Overview
- External ontology
- komodo.medium:1381 (source link unavailable) — ? S? HELIORESTIS medium
- Applications
-
- Microbial cultivation
- pH range
- {'min': 9.0, 'max': 9.5}
- Notes
- Source: KOMODO ModelSEED | ID: 1381 | DSMZ Medium: 1381 (mediadive.medium:1381) | Aerobic: Yes
Composition
flowchart LR
CultureMech_004111["s_heliorestis_medium"]
ing0_EDTA["EDTA"]
CultureMech_004111 --> ing0_EDTA
CHEBI_4735["CHEBI:4735"]
ing0_EDTA -.-> CHEBI_4735
ing1_KH2PO4["KH2PO4"]
CultureMech_004111 --> ing1_KH2PO4
CHEBI_63036["CHEBI:63036"]
ing1_KH2PO4 -.-> CHEBI_63036
ing2_NH4Cl["NH4Cl"]
CultureMech_004111 --> ing2_NH4Cl
CHEBI_31206["CHEBI:31206"]
ing2_NH4Cl -.-> CHEBI_31206
ing3_Bicine["Bicine"]
CultureMech_004111 --> ing3_Bicine
CHEBI_39065["CHEBI:39065"]
ing3_Bicine -.-> CHEBI_39065
ing4_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
CultureMech_004111 --> ing4_MgSO4_x_7_H2O
CHEBI_31795["CHEBI:31795"]
ing4_MgSO4_x_7_H2O -.-> CHEBI_31795
ing5_CaCl2["CaCl2"]
CultureMech_004111 --> ing5_CaCl2
CHEBI_3312["CHEBI:3312"]
ing5_CaCl2 -.-> CHEBI_3312
ing6_Na2CO3["Na2CO3"]
CultureMech_004111 --> ing6_Na2CO3
CHEBI_29377["CHEBI:29377"]
ing6_Na2CO3 -.-> CHEBI_29377
ing7_NaHCO3["NaHCO3"]
CultureMech_004111 --> ing7_NaHCO3
CHEBI_32139["CHEBI:32139"]
ing7_NaHCO3 -.-> CHEBI_32139
ing8_Na_acetate["Na-acetate"]
CultureMech_004111 --> ing8_Na_acetate
CHEBI_32954["CHEBI:32954"]
ing8_Na_acetate -.-> CHEBI_32954
ing9_Yeast_extract["Yeast extract"]
CultureMech_004111 --> ing9_Yeast_extract
ing10_Na2S_x_9_H2O["Na2S x 9 H2O"]
CultureMech_004111 --> ing10_Na2S_x_9_H2O
CHEBI_76209["CHEBI:76209"]
ing10_Na2S_x_9_H2O -.-> CHEBI_76209
ing11_Na_pyruvate["Na-pyruvate"]
CultureMech_004111 --> ing11_Na_pyruvate
CHEBI_50144["CHEBI:50144"]
ing11_Na_pyruvate -.-> CHEBI_50144
ing12_Vitamin_B12["Vitamin B12"]
CultureMech_004111 --> ing12_Vitamin_B12
CHEBI_176843["CHEBI:176843"]
ing12_Vitamin_B12 -.-> CHEBI_176843
ing13_CoCl2_x_6_H2O["CoCl2 x 6 H2O"]
CultureMech_004111 --> ing13_CoCl2_x_6_H2O
CHEBI_53503["CHEBI:53503"]
ing13_CoCl2_x_6_H2O -.-> CHEBI_53503
ing14_MnCl2_x_4_H2O["MnCl2 x 4 H2O"]
CultureMech_004111 --> ing14_MnCl2_x_4_H2O
CHEBI_86368["CHEBI:86368"]
ing14_MnCl2_x_4_H2O -.-> CHEBI_86368
ing15_FeCl2_x_4_H2O["FeCl2 x 4 H2O"]
CultureMech_004111 --> ing15_FeCl2_x_4_H2O
CHEBI_86249["CHEBI:86249"]
ing15_FeCl2_x_4_H2O -.-> CHEBI_86249
ing16_H3BO3["H3BO3"]
CultureMech_004111 --> ing16_H3BO3
CHEBI_33118["CHEBI:33118"]
ing16_H3BO3 -.-> CHEBI_33118
ing17_CuCl2_x_2_H2O["CuCl2 x 2 H2O"]
CultureMech_004111 --> ing17_CuCl2_x_2_H2O
CHEBI_86318["CHEBI:86318"]
ing17_CuCl2_x_2_H2O -.-> CHEBI_86318
ing18_Na2MoO4_x_2_H2O["Na2MoO4 x 2 H2O"]
CultureMech_004111 --> ing18_Na2MoO4_x_2_H2O
CHEBI_75213["CHEBI:75213"]
ing18_Na2MoO4_x_2_H2O -.-> CHEBI_75213
ing19_NiCl2_x_6_H2O["NiCl2 x 6 H2O"]
CultureMech_004111 --> ing19_NiCl2_x_6_H2O
CHEBI_34887["CHEBI:34887"]
ing19_NiCl2_x_6_H2O -.-> CHEBI_34887
ing20_ZnCl2["ZnCl2"]
CultureMech_004111 --> ing20_ZnCl2
CHEBI_49976["CHEBI:49976"]
ing20_ZnCl2 -.-> CHEBI_49976
ing21_VOSO4_x_2_H2O["VOSO4 x 2 H2O"]
CultureMech_004111 --> ing21_VOSO4_x_2_H2O
CHEBI_87009["CHEBI:87009"]
ing21_VOSO4_x_2_H2O -.-> CHEBI_87009
ing22_Na2WO4_x_2_H2O["Na2WO4 x 2 H2O"]
CultureMech_004111 --> ing22_Na2WO4_x_2_H2O
CHEBI_63939["CHEBI:63939"]
ing22_Na2WO4_x_2_H2O -.-> CHEBI_63939
ing23_NaHSeO3["NaHSeO3"]
CultureMech_004111 --> ing23_NaHSeO3
Ingredients (24)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
EDTA
C10H16N2O8 292.244 g/mol
|
5.21 G_PER_L |
CHEBI:4735
ethylenediaminetetraacetic acid
|
[Merged 2 duplicates: 0.01, 5.2] |
| 2 |
KH2PO4
H2O4P.K 136.084 g/mol
