alicyclobacillus_medium

CultureMech:005217 bacterial COMPLEX SOLID_AGAR
Original name: ALICYCLOBACILLUS medium

Overview

External ontology
komodo.medium:402 (source link unavailable) — ALICYCLOBACILLUS medium
Applications
  • Microbial cultivation
Synonyms
  • {'name': 'for_strains_of_a_cycloheptanicus', 'source': 'KOMODO', 'source_id': 'komodo.medium:402.1', 'original_category': 'bacterial'}
  • {'name': 'medium_402_modified_for_dsm_11983', 'source': 'KOMODO', 'source_id': 'komodo.medium:402_11983', 'original_category': 'bacterial'}
  • {'name': 'medium_402_modified_for_dsm_14558', 'source': 'KOMODO', 'source_id': 'komodo.medium:402_14558', 'original_category': 'bacterial'}
  • {'name': 'medium_402_modified_for_dsm_14745', 'source': 'KOMODO', 'source_id': 'komodo.medium:402_14745', 'original_category': 'bacterial'}
  • {'name': 'medium_402_modified_for_dsm_14955', 'source': 'KOMODO', 'source_id': 'komodo.medium:402_14955', 'original_category': 'bacterial'}
  • {'name': 'medium_402_modified_for_dsm_16176', 'source': 'KOMODO', 'source_id': 'komodo.medium:402_16176', 'original_category': 'bacterial'}
  • {'name': 'medium_402_modified_for_dsm_17614', 'source': 'KOMODO', 'source_id': 'komodo.medium:402_17614', 'original_category': 'bacterial'}
  • {'name': 'medium_402_modified_for_dsm_18237', 'source': 'KOMODO', 'source_id': 'komodo.medium:402_18237', 'original_category': 'bacterial'}
  • {'name': 'medium_402_modified_for_dsm_2498', 'source': 'KOMODO', 'source_id': 'komodo.medium:402_2498', 'original_category': 'bacterial'}
  • {'name': 'medium_402_modified_for_dsm_3922', 'source': 'KOMODO', 'source_id': 'komodo.medium:402_3922', 'original_category': 'bacterial'}
  • {'name': 'medium_402_modified_for_dsm_3923', 'source': 'KOMODO', 'source_id': 'komodo.medium:402_3923', 'original_category': 'bacterial'}
  • {'name': 'medium_402_modified_for_dsm_3924', 'source': 'KOMODO', 'source_id': 'komodo.medium:402_3924', 'original_category': 'bacterial'}
  • {'name': 'medium_402_modified_for_dsm_446', 'source': 'KOMODO', 'source_id': 'komodo.medium:402_446', 'original_category': 'bacterial'}
  • {'name': 'medium_402_modified_for_dsm_448', 'source': 'KOMODO', 'source_id': 'komodo.medium:402_448', 'original_category': 'bacterial'}
  • {'name': 'medium_402_modified_for_dsm_449', 'source': 'KOMODO', 'source_id': 'komodo.medium:402_449', 'original_category': 'bacterial'}
  • {'name': 'medium_402_modified_for_dsm_451', 'source': 'KOMODO', 'source_id': 'komodo.medium:402_451', 'original_category': 'bacterial'}
  • {'name': 'medium_402_modified_for_dsm_452', 'source': 'KOMODO', 'source_id': 'komodo.medium:402_452', 'original_category': 'bacterial'}
  • {'name': 'medium_402_modified_for_dsm_453', 'source': 'KOMODO', 'source_id': 'komodo.medium:402_453', 'original_category': 'bacterial'}
  • {'name': 'medium_402_modified_for_dsm_454', 'source': 'KOMODO', 'source_id': 'komodo.medium:402_454', 'original_category': 'bacterial'}
  • {'name': 'medium_402_modified_for_dsm_455', 'source': 'KOMODO', 'source_id': 'komodo.medium:402_455', 'original_category': 'bacterial'}
pH
4.0
Notes
Source: KOMODO ModelSEED | ID: 402 | DSMZ Medium: 402 (mediadive.medium:402) | Aerobic: No

