desulfonauticus_medium

CultureMech:005159 bacterial DEFINED LIQUID
Original name: DESULFONAUTICUS medium

Overview

External ontology
komodo.medium:383d (source link unavailable) — DESULFONAUTICUS medium
Applications
  • Microbial cultivation
Synonyms
  • {'name': 'desulfobacterium_medium', 'source': 'KOMODO', 'source_id': 'komodo.medium:383', 'original_category': 'bacterial'}
  • {'name': 'desulfobacula_toluolica_medium', 'source': 'KOMODO', 'source_id': 'komodo.medium:383b', 'original_category': 'bacterial'}
  • {'name': 'desulfovibrio_sax_medium', 'source': 'KOMODO', 'source_id': 'komodo.medium:383a', 'original_category': 'bacterial'}
  • {'name': 'desulfovibrio_zosterae_medium', 'source': 'KOMODO', 'source_id': 'komodo.medium:383c', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_12861_and_dsm_12883', 'source': 'KOMODO', 'source_id': 'komodo.medium:383.7', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_12888', 'source': 'KOMODO', 'source_id': 'komodo.medium:383.8', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_14367_dsm_15579_dsm_15816_dsm_19338_dsm_22027', 'source': 'KOMODO', 'source_id': 'komodo.medium:383.9', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_14454', 'source': 'KOMODO', 'source_id': 'komodo.medium:383.19', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_14728', 'source': 'KOMODO', 'source_id': 'komodo.medium:383.11', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_14982', 'source': 'KOMODO', 'source_id': 'komodo.medium:383.12', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_15286_and_dsm_21156', 'source': 'KOMODO', 'source_id': 'komodo.medium:383.13', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_16109_and_dsm_17464', 'source': 'KOMODO', 'source_id': 'komodo.medium:383.14', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_17291', 'source': 'KOMODO', 'source_id': 'komodo.medium:383.15', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_17477', 'source': 'KOMODO', 'source_id': 'komodo.medium:383.16', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_18378_and_dsm_18379', 'source': 'KOMODO', 'source_id': 'komodo.medium:383.17', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_18732', 'source': 'KOMODO', 'source_id': 'komodo.medium:383a.1', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_3379_dsm_3380_dsm_3381', 'source': 'KOMODO', 'source_id': 'komodo.medium:383.18', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_3382', 'source': 'KOMODO', 'source_id': 'komodo.medium:383.1', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_3383', 'source': 'KOMODO', 'source_id': 'komodo.medium:383.2', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_3384', 'source': 'KOMODO', 'source_id': 'komodo.medium:383.3', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_3385', 'source': 'KOMODO', 'source_id': 'komodo.medium:383.4', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_8541', 'source': 'KOMODO', 'source_id': 'komodo.medium:383.5', 'original_category': 'bacterial'}
  • {'name': 'for_dsm_9120_dsm_17456_and_dsm_19275', 'source': 'KOMODO', 'source_id': 'komodo.medium:383.6', 'original_category': 'bacterial'}
  • {'name': 'medium_383_modified_for_dsm_10085', 'source': 'KOMODO', 'source_id': 'komodo.medium:383_10085', 'original_category': 'bacterial'}
  • {'name': 'medium_383_modified_for_dsm_10141', 'source': 'KOMODO', 'source_id': 'komodo.medium:383_10141', 'original_category': 'bacterial'}
  • {'name': 'medium_383_modified_for_dsm_10259', 'source': 'KOMODO', 'source_id': 'komodo.medium:383_10259', 'original_category': 'bacterial'}
  • {'name': 'medium_383_modified_for_dsm_11384', 'source': 'KOMODO', 'source_id': 'komodo.medium:383_11384', 'original_category': 'bacterial'}
  • {'name': 'medium_383_modified_for_dsm_8540', 'source': 'KOMODO', 'source_id': 'komodo.medium:383_8540', 'original_category': 'bacterial'}
  • {'name': 'medium_383_modified_for_dsm_9755', 'source': 'KOMODO', 'source_id': 'komodo.medium:383_9755', 'original_category': 'bacterial'}
Notes
Source: KOMODO ModelSEED | ID: 383d | DSMZ Medium: 383d (mediadive.medium:383d) | Aerobic: No