|
0.5 G_PER_L |
CHEBI:63036
potassium dihydrogen phosphate
|
|
| 3 |
NH4Cl
Cl.H4N 53.492 g/mol
|
0.5 G_PER_L |
CHEBI:31206
ammonium chloride
|
|
| 4 | Bicine | 1.63 G_PER_L |
CHEBI:39065
bicine
|
|
| 5 |
MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
|
0.2 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
|
| 6 |
CaCl2
Ca.2Cl 110.984 g/mol
|
0.075 G_PER_L |
CHEBI:3312
calcium dichloride
|
|
| 7 |
Na2CO3
CO3.2Na 105.988 g/mol
|
2.5 G_PER_L |
CHEBI:29377
sodium carbonate
|
|
| 8 |
NaHCO3
CHO3.Na 84.006 g/mol
|
2.5 G_PER_L |
CHEBI:32139
sodium hydrogencarbonate
|
|
| 9 |
Na-acetate
C2H3O2.Na 82.034 g/mol
|
1 G_PER_L |
CHEBI:32954
sodium acetate
|
|
| 10 | Yeast extract | 0.1 G_PER_L | ||
| 11 |
Na2S x 9 H2O
9H2O.2Na.S 240.182 g/mol
|
0.5 G_PER_L |
CHEBI:76209
sodium sulfide nonahydrate
|
|
| 12 |
Na-pyruvate
C3H3O3.Na 110.044 g/mol
|
1 G_PER_L |
CHEBI:50144
sodium pyruvate
|
|
| 13 | Vitamin B12 | 2e-05 G_PER_L |
CHEBI:176843
vitamin B12
|
|
| 14 |
CoCl2 x 6 H2O
2Cl.Co.6H2O 237.929 g/mol
|
0.19 G_PER_L |
CHEBI:53503
cobalt chloride hexahydrate
|
|
| 15 |
MnCl2 x 4 H2O
Cl2Mn.4H2O 197.904 g/mol
|
0.1 G_PER_L |
CHEBI:86368
manganese(II) chloride tetrahydrate
|
|
| 16 |
FeCl2 x 4 H2O
Cl2Fe.4H2O 198.811 g/mol
|
1.5 G_PER_L |
CHEBI:86249
iron dichloride tetrahydrate
|
|
| 17 |
H3BO3
H3BO3 61.833 g/mol
|
0.006 G_PER_L |
CHEBI:33118
boric acid
|
|
| 18 |
CuCl2 x 2 H2O
Cl2Cu.2H2O 170.482 g/mol
|
0.017 G_PER_L |
CHEBI:86318
copper(II) chloride dihydrate
|
|
| 19 |
Na2MoO4 x 2 H2O
2H2O.MoO4.2Na 241.946 g/mol
|
0.188 G_PER_L |
CHEBI:75213
sodium molybdate dihydrate
|
|
| 20 |
NiCl2 x 6 H2O
Cl2Ni 129.599 g/mol
|
0.025 G_PER_L |
CHEBI:34887
nickel dichloride
|
|
| 21 |
ZnCl2
2Cl.Zn 136.296 g/mol
|
0.07 G_PER_L |
CHEBI:49976
zinc dichloride
|
|
| 22 |
VOSO4 x 2 H2O
2H2O.O4S.OV 199.036 g/mol
|
0.03 G_PER_L |
CHEBI:87009
vanadyl sulfate dihydrate
|
|
| 23 |
Na2WO4 x 2 H2O
2H2O.2Na.O4W 329.846 g/mol
|
0.002 G_PER_L |
CHEBI:63939
sodium tungstate dihydrate
|
|
| 24 | NaHSeO3 | 0.002 G_PER_L |
Target organisms
No target organisms are recorded.
Provenance
Merged from 2 source records.
- KOMODO_1381_S_HELIORESTIS_medium (CultureMech:004111)
- s_heliorestis_medium (CultureMech:000841)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:02.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 1381 |
| 2026-02-03T11:19:17.662884 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 1381 |
| 2026-03-13T03:09:38.801610Z | data-quality-cleanup-v1.0 | Data quality fixes | Merged 1 duplicate ingredient(s) |
| 2026-03-13T06:19:24.936323Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:004111 |
| 2026-03-17T06:30:50.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:39.766789+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "? S? HELIORESTIS medium" to "s_heliorestis_medium" for consistent matching |
| 2026-05-20T06:00:50.276980+00:00 | migrate_ph_range.py | MIGRATED_PH_RANGE | ph_range '9-9.5' -> {'min': 9.0, 'max': 9.5} |
| 2026-06-05T07:40:21.072929+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 22 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:46:44.187149+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 6 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-08-06T03:04:43.502143+00:00 | recipe-merger | Merged 2 duplicate recipes into canonical record | Sources: KOMODO_1381_S_HELIORESTIS_medium, s_heliorestis_medium |
| 2026-08-06T03:04:43.502194+00:00 | merge_recipes.py | MERGED_RECIPES | merged 2 source recipe(s) on fingerprint 742f0738a0bc94caf313594fb744b6854c6929c3758e65ab60240f08664edb83 |