Overview
- External ontology
- komodo.medium:1083 (source link unavailable) — ACIDULIPROFUNDUM medium
- Applications
-
- Microbial cultivation
- pH
- 4.5
- Notes
- Source: KOMODO ModelSEED | ID: 1083 | DSMZ Medium: 1083 (mediadive.medium:1083) | Aerobic: Yes
Composition
flowchart LR
CultureMech_003735["aciduliprofundum_medium"]
ing0_NaCl["NaCl"]
CultureMech_003735 --> ing0_NaCl
CHEBI_26710["CHEBI:26710"]
ing0_NaCl -.-> CHEBI_26710
ing1_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
CultureMech_003735 --> ing1_MgSO4_x_7_H2O
CHEBI_31795["CHEBI:31795"]
ing1_MgSO4_x_7_H2O -.-> CHEBI_31795
ing2_MgCl2_x_6_H2O["MgCl2 x 6 H2O"]
CultureMech_003735 --> ing2_MgCl2_x_6_H2O
CHEBI_86345["CHEBI:86345"]
ing2_MgCl2_x_6_H2O -.-> CHEBI_86345
ing3_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
CultureMech_003735 --> ing3_CaCl2_x_2_H2O
CHEBI_86158["CHEBI:86158"]
ing3_CaCl2_x_2_H2O -.-> CHEBI_86158
ing4_KCl["KCl"]
CultureMech_003735 --> ing4_KCl
CHEBI_32588["CHEBI:32588"]
ing4_KCl -.-> CHEBI_32588
ing5_NaBr["NaBr"]
CultureMech_003735 --> ing5_NaBr
CHEBI_63004["CHEBI:63004"]
ing5_NaBr -.-> CHEBI_63004
ing6__NH4_2SO4["(NH4)2SO4"]
CultureMech_003735 --> ing6__NH4_2SO4
CHEBI_62946["CHEBI:62946"]
ing6__NH4_2SO4 -.-> CHEBI_62946
ing7_KH2PO4["KH2PO4"]
CultureMech_003735 --> ing7_KH2PO4
CHEBI_63036["CHEBI:63036"]
ing7_KH2PO4 -.-> CHEBI_63036
ing8_Sodium_resazurin["Sodium resazurin"]
CultureMech_003735 --> ing8_Sodium_resazurin
CHEBI_8806["CHEBI:8806"]
ing8_Sodium_resazurin -.-> CHEBI_8806
ing9_Na3_citrate["Na3-citrate"]
CultureMech_003735 --> ing9_Na3_citrate
CHEBI_53258["CHEBI:53258"]
ing9_Na3_citrate -.-> CHEBI_53258
ing10_Yeast_extract["Yeast extract"]
CultureMech_003735 --> ing10_Yeast_extract
ing11_Tryptone["Tryptone"]
CultureMech_003735 --> ing11_Tryptone
ing12_Sulfur["Sulfur"]
CultureMech_003735 --> ing12_Sulfur
CHEBI_26833["CHEBI:26833"]
ing12_Sulfur -.-> CHEBI_26833
ing13_Na2S_x_9_H2O["Na2S x 9 H2O"]
CultureMech_003735 --> ing13_Na2S_x_9_H2O
CHEBI_76209["CHEBI:76209"]
ing13_Na2S_x_9_H2O -.-> CHEBI_76209
ing14_MnSO4_x_H2O["MnSO4 x H2O"]
CultureMech_003735 --> ing14_MnSO4_x_H2O
CHEBI_86364["CHEBI:86364"]
ing14_MnSO4_x_H2O -.-> CHEBI_86364
ing15_FeSO4_x_7_H2O["FeSO4 x 7 H2O"]
CultureMech_003735 --> ing15_FeSO4_x_7_H2O
CHEBI_75836["CHEBI:75836"]
ing15_FeSO4_x_7_H2O -.-> CHEBI_75836
ing16_CoCl2_x_6_H2O["CoCl2 x 6 H2O"]
CultureMech_003735 --> ing16_CoCl2_x_6_H2O
CHEBI_53503["CHEBI:53503"]
ing16_CoCl2_x_6_H2O -.-> CHEBI_53503
ing17_ZnSO4_x_7_H2O["ZnSO4 x 7 H2O"]
CultureMech_003735 --> ing17_ZnSO4_x_7_H2O
CHEBI_32312["CHEBI:32312"]
ing17_ZnSO4_x_7_H2O -.-> CHEBI_32312
