modified_biebl_and_pfennigs_medium

CultureMech:003657 bacterial COMPLEX LIQUID
Original name: MODIFIED BIEBL AND PFENNIG'S MEDIUM

Overview

External ontology
komodo.medium:1069 (source link unavailable) — MODIFIED BIEBL AND PFENNIG'S MEDIUM
Applications
  • Microbial cultivation
Synonyms
  • {'name': 'for_dsm_18064', 'source': 'KOMODO', 'source_id': 'komodo.medium:1069.1', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_18713_and_18859', 'source': 'KOMODO', 'source_id': 'komodo.medium:1069.2', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_18985', 'source': 'KOMODO', 'source_id': 'komodo.medium:1069.4', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_19947_and_19784', 'source': 'KOMODO', 'source_id': 'komodo.medium:1069.3', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_21808_and_21809', 'source': 'KOMODO', 'source_id': 'komodo.medium:1069.5', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_24766', 'source': 'KOMODO', 'source_id': 'komodo.medium:1069.6', 'original_category': 'bacterial'}
pH
7.0
Notes
Source: KOMODO ModelSEED | ID: 1069 | DSMZ Medium: 1069 (mediadive.medium:1069) | Aerobic: No

Composition

flowchart LR
    CultureMech_003657["modified_biebl_and_pfennigs_medium"]
    ing0_KH2PO4["KH2PO4"]
    CultureMech_003657 --> ing0_KH2PO4
    CHEBI_63036["CHEBI:63036"]
    ing0_KH2PO4 -.-> CHEBI_63036
    ing1_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
    CultureMech_003657 --> ing1_CaCl2_x_2_H2O
    CHEBI_86158["CHEBI:86158"]
    ing1_CaCl2_x_2_H2O -.-> CHEBI_86158
    ing2_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
    CultureMech_003657 --> ing2_MgSO4_x_7_H2O
    CHEBI_31795["CHEBI:31795"]
    ing2_MgSO4_x_7_H2O -.-> CHEBI_31795
    ing3_NH4Cl["NH4Cl"]
    CultureMech_003657 --> ing3_NH4Cl
    CHEBI_31206["CHEBI:31206"]
    ing3_NH4Cl -.-> CHEBI_31206
    ing4_NaCl["NaCl"]
    CultureMech_003657 --> ing4_NaCl
    CHEBI_26710["CHEBI:26710"]
    ing4_NaCl -.-> CHEBI_26710
    ing5_Yeast_extract["Yeast extract"]
    CultureMech_003657 --> ing5_Yeast_extract
    ing6_Ferric_citrate["Ferric citrate"]
    CultureMech_003657 --> ing6_Ferric_citrate
    CHEBI_144421["CHEBI:144421"]
    ing6_Ferric_citrate -.-> CHEBI_144421
    ing7_HCl["HCl"]
    CultureMech_003657 --> ing7_HCl
    CHEBI_17883["CHEBI:17883"]
    ing7_HCl -.-> CHEBI_17883
    ing8_ZnCl2["ZnCl2"]
    CultureMech_003657 --> ing8_ZnCl2
    CHEBI_49976["CHEBI:49976"]
    ing8_ZnCl2 -.-> CHEBI_49976
    ing9_MnCl2_x_4_H2O["MnCl2 x 4 H2O"]
    CultureMech_003657 --> ing9_MnCl2_x_4_H2O
    CHEBI_86368["CHEBI:86368"]
    ing9_MnCl2_x_4_H2O -.-> CHEBI_86368
    ing10_H3BO3["H3BO3"]
    CultureMech_003657 --> ing10_H3BO3
    CHEBI_33118["CHEBI:33118"]
    ing10_H3BO3 -.-> CHEBI_33118
    ing11_CoCl2_x_6_H2O["CoCl2 x 6 H2O"]
    CultureMech_003657 --> ing11_CoCl2_x_6_H2O
    CHEBI_53503["CHEBI:53503"]
    ing11_CoCl2_x_6_H2O -.-> CHEBI_53503
    ing12_CuCl2_x_2_H2O["CuCl2 x 2 H2O"]
    CultureMech_003657 --> ing12_CuCl2_x_2_H2O
    CHEBI_86318["CHEBI:86318"]
    ing12_CuCl2_x_2_H2O -.-> CHEBI_86318
    ing13_NiCl2_x_6_H2O["NiCl2 x 6 H2O"]
    CultureMech_003657 --> ing13_NiCl2_x_6_H2O
    CHEBI_34887["CHEBI:34887"]
    ing13_NiCl2_x_6_H2O -.-> CHEBI_34887
    ing14_Na2MoO4_x_2_H2O["Na2MoO4 x 2 H2O"]
    CultureMech_003657 --> ing14_Na2MoO4_x_2_H2O
    CHEBI_75213["CHEBI:75213"]
    ing14_Na2MoO4_x_2_H2O -.-> CHEBI_75213