Composition

flowchart LR
    CultureMech_005217["alicyclobacillus_medium"]
    ing0_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
    CultureMech_005217 --> ing0_CaCl2_x_2_H2O
    CHEBI_86158["CHEBI:86158"]
    ing0_CaCl2_x_2_H2O -.-> CHEBI_86158
    ing1_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
    CultureMech_005217 --> ing1_MgSO4_x_7_H2O
    CHEBI_31795["CHEBI:31795"]
    ing1_MgSO4_x_7_H2O -.-> CHEBI_31795
    ing2__NH4_2SO4["(NH4)2SO4"]
    CultureMech_005217 --> ing2__NH4_2SO4
    CHEBI_62946["CHEBI:62946"]
    ing2__NH4_2SO4 -.-> CHEBI_62946
    ing3_Yeast_extract["Yeast extract"]
    CultureMech_005217 --> ing3_Yeast_extract
    ing4_Glucose["Glucose"]
    CultureMech_005217 --> ing4_Glucose
    CHEBI_17234["CHEBI:17234"]
    ing4_Glucose -.-> CHEBI_17234
    ing5_KH2PO4["KH2PO4"]
    CultureMech_005217 --> ing5_KH2PO4
    CHEBI_63036["CHEBI:63036"]
    ing5_KH2PO4 -.-> CHEBI_63036
    ing6_Agar["Agar"]
    CultureMech_005217 --> ing6_Agar
    CHEBI_2509["CHEBI:2509"]
    ing6_Agar -.-> CHEBI_2509
    ing7_ZnSO4_x_7_H2O["ZnSO4 x 7 H2O"]
    CultureMech_005217 --> ing7_ZnSO4_x_7_H2O
    CHEBI_32312["CHEBI:32312"]
    ing7_ZnSO4_x_7_H2O -.-> CHEBI_32312
    ing8_MnCl2_x_4_H2O["MnCl2 x 4 H2O"]
    CultureMech_005217 --> ing8_MnCl2_x_4_H2O
    CHEBI_86368["CHEBI:86368"]
    ing8_MnCl2_x_4_H2O -.-> CHEBI_86368
    ing9_H3BO3["H3BO3"]
    CultureMech_005217 --> ing9_H3BO3
    CHEBI_33118["CHEBI:33118"]
    ing9_H3BO3 -.-> CHEBI_33118
    ing10_CoCl2_x_6_H2O["CoCl2 x 6 H2O"]
    CultureMech_005217 --> ing10_CoCl2_x_6_H2O
    CHEBI_53503["CHEBI:53503"]
    ing10_CoCl2_x_6_H2O -.-> CHEBI_53503
    ing11_CuCl2_x_2_H2O["CuCl2 x 2 H2O"]
    CultureMech_005217 --> ing11_CuCl2_x_2_H2O
    CHEBI_86318["CHEBI:86318"]
    ing11_CuCl2_x_2_H2O -.-> CHEBI_86318
    ing12_NiCl2_x_6_H2O["NiCl2 x 6 H2O"]
    CultureMech_005217 --> ing12_NiCl2_x_6_H2O
    CHEBI_34887["CHEBI:34887"]
    ing12_NiCl2_x_6_H2O -.-> CHEBI_34887
    ing13_Na2MoO4_x_2_H2O["Na2MoO4 x 2 H2O"]
    CultureMech_005217 --> ing13_Na2MoO4_x_2_H2O
    CHEBI_75213["CHEBI:75213"]
    ing13_Na2MoO4_x_2_H2O -.-> CHEBI_75213

Ingredients (14)

# Ingredient Concentration Ontology Notes
1 CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
0.25 G_PER_L CHEBI:86158
calcium chloride dihydrate
2 MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
0.5 G_PER_L CHEBI:31795
magnesium sulfate heptahydrate
3 (NH4)2SO4
2H4N.O4S 132.141 g/mol
0.2 G_PER_L CHEBI:62946
ammonium sulfate
4 Yeast extract 2 G_PER_L
5 Glucose
C6H12O6 180.156 g/mol
5 G_PER_L CHEBI:17234
glucose
6 KH2PO4
H2O4P.K 136.084 g/mol
3 G_PER_L CHEBI:63036
potassium dihydrogen phosphate
7 Agar 30 G_PER_L CHEBI:2509
agar
8 ZnSO4 x 7 H2O
7H2O.O4S.Zn 287.558 g/mol
0.1 G_PER_L CHEBI:32312
zinc sulfate heptahydrate
9 MnCl2 x 4 H2O
Cl2Mn.4H2O 197.904 g/mol
0.03 G_PER_L CHEBI:86368
manganese(II) chloride tetrahydrate
10 H3BO3
H3BO3 61.833 g/mol
0.3 G_PER_L CHEBI:33118
boric acid
11 CoCl2 x 6 H2O
2Cl.Co.6H2O 237.929 g/mol
0.2 G_PER_L CHEBI:53503
cobalt chloride hexahydrate
12 CuCl2 x 2 H2O
Cl2Cu.2H2O 170.482 g/mol
0.01 G_PER_L CHEBI:86318
copper(II) chloride dihydrate
13 NiCl2 x 6 H2O
Cl2Ni 129.599 g/mol
0.02 G_PER_L CHEBI:34887
nickel dichloride
14 Na2MoO4 x 2 H2O
2H2O.MoO4.2Na 241.946 g/mol
0.03 G_PER_L CHEBI:75213
sodium molybdate dihydrate

Target organisms

No target organisms are recorded.

Provenance

Merged from 22 source records.

TimestampCuratorActionNotes
2026-01-27T01:15:02.fZ komodo-web-import Imported from KOMODO web table Source: KOMODO, ID: 402
2026-02-03T11:19:15.512897 dsmz-resolver-v1.0 Enriched with DSMZ composition Copied ingredients from DSMZ Medium 402
2026-03-13T06:19:31.114225Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:005217
2026-03-17T06:30:43.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:46.965880+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "ALICYCLOBACILLUS medium" to "alicyclobacillus_medium" for consistent matching
2026-06-05T07:40:23.066870+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 13 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:46:44.805116+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 3 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.
2026-08-06T03:04:48.737534+00:00 recipe-merger Merged 22 duplicate recipes into canonical record Sources: KOMODO_402_ALICYCLOBACILLUS_medium, alicyclobacillus_medium, for_strains_of_a_cycloheptanicus, medium_402_modified_for_dsm_11983, medium_402_modified_for_dsm_14558, medium_402_modified_for_dsm_14745, medium_402_modified_for_dsm_14955, medium_402_modified_for_dsm_16176, medium_402_modified_for_dsm_17614, medium_402_modified_for_dsm_18237, medium_402_modified_for_dsm_2498, medium_402_modified_for_dsm_3922, medium_402_modified_for_dsm_3923, medium_402_modified_for_dsm_3924, medium_402_modified_for_dsm_446, medium_402_modified_for_dsm_448, medium_402_modified_for_dsm_449, medium_402_modified_for_dsm_451, medium_402_modified_for_dsm_452, medium_402_modified_for_dsm_453, medium_402_modified_for_dsm_454, medium_402_modified_for_dsm_455
2026-08-06T03:04:48.737685+00:00 merge_recipes.py MERGED_RECIPES merged 22 source recipe(s) on fingerprint b875278279eabaf2d50958ba22876d4389b3969744a69b4ef48c2f14fa010fb8