ing18_CuSO4_x_5_H2O["CuSO4 x 5 H2O"]
CultureMech_003735 --> ing18_CuSO4_x_5_H2O
CHEBI_31440["CHEBI:31440"]
ing18_CuSO4_x_5_H2O -.-> CHEBI_31440
ing19_AlK_SO4_2_x_12_H2O["AlK(SO4)2 x 12 H2O"]
CultureMech_003735 --> ing19_AlK_SO4_2_x_12_H2O
CHEBI_86465["CHEBI:86465"]
ing19_AlK_SO4_2_x_12_H2O -.-> CHEBI_86465
ing20_H3BO3["H3BO3"]
CultureMech_003735 --> ing20_H3BO3
CHEBI_33118["CHEBI:33118"]
ing20_H3BO3 -.-> CHEBI_33118
ing21_Na2MoO4_x_2_H2O["Na2MoO4 x 2 H2O"]
CultureMech_003735 --> ing21_Na2MoO4_x_2_H2O
CHEBI_75213["CHEBI:75213"]
ing21_Na2MoO4_x_2_H2O -.-> CHEBI_75213
ing22__NH4_2Ni_SO4_2_x_6_H2O["(NH4)2Ni(SO4)2 x 6 H2O"]
CultureMech_003735 --> ing22__NH4_2Ni_SO4_2_x_6_H2O
CHEBI_86149["CHEBI:86149"]
ing22__NH4_2Ni_SO4_2_x_6_H2O -.-> CHEBI_86149
ing23_Na2WO4_x_2_H2O["Na2WO4 x 2 H2O"]
CultureMech_003735 --> ing23_Na2WO4_x_2_H2O
CHEBI_63939["CHEBI:63939"]
ing23_Na2WO4_x_2_H2O -.-> CHEBI_63939
ing24_Na2SeO4["Na2SeO4"]
CultureMech_003735 --> ing24_Na2SeO4
CHEBI_77775["CHEBI:77775"]
ing24_Na2SeO4 -.-> CHEBI_77775
Ingredients (25)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
NaCl
Cl.Na 58.443 g/mol
|
39.97 G_PER_L |
CHEBI:26710
sodium chloride
|
[Merged 2 duplicates: 29.97, 10.0] |
| 2 |
MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
|
33.4965 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
[Merged 2 duplicates: 3.4965, 30.0] |
| 3 |
MgCl2 x 6 H2O
2Cl.6H2O.Mg 203.301 g/mol
|
2.74725 G_PER_L |
CHEBI:86345
magnesium dichloride hexahydrate
|
|
| 4 |
CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
|
1.37962 G_PER_L |
CHEBI:86158
calcium chloride dihydrate
|
[Merged 2 duplicates: 0.37962, 1.0] |
| 5 |
KCl
Cl.K 74.551 g/mol
|
0.32967 G_PER_L |
CHEBI:32588
potassium chloride
|
|
| 6 |
NaBr
Br.Na 102.894 g/mol
|
0.04995 G_PER_L |
CHEBI:63004
sodium bromide
|
|
| 7 |
(NH4)2SO4
2H4N.O4S 132.141 g/mol
|
0.0999001 G_PER_L |
CHEBI:62946
ammonium sulfate
|
|
| 8 |
KH2PO4
H2O4P.K 136.084 g/mol
|
0.27972 G_PER_L |
CHEBI:63036
potassium dihydrogen phosphate
|
|
| 9 |
Sodium resazurin
C12H7NO4 229.191 g/mol
|
0.0004995 G_PER_L |
CHEBI:8806
Resazurin
|
|
| 10 |
Na3-citrate
C6H5O7.3Na 258.069 g/mol
|
2.93706 G_PER_L |
CHEBI:53258
sodium citrate
|
|
| 11 | Yeast extract | 0.999001 G_PER_L | ||
| 12 | Tryptone | 0.999001 G_PER_L | ||
| 13 |
Sulfur
S 32.067 g/mol
|
9.99001 G_PER_L |
CHEBI:26833
sulfur atom
|
|
| 14 |
Na2S x 9 H2O
9H2O.2Na.S 240.182 g/mol
|
0.499501 G_PER_L |
CHEBI:76209
sodium sulfide nonahydrate
|
|
| 15 |
MnSO4 x H2O
H2O.Mn.O4S 169.016 g/mol
|
5 G_PER_L |
CHEBI:86364
manganese(II) sulfate monohydrate
|
|
| 16 |
FeSO4 x 7 H2O
Fe.7H2O.O4S 278.013 g/mol
|
1 G_PER_L |
