sporulation_medium

CultureMech:005909 bacterial COMPLEX SOLID_AGAR
Original name: SPORULATION medium

Overview

External ontology
komodo.medium:531 (source link unavailable) — SPORULATION medium
Applications
  • Microbial cultivation
Synonyms
  • {'name': 'medium_531_modified_for_dsm_1314', 'source': 'KOMODO', 'source_id': 'komodo.medium:531_1314', 'original_category': 'bacterial'}
  • {'name': 'medium_531_modified_for_dsm_4332', 'source': 'KOMODO', 'source_id': 'komodo.medium:531_4332', 'original_category': 'bacterial'}
  • {'name': 'medium_531_modified_for_dsm_4333', 'source': 'KOMODO', 'source_id': 'komodo.medium:531_4333', 'original_category': 'bacterial'}
  • {'name': 'medium_531_modified_for_dsm_4334', 'source': 'KOMODO', 'source_id': 'komodo.medium:531_4334', 'original_category': 'bacterial'}
  • {'name': 'medium_531_modified_for_dsm_4335', 'source': 'KOMODO', 'source_id': 'komodo.medium:531_4335', 'original_category': 'bacterial'}
  • {'name': 'medium_531_modified_for_dsm_6800', 'source': 'KOMODO', 'source_id': 'komodo.medium:531_6800', 'original_category': 'bacterial'}
  • {'name': 'medium_531_modified_for_dsm_6801', 'source': 'KOMODO', 'source_id': 'komodo.medium:531_6801', 'original_category': 'bacterial'}
  • {'name': 'medium_531_modified_for_dsm_6802', 'source': 'KOMODO', 'source_id': 'komodo.medium:531_6802', 'original_category': 'bacterial'}
  • {'name': 'medium_531_modified_for_dsm_6803', 'source': 'KOMODO', 'source_id': 'komodo.medium:531_6803', 'original_category': 'bacterial'}
  • {'name': 'medium_531_modified_for_dsm_6804', 'source': 'KOMODO', 'source_id': 'komodo.medium:531_6804', 'original_category': 'bacterial'}
  • {'name': 'medium_531_modified_for_dsm_6805', 'source': 'KOMODO', 'source_id': 'komodo.medium:531_6805', 'original_category': 'bacterial'}
Notes
Source: KOMODO ModelSEED | ID: 531 | DSMZ Medium: 531 (mediadive.medium:531) | Aerobic: No

Composition

flowchart LR
    CultureMech_005909["sporulation_medium"]
    ing0_Nutrient_broth["Nutrient broth"]
    CultureMech_005909 --> ing0_Nutrient_broth
    ing1_Yeast_extract["Yeast extract"]
    CultureMech_005909 --> ing1_Yeast_extract
    ing2_Trypticase["Trypticase"]
    CultureMech_005909 --> ing2_Trypticase
    ing3_MnSO4_x_H2O["MnSO4 x H2O"]
    CultureMech_005909 --> ing3_MnSO4_x_H2O
    CHEBI_86364["CHEBI:86364"]
    ing3_MnSO4_x_H2O -.-> CHEBI_86364
    ing4_Marine_Broth["Marine Broth"]
    CultureMech_005909 --> ing4_Marine_Broth
    ing5_Agar["Agar"]
    CultureMech_005909 --> ing5_Agar
    CHEBI_2509["CHEBI:2509"]
    ing5_Agar -.-> CHEBI_2509
    ing6_Inosin["Inosin"]
    CultureMech_005909 --> ing6_Inosin
    CHEBI_17596["CHEBI:17596"]
    ing6_Inosin -.-> CHEBI_17596

Ingredients (7)

# Ingredient Concentration Ontology Notes
1 Nutrient broth 6 G_PER_L
2 Yeast extract 1 G_PER_L
3 Trypticase 2 G_PER_L MICRO:0000175 (source link unavailable)
Trypticase peptone
4 MnSO4 x H2O
H2O.Mn.O4S 169.016 g/mol
0.0005 G_PER_L CHEBI:86364
manganese(II) sulfate monohydrate
5 Marine Broth 0.5 G_PER_L
6 Agar 10 G_PER_L CHEBI:2509
agar
7 Inosin
C10H12N4O5 268.229 g/mol
0.00134113 G_PER_L CHEBI:17596
inosine

Target organisms

No target organisms are recorded.

Provenance

Merged from 13 source records.

TimestampCuratorActionNotes
2026-01-27T01:15:03.fZ komodo-web-import Imported from KOMODO web table Source: KOMODO, ID: 531
2026-02-03T11:19:06.945011 dsmz-resolver-v1.0 Enriched with DSMZ composition Copied ingredients from DSMZ Medium 531
2026-03-13T06:19:37.202335Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:005909
2026-03-17T06:30:17.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:53.919702+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "SPORULATION medium" to "sporulation_medium" for consistent matching
2026-06-05T07:40:24.424917+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 3 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-09-22T00:03:26.686152+00:00 repair_rejected_peptone_groundings.py CORRECTED_REJECTED_PEPTONE_GROUNDING CultureMech #484. /ingredients/2/term/id: Trypticase CHEBI:78018 -> MICRO:0000175 (replace_term). Reviewed identities: https://github.com/CultureBotAI/MediaIngredientMech/tree/24562493919391df4468a4285b7c997960cc8868. Publication resolver: MIM label index 9f09e4fb97fb0e6cbbd6f25baca40b36512adb88. MediaDive source IDs and concentrations preserved.
2026-09-22T00:08:50.598342+00:00 recipe-merger Merged 13 duplicate recipes into canonical record Sources: KOMODO_531_SPORULATION_medium, medium_531_modified_for_dsm_1314, medium_531_modified_for_dsm_4332, medium_531_modified_for_dsm_4333, medium_531_modified_for_dsm_4334, medium_531_modified_for_dsm_4335, medium_531_modified_for_dsm_6800, medium_531_modified_for_dsm_6801, medium_531_modified_for_dsm_6802, medium_531_modified_for_dsm_6803, medium_531_modified_for_dsm_6804, medium_531_modified_for_dsm_6805, sporulation_medium
2026-09-22T00:08:50.598412+00:00 merge_recipes.py MERGED_RECIPES merged 13 source recipe(s) on fingerprint e77c7c87ccb1758cd6d3b94b94f0e9dc1843390f3e58b690163af41cfb6b3db6