Ingredients (15)

# Ingredient Concentration Ontology Notes
1 KH2PO4
H2O4P.K 136.084 g/mol
0.5 G_PER_L CHEBI:63036
potassium dihydrogen phosphate
2 CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
0.15 G_PER_L CHEBI:86158
calcium chloride dihydrate
3 MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
2 G_PER_L CHEBI:31795
magnesium sulfate heptahydrate
4 NH4Cl
Cl.H4N 53.492 g/mol
0.34 G_PER_L CHEBI:31206
ammonium chloride
5 NaCl
Cl.Na 58.443 g/mol
20 G_PER_L CHEBI:26710
sodium chloride
6 Yeast extract 0.4 G_PER_L
7 Ferric citrate
C6H5FeO7 244.944 g/mol
0.005 G_PER_L CHEBI:144421
iron(III) citrate
8 HCl
HCl 36.461 g/mol
0.25 G_PER_L CHEBI:17883
hydrogen chloride
9 ZnCl2
2Cl.Zn 136.296 g/mol
0.07 G_PER_L CHEBI:49976
zinc dichloride
10 MnCl2 x 4 H2O
Cl2Mn.4H2O 197.904 g/mol
0.1 G_PER_L CHEBI:86368
manganese(II) chloride tetrahydrate
11 H3BO3
H3BO3 61.833 g/mol
0.06 G_PER_L CHEBI:33118
boric acid
12 CoCl2 x 6 H2O
2Cl.Co.6H2O 237.929 g/mol
0.2 G_PER_L CHEBI:53503
cobalt chloride hexahydrate
13 CuCl2 x 2 H2O
Cl2Cu.2H2O 170.482 g/mol
0.02 G_PER_L CHEBI:86318
copper(II) chloride dihydrate
14 NiCl2 x 6 H2O
Cl2Ni 129.599 g/mol
0.02 G_PER_L CHEBI:34887
nickel dichloride
15 Na2MoO4 x 2 H2O
2H2O.MoO4.2Na 241.946 g/mol
0.04 G_PER_L CHEBI:75213
sodium molybdate dihydrate

Target organisms

No target organisms are recorded.

Provenance

Merged from 8 source records.

TimestampCuratorActionNotes
2026-01-27T01:15:01.fZ komodo-web-import Imported from KOMODO web table Source: KOMODO, ID: 1069
2026-02-03T11:19:02.623887 dsmz-resolver-v1.0 Enriched with DSMZ composition Copied ingredients from DSMZ Medium 1069
2026-03-13T06:19:21.415954Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:003657
2026-03-17T06:30:03.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:35.677195+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "MODIFIED BIEBL AND PFENNIG'S MEDIUM" to "modified_biebl_and_pfennigs_medium" for consistent matching
2026-06-05T07:40:18.687326+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 14 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:46:43.397795+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 3 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.
2026-08-06T03:04:39.099995+00:00 recipe-merger Merged 8 duplicate recipes into canonical record Sources: KOMODO_1069_MODIFIED_BIEBL_AND_PFENNIG_S_MEDIUM, for_dsm_18064, for_dsm_18713_and_18859, for_dsm_18985, for_dsm_19947_and_19784, for_dsm_21808_and_21809, for_dsm_24766, modified_biebl_and_pfennigs_medium
2026-08-06T03:04:39.100065+00:00 merge_recipes.py MERGED_RECIPES merged 8 source recipe(s) on fingerprint 2dbff5b41e4170fb1f45b46158b76e8b504bd6c107dbbc9cb69fcc5c22bbdb54