CHEBI:75836
iron(2+) sulfate heptahydrate
|
|
| 17 |
CoCl2 x 6 H2O
2Cl.Co.6H2O 237.929 g/mol
|
1.8 G_PER_L |
CHEBI:53503
cobalt chloride hexahydrate
|
|
| 18 |
ZnSO4 x 7 H2O
7H2O.O4S.Zn 287.558 g/mol
|
1.8 G_PER_L |
CHEBI:32312
zinc sulfate heptahydrate
|
|
| 19 |
CuSO4 x 5 H2O
Cu.5H2O.O4S 249.684 g/mol
|
0.1 G_PER_L |
CHEBI:31440
copper(II) sulfate pentahydrate
|
|
| 20 |
AlK(SO4)2 x 12 H2O
Al.12H2O.K.2O4S 474.386 g/mol
|
0.18 G_PER_L |
CHEBI:86465
potassium aluminium sulfate dodecahydrate
|
|
| 21 |
H3BO3
H3BO3 61.833 g/mol
|
0.1 G_PER_L |
CHEBI:33118
boric acid
|
|
| 22 |
Na2MoO4 x 2 H2O
2H2O.MoO4.2Na 241.946 g/mol
|
0.1 G_PER_L |
CHEBI:75213
sodium molybdate dihydrate
|
|
| 23 |
(NH4)2Ni(SO4)2 x 6 H2O
6H2O.2H4N.Ni.2O4S 394.987 g/mol
|
2.8 G_PER_L |
CHEBI:86149
ammonium nickel sulfate hexahydrate
|
|
| 24 |
Na2WO4 x 2 H2O
2H2O.2Na.O4W 329.846 g/mol
|
0.1 G_PER_L |
CHEBI:63939
sodium tungstate dihydrate
|
|
| 25 |
Na2SeO4
2Na.O4Se 188.936 g/mol
|
0.1 G_PER_L |
CHEBI:77775
sodium selenate
|
Target organisms
No target organisms are recorded.
Provenance
Merged from 2 source records.
- KOMODO_1083_ACIDULIPROFUNDUM_medium (CultureMech:003735)
- aciduliprofundum_medium (CultureMech:000518)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:01.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 1083 |
| 2026-02-03T11:18:56.076801 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 1083 |
| 2026-03-13T03:08:42.256777Z | data-quality-cleanup-v1.0 | Data quality fixes | Merged 3 duplicate ingredient(s) |
| 2026-03-13T06:19:21.775126Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:003735 |
| 2026-03-17T06:29:44.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:36.055715+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "ACIDULIPROFUNDUM medium" to "aciduliprofundum_medium" for consistent matching |
| 2026-06-05T07:40:18.801392+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 21 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:37:34.162778+00:00 | primary-term-regrounding-v1.0 | Re-grounded wrong primary term id (OAK-verified) | 1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-06-10T07:46:43.426240+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 5 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-08-06T03:04:21.458195+00:00 | recipe-merger | Merged 2 duplicate recipes into canonical record | Sources: KOMODO_1083_ACIDULIPROFUNDUM_medium, aciduliprofundum_medium |
| 2026-08-06T03:04:21.458249+00:00 | merge_recipes.py | MERGED_RECIPES | merged 2 source recipe(s) on fingerprint 1bceb4553b5a1b4e76a2a9b98ca8dee78ce2614ee14d4b64e505120bfc0c62f5 |