halosarcina_pallida_medium

CultureMech:002991 archaea COMPLEX LIQUID
Original name: HALOSARCINA PALLIDA MEDIUM

Overview

External ontology
mediadive.medium:J645 (source link unavailable) — HALOSARCINA PALLIDA MEDIUM
Applications
  • Microbial cultivation
Synonyms
  • {'name': 'halobacteria_hmd_medium', 'source': 'MediaDive', 'source_id': 'mediadive.medium:J878', 'original_category': 'archaea'}
pH
6.5
High-metal flag
True
Notes
Source: JCM | Link: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=645

Composition

flowchart LR
    CultureMech_002991["halosarcina_pallida_medium"]
    ing0_MgCl2_x_6_H2O["MgCl2 x 6 H2O"]
    CultureMech_002991 --> ing0_MgCl2_x_6_H2O
    CHEBI_86345["CHEBI:86345"]
    ing0_MgCl2_x_6_H2O -.-> CHEBI_86345
    ing1_K2SO4_x_7_H2O["K2SO4 x 7 H2O"]
    CultureMech_002991 --> ing1_K2SO4_x_7_H2O
    CHEBI_32036["CHEBI:32036"]
    ing1_K2SO4_x_7_H2O -.-> CHEBI_32036
    ing2_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
    CultureMech_002991 --> ing2_CaCl2_x_2_H2O
    CHEBI_86158["CHEBI:86158"]
    ing2_CaCl2_x_2_H2O -.-> CHEBI_86158
    ing3_NH4Cl["NH4Cl"]
    CultureMech_002991 --> ing3_NH4Cl
    CHEBI_31206["CHEBI:31206"]
    ing3_NH4Cl -.-> CHEBI_31206
    ing4_KH2PO4["KH2PO4"]
    CultureMech_002991 --> ing4_KH2PO4
    CHEBI_63036["CHEBI:63036"]
    ing4_KH2PO4 -.-> CHEBI_63036
    ing5_Yeast_extract["Yeast extract"]
    CultureMech_002991 --> ing5_Yeast_extract
    ing6_Casamino_acids["Casamino acids"]
    CultureMech_002991 --> ing6_Casamino_acids
    ing7_NaCl["NaCl"]
    CultureMech_002991 --> ing7_NaCl
    CHEBI_26710["CHEBI:26710"]
    ing7_NaCl -.-> CHEBI_26710

Ingredients (8)

# Ingredient Concentration Ontology Notes
1 MgCl2 x 6 H2O
2Cl.6H2O.Mg 203.301 g/mol
20 G_PER_L CHEBI:86345
magnesium dichloride hexahydrate
2 K2SO4 x 7 H2O
2K.O4S 174.259 g/mol
5 G_PER_L CHEBI:32036
potassium sulfate
3 CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
0.1 G_PER_L CHEBI:86158
calcium chloride dihydrate
4 NH4Cl
Cl.H4N 53.492 g/mol
0.1 G_PER_L CHEBI:31206
ammonium chloride
5 KH2PO4
H2O4P.K 136.084 g/mol
0.05 G_PER_L CHEBI:63036
potassium dihydrogen phosphate
6 Yeast extract 0.1 G_PER_L
7 Casamino acids 0.5 G_PER_L
8 NaCl
Cl.Na 58.443 g/mol
180 G_PER_L CHEBI:26710
sodium chloride

Preparation

  1. Add components to distilled water and bring volume to 1.0 L. Adjust pH to 6.5 and autoclave.
  2. For preparation of solid medium, add 20.0 g/L agar.

Target organisms

No target organisms are recorded.

Provenance

Merged from 2 source records.

TimestampCuratorActionNotes
2026-01-26T17:53:17.175337Z mediadive-import Imported from MediaDive Source: JCM, ID: J645
2026-01-28T19:48:13.765785Z chebi-enrichment Added CHEBI ontology terms to ingredients Enriched using MicrobeMediaParam and MediaDive chemical mappings
2026-03-13T06:19:17.017559Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:002991
2026-03-17T06:29:54.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:30.650128+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "HALOSARCINA PALLIDA MEDIUM" to "halosarcina_pallida_medium" for consistent matching
2026-06-05T07:41:08.213885+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 7 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-08T23:19:39.793479+00:00 chebi-regrounding-v1.0 Corrected CHEBI ingredient grounding (audit G21/G22) Re-grounded 2 term reference(s) to the correct CHEBI (see reports/chebi_grounding_audit.md). Label-conditional fixes for pyridoxine/pyridoxamine, glycerol, MnSO4, Ca(NO3)2, selenate; casamino acids de-grounded (mixture, no single CHEBI).
2026-06-10T07:46:59.668488+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 3 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.
2026-08-06T03:04:28.691410+00:00 recipe-merger Merged 2 duplicate recipes into canonical record Sources: halobacteria_hmd_medium, halosarcina_pallida_medium
2026-08-06T03:04:28.691444+00:00 merge_recipes.py MERGED_RECIPES merged 2 source recipe(s) on fingerprint 34e868a11550f0e6f5ac4052cdff2902421903a6b8d3d5da39a48e21066faf9e