Composition

flowchart LR
    CultureMech_005159["desulfonauticus_medium"]
    ing0_Na2SO4["Na2SO4"]
    CultureMech_005159 --> ing0_Na2SO4
    CHEBI_32149["CHEBI:32149"]
    ing0_Na2SO4 -.-> CHEBI_32149
    ing1_KH2PO4["KH2PO4"]
    CultureMech_005159 --> ing1_KH2PO4
    CHEBI_63036["CHEBI:63036"]
    ing1_KH2PO4 -.-> CHEBI_63036
    ing2_NH4Cl["NH4Cl"]
    CultureMech_005159 --> ing2_NH4Cl
    CHEBI_31206["CHEBI:31206"]
    ing2_NH4Cl -.-> CHEBI_31206
    ing3_NaCl["NaCl"]
    CultureMech_005159 --> ing3_NaCl
    CHEBI_26710["CHEBI:26710"]
    ing3_NaCl -.-> CHEBI_26710
    ing4_MgCl2_x_6_H2O["MgCl2 x 6 H2O"]
    CultureMech_005159 --> ing4_MgCl2_x_6_H2O
    CHEBI_86345["CHEBI:86345"]
    ing4_MgCl2_x_6_H2O -.-> CHEBI_86345
    ing5_KCl["KCl"]
    CultureMech_005159 --> ing5_KCl
    CHEBI_32588["CHEBI:32588"]
    ing5_KCl -.-> CHEBI_32588
    ing6_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
    CultureMech_005159 --> ing6_CaCl2_x_2_H2O
    CHEBI_86158["CHEBI:86158"]
    ing6_CaCl2_x_2_H2O -.-> CHEBI_86158
    ing7_Sodium_resazurin["Sodium resazurin"]
    CultureMech_005159 --> ing7_Sodium_resazurin
    CHEBI_8806["CHEBI:8806"]
    ing7_Sodium_resazurin -.-> CHEBI_8806
    ing8_Na2CO3["Na2CO3"]
    CultureMech_005159 --> ing8_Na2CO3
    CHEBI_29377["CHEBI:29377"]
    ing8_Na2CO3 -.-> CHEBI_29377
    ing9_Na2S_x_9_H2O["Na2S x 9 H2O"]
    CultureMech_005159 --> ing9_Na2S_x_9_H2O
    CHEBI_76209["CHEBI:76209"]
    ing9_Na2S_x_9_H2O -.-> CHEBI_76209
    ing10_NaOH["NaOH"]
    CultureMech_005159 --> ing10_NaOH
    CHEBI_32145["CHEBI:32145"]
    ing10_NaOH -.-> CHEBI_32145
    ing11_Na2SeO3_x_5_H2O["Na2SeO3 x 5 H2O"]
    CultureMech_005159 --> ing11_Na2SeO3_x_5_H2O
    CHEBI_131361["CHEBI:131361"]
    ing11_Na2SeO3_x_5_H2O -.-> CHEBI_131361
    ing12_Na2WO4_x_2_H2O["Na2WO4 x 2 H2O"]
    CultureMech_005159 --> ing12_Na2WO4_x_2_H2O
    CHEBI_63939["CHEBI:63939"]
    ing12_Na2WO4_x_2_H2O -.-> CHEBI_63939
    ing13_HCl["HCl"]
    CultureMech_005159 --> ing13_HCl
    CHEBI_17883["CHEBI:17883"]
    ing13_HCl -.-> CHEBI_17883
    ing14_FeCl2_x_4_H2O["FeCl2 x 4 H2O"]
    CultureMech_005159 --> ing14_FeCl2_x_4_H2O
    CHEBI_86249["CHEBI:86249"]
    ing14_FeCl2_x_4_H2O -.-> CHEBI_86249
    ing15_ZnCl2["ZnCl2"]
    CultureMech_005159 --> ing15_ZnCl2
    CHEBI_49976["CHEBI:49976"]
    ing15_ZnCl2 -.-> CHEBI_49976
    ing16_MnCl2_x_4_H2O["MnCl2 x 4 H2O"]
    CultureMech_005159 --> ing16_MnCl2_x_4_H2O
    CHEBI_86368["CHEBI:86368"]
    ing16_MnCl2_x_4_H2O -.-> CHEBI_86368
    ing17_H3BO3["H3BO3"]
    CultureMech_005159 --> ing17_H3BO3
    CHEBI_33118["CHEBI:33118"]
    ing17_H3BO3 -.-> CHEBI_33118
    ing18_CoCl2_x_6_H2O["CoCl2 x 6 H2O"]
    CultureMech_005159 --> ing18_CoCl2_x_6_H2O
    CHEBI_53503["CHEBI:53503"]
    ing18_CoCl2_x_6_H2O -.-> CHEBI_53503
    ing19_CuCl2_x_2_H2O["CuCl2 x 2 H2O"]
    CultureMech_005159 --> ing19_CuCl2_x_2_H2O
    CHEBI_86318["CHEBI:86318"]
    ing19_CuCl2_x_2_H2O -.-> CHEBI_86318
    ing20_NiCl2_x_6_H2O["NiCl2 x 6 H2O"]
    CultureMech_005159 --> ing20_NiCl2_x_6_H2O
    CHEBI_34887["CHEBI:34887"]
    ing20_NiCl2_x_6_H2O -.-> CHEBI_34887
    ing21_Na2MoO4_x_2_H2O["Na2MoO4 x 2 H2O"]
    CultureMech_005159 --> ing21_Na2MoO4_x_2_H2O
    CHEBI_75213["CHEBI:75213"]
    ing21_Na2MoO4_x_2_H2O -.-> CHEBI_75213
    ing22_Biotin["Biotin"]
    CultureMech_005159 --> ing22_Biotin
    CHEBI_15956["CHEBI:15956"]
    ing22_Biotin -.-> CHEBI_15956
    ing23_Folic_acid["Folic acid"]
    CultureMech_005159 --> ing23_Folic_acid
    CHEBI_27470["CHEBI:27470"]
    ing23_Folic_acid -.-> CHEBI_27470
    ing24_Pyridoxine_hydrochloride["Pyridoxine hydrochloride"]
    CultureMech_005159 --> ing24_Pyridoxine_hydrochloride
    CHEBI_30961["CHEBI:30961"]
    ing24_Pyridoxine_hydrochloride -.-> CHEBI_30961
    ing25_Thiamine_HCl["Thiamine HCl"]
    CultureMech_005159 --> ing25_Thiamine_HCl
    CHEBI_49105["CHEBI:49105"]
    ing25_Thiamine_HCl -.-> CHEBI_49105
    ing26_Riboflavin["Riboflavin"]
    CultureMech_005159 --> ing26_Riboflavin
    CHEBI_17015["CHEBI:17015"]
    ing26_Riboflavin -.-> CHEBI_17015
    ing27_Nicotinic_acid["Nicotinic acid"]
    CultureMech_005159 --> ing27_Nicotinic_acid
    CHEBI_15940["CHEBI:15940"]
    ing27_Nicotinic_acid -.-> CHEBI_15940
    ing28_Calcium_D_____pantothenate["Calcium D-(+)-pantothenate"]
    CultureMech_005159 --> ing28_Calcium_D_____pantothenate
    CHEBI_31345["CHEBI:31345"]
    ing28_Calcium_D_____pantothenate -.-> CHEBI_31345
    ing29_Vitamin_B12["Vitamin B12"]
    CultureMech_005159 --> ing29_Vitamin_B12
    CHEBI_176843["CHEBI:176843"]
    ing29_Vitamin_B12 -.-> CHEBI_176843
    CultureMech_005159 --> more["...2 more"]

