Overview
- External ontology
- komodo.medium:1090 (source link unavailable) — PYROBACULUM CALIDIFONTIS medium
- Applications
-
- Microbial cultivation
- pH
- 7.0
- Notes
- pH buffer: NaOH | Source: KOMODO ModelSEED | ID: 1090 | DSMZ Medium: 1090 (mediadive.medium:1090) | Aerobic: No
Composition
flowchart LR
CultureMech_003741["pyrobaculum_calidifontis_medium"]
ing0_Tryptone["Tryptone"]
CultureMech_003741 --> ing0_Tryptone
ing1_Yeast_extract["Yeast extract"]
CultureMech_003741 --> ing1_Yeast_extract
ing2_Na2S2O3_x_5_H2O["Na2S2O3 x 5 H2O"]
CultureMech_003741 --> ing2_Na2S2O3_x_5_H2O
CHEBI_32150["CHEBI:32150"]
ing2_Na2S2O3_x_5_H2O -.-> CHEBI_32150
ing3_NaOH["NaOH"]
CultureMech_003741 --> ing3_NaOH
CHEBI_32145["CHEBI:32145"]
ing3_NaOH -.-> CHEBI_32145
Ingredients (4)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 | Tryptone | 10 G_PER_L | ||
| 2 | Yeast extract | 1 G_PER_L | ||
| 3 |
Na2S2O3 x 5 H2O
5H2O.2Na.O3S2 248.186 g/mol
|
3 G_PER_L |
CHEBI:32150
sodium thiosulfate pentahydrate
|
|
| 4 |
NaOH
HO.Na 39.997 g/mol
|
variable VARIABLE |
CHEBI:32145
sodium hydroxide
|
pH adjustment (extracted from notes) |
Target organisms
No target organisms are recorded.
Provenance
Merged from 1 source record.
- KOMODO_1090_PYROBACULUM_CALIDIFONTIS_medium (CultureMech:003741)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:01.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 1090 |
| 2026-02-03T11:19:02.190317 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 1090 |
| 2026-03-13T03:08:57.470339Z | data-quality-cleanup-v1.0 | Data quality fixes | Added pH buffer: NaOH |
| 2026-03-13T06:19:21.814978Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:003741 |
| 2026-03-14T00:00:00+00:00 | schema-defaulter-v1.0 | Applied schema defaults and normalizations | Added default concentration for ingredient: NaOH |
| 2026-03-17T06:30:02.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:36.101295+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "PYROBACULUM CALIDIFONTIS medium" to "pyrobaculum_calidifontis_medium" for consistent matching |
| 2026-05-16T09:02:59.994699+00:00 | migrate_legacy_fields.py | MIGRATED_LEGACY_FIELDS | curation_history.date->timestamp=1 |
| 2026-06-05T07:40:18.843149+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 2 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-08-06T03:04:21.467899+00:00 | merge_recipes.py | MERGED_RECIPES | merged 1 source recipe(s) on fingerprint 1debe1f97e5b9606bf3e255eec3c9f4c4f75754c9e9ae147d170ee9bdb93d5b2 |