Overview
- External ontology
- mediadive.medium:J77 (source link unavailable) — GYP AGAR
- Applications
-
- Microbial cultivation
- pH
- 6.8
- Notes
- Source: JCM | Link: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=77
Composition
flowchart LR
CultureMech_003122["gyp_agar"]
ing0_Glucose["Glucose"]
CultureMech_003122 --> ing0_Glucose
CHEBI_17234["CHEBI:17234"]
ing0_Glucose -.-> CHEBI_17234
ing1_Yeast_extract["Yeast extract"]
CultureMech_003122 --> ing1_Yeast_extract
ing2_Peptone["Peptone"]
CultureMech_003122 --> ing2_Peptone
ing3_Sodium_acetate["Sodium acetate"]
CultureMech_003122 --> ing3_Sodium_acetate
CHEBI_32954["CHEBI:32954"]
ing3_Sodium_acetate -.-> CHEBI_32954
ing4_Agar["Agar"]
CultureMech_003122 --> ing4_Agar
CHEBI_2509["CHEBI:2509"]
ing4_Agar -.-> CHEBI_2509
ing5_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
CultureMech_003122 --> ing5_MgSO4_x_7_H2O
CHEBI_31795["CHEBI:31795"]
ing5_MgSO4_x_7_H2O -.-> CHEBI_31795
ing6_FeSO4_x_7_H2O["FeSO4 x 7 H2O"]
CultureMech_003122 --> ing6_FeSO4_x_7_H2O
CHEBI_75836["CHEBI:75836"]
ing6_FeSO4_x_7_H2O -.-> CHEBI_75836
ing7_MnSO4_x_n_H2O["MnSO4 x n H2O"]
CultureMech_003122 --> ing7_MnSO4_x_n_H2O
CHEBI_86360["CHEBI:86360"]
ing7_MnSO4_x_n_H2O -.-> CHEBI_86360
ing8_NaCl["NaCl"]
CultureMech_003122 --> ing8_NaCl
CHEBI_26710["CHEBI:26710"]
ing8_NaCl -.-> CHEBI_26710
Ingredients (9)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Glucose
C6H12O6 180.156 g/mol
|
39.604 G_PER_L |
CHEBI:17234
glucose
|
|
| 2 | Yeast extract | 19.802 G_PER_L | ||
| 3 | Peptone | 19.802 G_PER_L | ||
| 4 |
Sodium acetate
C2H3O2.Na 82.034 g/mol
|
19.802 G_PER_L |
CHEBI:32954
sodium acetate
|
|
| 5 | Agar | 14.8515 G_PER_L |
CHEBI:2509
agar
|
|
| 6 |
MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
|
40 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
|
| 7 |
FeSO4 x 7 H2O
Fe.7H2O.O4S 278.013 g/mol
|
2 G_PER_L |
CHEBI:75836
iron(2+) sulfate heptahydrate
|
|
| 8 |
MnSO4 x n H2O
Mn.O4S 151.001 g/mol
|
2 G_PER_L |
CHEBI:86360
manganese(II) sulfate
|
|
| 9 |
NaCl
Cl.Na 58.443 g/mol
|
2 G_PER_L |
CHEBI:26710
sodium chloride
|
Preparation
- Adjust pH to 6.8.
Target organisms
No target organisms are recorded.
Provenance
Merged from 1 source record.
- gyp_agar (CultureMech:003122)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-26T17:53:15.687534Z | mediadive-import | Imported from MediaDive | Source: JCM, ID: J77 |
| 2026-03-13T06:19:17.977410Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:003122 |
| 2026-03-17T06:30:24.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:31.771404+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "GYP AGAR" to "gyp_agar" for consistent matching |
| 2026-06-05T07:41:06.883025+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 6 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:46:59.229786+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-08-06T03:05:36.630451+00:00 | merge_recipes.py | MERGED_RECIPES | merged 1 source recipe(s) on fingerprint cca5a7e981e2acd08799fc15ea11afb29df9c8959791f3a7ecd6981d8e2a3c44 |