBI:176843
vitamin B12
[Merged 2 duplicates: 4.95049e-05, 0.0001]
14 Resazurin
C12H7NO4 229.191 g/mol
0.000990099 G_PER_L CHEBI:8806
Resazurin
15 Na2S x 9 H2O
9H2O.2Na.S 240.182 g/mol
0.49505 G_PER_L CHEBI:76209
sodium sulfide nonahydrate
16 Biotin
C10H16N2O3S 244.316 g/mol
0.002 G_PER_L CHEBI:15956
biotin
17 Folic acid
C19H19N7O6 441.404 g/mol
0.002 G_PER_L CHEBI:27470
folic acid
18 Pyridoxine hydrochloride
C8H11NO3.HCl 205.641 g/mol
0.01 G_PER_L CHEBI:30961
pyridoxine hydrochloride
19 Thiamine HCl
C12H17N4OS.Cl.HCl 337.276 g/mol
0.005 G_PER_L CHEBI:49105
thiamine hydrochloride
20 Riboflavin
C17H20N4O6 376.369 g/mol
0.005 G_PER_L CHEBI:17015
riboflavin
21 Nicotinic acid
C6H5NO2 123.111 g/mol
0.005 G_PER_L CHEBI:15940
nicotinic acid
22 Calcium pantothenate
2C9H16NO5.Ca 476.536 g/mol
0.005 G_PER_L CHEBI:31345
Calcium pantothenate
23 p-Aminobenzoic acid
C7H7NO2 137.138 g/mol
0.005 G_PER_L CHEBI:30753
4-aminobenzoic acid
24 Lipoic acid
C8H14O2S2 206.332 g/mol
0.005 G_PER_L CHEBI:16494
lipoic acid

Preparation

  1. Mix ingredients, except Na2S x 9H2O, and adjust pH to 6.7 with HCl. After autoclaving under a N2 atmosphere, distribute the medium into sterile culture vessels (e.g., 20 ml of the medium in 120 ml serum bottles) under a stream of H2-CO2 (4:1, v/v) gas mixture and seal with butyl rubber stoppers. Neutralize 5% Na2S x 9H2O solution, and autoclave under a N2 atmosphere. Prior to inoculation, add the sterile Na2S x 9H2O solution to the medium. Pressurize the inoculated vessels to 200 kPa H2-CO2 (4:1, v/v).

Target organisms

No target organisms are recorded.

Provenance

Merged from 1 source record.

TimestampCuratorActionNotes
2026-01-26T17:53:16.372936Z mediadive-import Imported from MediaDive Source: JCM, ID: J354
2026-03-13T03:08:46.365236Z data-quality-cleanup-v1.0 Data quality fixes Merged 1 duplicate ingredient(s)
2026-03-13T06:19:15.189507Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:002714
2026-03-17T06:29:49.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:28.552123+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "MODIFIED SULFATE REDUCING BACTERIA MEDIUM" to "modified_sulfate_reducing_bacteria_medium" for consistent matching
2026-06-05T07:41:37.804060+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 22 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:37:35.660338+00:00 primary-term-regrounding-v1.0 Re-grounded wrong primary term id (OAK-verified) 1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.
2026-06-10T07:47:08.960623+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 4 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.
2026-08-06T03:05:49.846960+00:00 merge_recipes.py MERGED_RECIPES merged 1 source recipe(s) on fingerprint 0c45301ed810ee8a4fa7435307617aee9e54ce09b345c540e9ec40f814aac4b1