Ingredients (32)

# Ingredient Concentration Ontology Notes
1 Na2SO4
2Na.O4S 142.043 g/mol
3.08642 G_PER_L CHEBI:32149
sodium sulfate
2 KH2PO4
H2O4P.K 136.084 g/mol
0.205761 G_PER_L CHEBI:63036
potassium dihydrogen phosphate
3 NH4Cl
Cl.H4N 53.492 g/mol
0.308642 G_PER_L CHEBI:31206
ammonium chloride
4 NaCl
Cl.Na 58.443 g/mol
21.6049 G_PER_L CHEBI:26710
sodium chloride
5 MgCl2 x 6 H2O
2Cl.6H2O.Mg 203.301 g/mol
3.08642 G_PER_L CHEBI:86345
magnesium dichloride hexahydrate
6 KCl
Cl.K 74.551 g/mol
0.514403 G_PER_L CHEBI:32588
potassium chloride
7 CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
0.154321 G_PER_L CHEBI:86158
calcium chloride dihydrate
8 Sodium resazurin
C12H7NO4 229.191 g/mol
0.000514403 G_PER_L CHEBI:8806
Resazurin
9 Na2CO3
CO3.2Na 105.988 g/mol
50 G_PER_L CHEBI:29377
sodium carbonate
10 Na2S x 9 H2O
9H2O.2Na.S 240.182 g/mol
30.7692 G_PER_L CHEBI:76209
sodium sulfide nonahydrate
11 NaOH
HO.Na 39.997 g/mol
0.5 G_PER_L CHEBI:32145
sodium hydroxide
12 Na2SeO3 x 5 H2O
5H2O.2Na.O3Se 263.012 g/mol
0.003 G_PER_L CHEBI:131361
disodium selenite pentahydrate
13 Na2WO4 x 2 H2O
2H2O.2Na.O4W 329.846 g/mol
0.004 G_PER_L CHEBI:63939
sodium tungstate dihydrate
14 HCl
HCl 36.461 g/mol
2.5 G_PER_L CHEBI:17883
hydrogen chloride
15 FeCl2 x 4 H2O
Cl2Fe.4H2O 198.811 g/mol
1.5 G_PER_L CHEBI:86249
iron dichloride tetrahydrate
16 ZnCl2
2Cl.Zn 136.296 g/mol
0.07 G_PER_L CHEBI:49976
zinc dichloride
17 MnCl2 x 4 H2O
Cl2Mn.4H2O 197.904 g/mol
0.1 G_PER_L CHEBI:86368
manganese(II) chloride tetrahydrate
18 H3BO3
H3BO3 61.833 g/mol
0.006 G_PER_L CHEBI:33118
boric acid
19 CoCl2 x 6 H2O
2Cl.Co.6H2O 237.929 g/mol
0.19 G_PER_L CHEBI:53503
cobalt chloride hexahydrate
20 CuCl2 x 2 H2O
Cl2Cu.2H2O 170.482 g/mol
0.002 G_PER_L CHEBI:86318
copper(II) chloride dihydrate
21 NiCl2 x 6 H2O
Cl2Ni 129.599 g/mol
0.024 G_PER_L CHEBI:34887
nickel dichloride
22 Na2MoO4 x 2 H2O
2H2O.MoO4.2Na 241.946 g/mol
0.036 G_PER_L CHEBI:75213
sodium molybdate dihydrate
23 Biotin
C10H16N2O3S 244.316 g/mol
0.02 G_PER_L CHEBI:15956
biotin
24 Folic acid
C19H19N7O6 441.404 g/mol
0.02 G_PER_L CHEBI:27470
folic acid
25 Pyridoxine hydrochloride
C8H11NO3.HCl 205.641 g/mol
0.1 G_PER_L CHEBI:30961
pyridoxine hydrochloride
26 Thiamine HCl
C12H17N4OS.Cl.HCl 337.276 g/mol
0.05 G_PER_L CHEBI:49105
thiamine hydrochloride
27 Riboflavin
C17H20N4O6 376.369 g/mol
0.05 G_PER_L CHEBI:17015
riboflavin
28 Nicotinic acid
C6H5NO2 123.111 g/mol
0.05 G_PER_L CHEBI:15940
nicotinic acid
29 Calcium D-(+)-pantothenate
2C9H16NO5.Ca 476.536 g/mol
0.05 G_PER_L CHEBI:31345
Calcium pantothenate
30 Vitamin B12 0.001 G_PER_L CHEBI:176843
vitamin B12
31 p-Aminobenzoic acid
C7H7NO2 137.138 g/mol
0.05 G_PER_L CHEBI:30753
4-aminobenzoic acid
32 (DL)-alpha-Lipoic acid
C8H14O2S2 206.332 g/mol
0.05 G_PER_L CHEBI:16494
lipoic acid

