Overview
- External ontology
- komodo.medium:588 (source link unavailable) — HALOBACTEROIDES HALOBIUS medium
- Applications
-
- Microbial cultivation
- pH
- 6.5
- Notes
- Source: KOMODO ModelSEED | ID: 588 | DSMZ Medium: 588 (mediadive.medium:588) | Aerobic: Yes
Composition
flowchart LR
CultureMech_006067["halobacteroides_halobius_medium"]
ing0_NaCl["NaCl"]
CultureMech_006067 --> ing0_NaCl
CHEBI_26710["CHEBI:26710"]
ing0_NaCl -.-> CHEBI_26710
ing1_MgCl2_x_6_H2O["MgCl2 x 6 H2O"]
CultureMech_006067 --> ing1_MgCl2_x_6_H2O
CHEBI_86345["CHEBI:86345"]
ing1_MgCl2_x_6_H2O -.-> CHEBI_86345
ing2_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
CultureMech_006067 --> ing2_CaCl2_x_2_H2O
CHEBI_86158["CHEBI:86158"]
ing2_CaCl2_x_2_H2O -.-> CHEBI_86158
ing3_KCl["KCl"]
CultureMech_006067 --> ing3_KCl
CHEBI_32588["CHEBI:32588"]
ing3_KCl -.-> CHEBI_32588
ing4_Yeast_extract["Yeast extract"]
CultureMech_006067 --> ing4_Yeast_extract
ing5_L_Cysteine_HCl_x_H2O["L-Cysteine HCl x H2O"]
CultureMech_006067 --> ing5_L_Cysteine_HCl_x_H2O
CHEBI_91248["CHEBI:91248"]
ing5_L_Cysteine_HCl_x_H2O -.-> CHEBI_91248
ing6_Resazurin["Resazurin"]
CultureMech_006067 --> ing6_Resazurin
CHEBI_8806["CHEBI:8806"]
ing6_Resazurin -.-> CHEBI_8806
ing7_Glucose["Glucose"]
CultureMech_006067 --> ing7_Glucose
CHEBI_17234["CHEBI:17234"]
ing7_Glucose -.-> CHEBI_17234
ing8_PIPES["PIPES"]
CultureMech_006067 --> ing8_PIPES
CHEBI_39033["CHEBI:39033"]
ing8_PIPES -.-> CHEBI_39033
Ingredients (9)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
NaCl
Cl.Na 58.443 g/mol
|
87.8 G_PER_L |
CHEBI:26710
sodium chloride
|
|
| 2 |
MgCl2 x 6 H2O
2Cl.6H2O.Mg 203.301 g/mol
|
20.3 G_PER_L |
CHEBI:86345
magnesium dichloride hexahydrate
|
|
| 3 |
CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
|
7.35 G_PER_L |
CHEBI:86158
calcium chloride dihydrate
|
|
| 4 |
KCl
Cl.K 74.551 g/mol
|
3.7 G_PER_L |
CHEBI:32588
potassium chloride
|
|
| 5 | Yeast extract | 5 G_PER_L | ||
| 6 |
L-Cysteine HCl x H2O
C3H7NO2S.H2O.HCl 175.637 g/mol
|
0.5 G_PER_L |
CHEBI:91248
L-cysteine hydrochloride hydrate
|
|
| 7 |
Resazurin
C12H7NO4 229.191 g/mol
|
0.0001 G_PER_L |
CHEBI:8806
Resazurin
|
|
| 8 |
Glucose
C6H12O6 180.156 g/mol
|
5 G_PER_L |
CHEBI:17234
glucose
|
|
| 9 | PIPES | 12.096 G_PER_L |
CHEBI:39033
PIPES
|
Target organisms
No target organisms are recorded.
Provenance
Merged from 2 source records.
- KOMODO_588_HALOBACTEROIDES_HALOBIUS_medium (CultureMech:006067)
- halobacteroides_halobius_medium (CultureMech:001715)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:03.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 588 |
| 2026-02-03T11:18:54.535215 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 588 |
| 2026-03-13T06:19:38.035413Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:006067 |
| 2026-03-17T06:29:39.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:54.900580+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "HALOBACTEROIDES HALOBIUS medium" to "halobacteroides_halobius_medium" for consistent matching |
| 2026-06-05T07:40:24.732167+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 8 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-08-06T03:04:55.793641+00:00 | recipe-merger | Merged 2 duplicate recipes into canonical record | Sources: KOMODO_588_HALOBACTEROIDES_HALOBIUS_medium, halobacteroides_halobius_medium |
| 2026-08-06T03:04:55.793678+00:00 | merge_recipes.py | MERGED_RECIPES | merged 2 source recipe(s) on fingerprint 9b652e46fde641464549a22223cbde431b9577a6ed7ebbde0c596faaf664d7d8 |