Target organisms

No target organisms are recorded.

Provenance

Merged from 31 source records.

TimestampCuratorActionNotes
2026-01-27T01:15:02.fZ komodo-web-import Imported from KOMODO web table Source: KOMODO, ID: 383d
2026-02-03T11:19:01.966423 dsmz-resolver-v1.0 Enriched with DSMZ composition Copied ingredients from DSMZ Medium 383
2026-02-06T05:10:24.320323Z invalid-chebi-removal Removed 1 invalid CHEBI ID(s) Removed CHEBI IDs with invalid format (7+ digits) from MicrobeMediaParam source data
2026-03-13T06:19:30.689722Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:005159
2026-03-17T06:30:01.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:46.476203+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "DESULFONAUTICUS medium" to "desulfonauticus_medium" for consistent matching
2026-06-05T07:40:22.903827+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 30 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:46:44.743233+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 5 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.
2026-08-06T03:04:48.438453+00:00 recipe-merger Merged 31 duplicate recipes into canonical record Sources: KOMODO_383_DESULFOBACTERIUM_MEDIUM, KOMODO_383d_DESULFONAUTICUS_medium, desulfobacula_toluolica_medium, desulfonauticus_medium, desulfovibrio_sax_medium, desulfovibrio_zosterae_medium, for_dsm_12861_and_dsm_12883, for_dsm_12888, for_dsm_14367_dsm_15579_dsm_15816_dsm_19338_dsm_22027, for_dsm_14454, for_dsm_14728, for_dsm_14982, for_dsm_15286_and_dsm_21156, for_dsm_16109_and_dsm_17464, for_dsm_17291, for_dsm_17477, for_dsm_18378_and_dsm_18379, for_dsm_18732, for_dsm_3379_dsm_3380_dsm_3381, for_dsm_3382, for_dsm_3383, for_dsm_3384, for_dsm_3385, for_dsm_8541, for_dsm_9120_dsm_17456_and_dsm_19275, medium_383_modified_for_dsm_10085, medium_383_modified_for_dsm_10141, medium_383_modified_for_dsm_10259, medium_383_modified_for_dsm_11384, medium_383_modified_for_dsm_8540, medium_383_modified_for_dsm_9755
2026-08-06T03:04:48.438788+00:00 merge_recipes.py MERGED_RECIPES merged 31 source recipe(s) on fingerprint 6000f22a3d04e1d3e0ee75ae3d19d08c313afc84bc0f66067dfaddeb6b411542