Overview
- External ontology
- komodo.medium:928 (source link unavailable) — ROSEINATRONOBACTER medium
- Applications
-
- Microbial cultivation
- pH
- 10.0
- Notes
- Source: KOMODO ModelSEED | ID: 928 | DSMZ Medium: 928 (mediadive.medium:928) | Aerobic: No
Composition
flowchart LR
CultureMech_006846["roseinatronobacter_medium"]
ing0_Na2CO3["Na2CO3"]
CultureMech_006846 --> ing0_Na2CO3
CHEBI_29377["CHEBI:29377"]
ing0_Na2CO3 -.-> CHEBI_29377
ing1_NaHCO3["NaHCO3"]
CultureMech_006846 --> ing1_NaHCO3
CHEBI_32139["CHEBI:32139"]
ing1_NaHCO3 -.-> CHEBI_32139
ing2_NaCl["NaCl"]
CultureMech_006846 --> ing2_NaCl
CHEBI_26710["CHEBI:26710"]
ing2_NaCl -.-> CHEBI_26710
ing3_KNO3["KNO3"]
CultureMech_006846 --> ing3_KNO3
CHEBI_63043["CHEBI:63043"]
ing3_KNO3 -.-> CHEBI_63043
ing4_K2HPO4["K2HPO4"]
CultureMech_006846 --> ing4_K2HPO4
CHEBI_131527["CHEBI:131527"]
ing4_K2HPO4 -.-> CHEBI_131527
ing5_Yeast_extract["Yeast extract"]
CultureMech_006846 --> ing5_Yeast_extract
ing6_Peptone["Peptone"]
CultureMech_006846 --> ing6_Peptone
ing7_Sodium_acetate["Sodium acetate"]
CultureMech_006846 --> ing7_Sodium_acetate
CHEBI_32954["CHEBI:32954"]
ing7_Sodium_acetate -.-> CHEBI_32954
ing8_MgSO4["MgSO4"]
CultureMech_006846 --> ing8_MgSO4
CHEBI_32599["CHEBI:32599"]
ing8_MgSO4 -.-> CHEBI_32599
ing9_Agar["Agar"]
CultureMech_006846 --> ing9_Agar
CHEBI_2509["CHEBI:2509"]
ing9_Agar -.-> CHEBI_2509
ing10_EDTA["EDTA"]
CultureMech_006846 --> ing10_EDTA
CHEBI_4735["CHEBI:4735"]
ing10_EDTA -.-> CHEBI_4735
ing11_FeSO4_x_7_H2O["FeSO4 x 7 H2O"]
CultureMech_006846 --> ing11_FeSO4_x_7_H2O
CHEBI_75836["CHEBI:75836"]
ing11_FeSO4_x_7_H2O -.-> CHEBI_75836
ing12_ZnSO4_x_7_H2O["ZnSO4 x 7 H2O"]
CultureMech_006846 --> ing12_ZnSO4_x_7_H2O
CHEBI_32312["CHEBI:32312"]
ing12_ZnSO4_x_7_H2O -.-> CHEBI_32312
ing13_MnCl2_x_4_H2O["MnCl2 x 4 H2O"]
CultureMech_006846 --> ing13_MnCl2_x_4_H2O
CHEBI_86368["CHEBI:86368"]
ing13_MnCl2_x_4_H2O -.-> CHEBI_86368
ing14_H3BO3["H3BO3"]
CultureMech_006846 --> ing14_H3BO3
CHEBI_33118["CHEBI:33118"]
ing14_H3BO3 -.-> CHEBI_33118
ing15_CoCl2_x_6_H2O["CoCl2 x 6 H2O"]
CultureMech_006846 --> ing15_CoCl2_x_6_H2O
CHEBI_53503["CHEBI:53503"]
ing15_CoCl2_x_6_H2O -.-> CHEBI_53503
ing16_CuCl2_x_2_H2O["CuCl2 x 2 H2O"]
CultureMech_006846 --> ing16_CuCl2_x_2_H2O
CHEBI_86318["CHEBI:86318"]
ing16_CuCl2_x_2_H2O -.-> CHEBI_86318
ing17_NiCl2_x_6_H2O["NiCl2 x 6 H2O"]
CultureMech_006846 --> ing17_NiCl2_x_6_H2O
CHEBI_34887["CHEBI:34887"]
ing17_NiCl2_x_6_H2O -.-> CHEBI_34887
ing18_Na2MoO4_x_2_H2O["Na2MoO4 x 2 H2O"]
CultureMech_006846 --> ing18_Na2MoO4_x_2_H2O
CHEBI_75213["CHEBI:75213"]
ing18_Na2MoO4_x_2_H2O -.-> CHEBI_75213
Ingredients (19)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Na2CO3
CO3.2Na 105.988 g/mol
|
22 G_PER_L |
CHEBI:29377
sodium carbonate
|
|
| 2 |
NaHCO3
CHO3.Na 84.006 g/mol
|
8 G_PER_L |
CHEBI:32139
sodium hydrogencarbonate
|
|
| 3 |
NaCl
Cl.Na 58.443 g/mol
|
5 G_PER_L |
CHEBI:26710
sodium chloride
|
|
| 4 |
KNO3
K.NO3 101.102 g/mol
|
0.5 G_PER_L |
CHEBI:63043
potassium nitrate
|
|
| 5 |
K2HPO4
HO4P.2K 174.174 g/mol
|
0.5 G_PER_L |
CHEBI:131527
dipotassium hydrogen phosphate
|
|
| 6 | Yeast extract | 1 G_PER_L | ||
| 7 | Peptone | 1 G_PER_L | ||
| 8 |
Sodium acetate
C2H3O2.Na 82.034 g/mol
|
1.6 G_PER_L |
CHEBI:32954
sodium acetate
|
|
| 9 |
MgSO4
Mg.O4S 120.368 g/mol
|
0.06 G_PER_L |
CHEBI:32599
magnesium sulfate
|
|
| 10 | Agar | 20 G_PER_L |
CHEBI:2509
agar
|
Optional ingredient (for solid medium) |
| 11 |
EDTA
C10H16N2O8 292.244 g/mol
|
5 G_PER_L |
CHEBI:4735
ethylenediaminetetraacetic acid
|
|
| 12 |
FeSO4 x 7 H2O
Fe.7H2O.O4S 278.013 g/mol
|
2.2 G_PER_L |
CHEBI:75836
iron(2+) sulfate heptahydrate
|
|
| 13 |
ZnSO4 x 7 H2O
7H2O.O4S.Zn 287.558 g/mol
|
0.1 G_PER_L |
CHEBI:32312
zinc sulfate heptahydrate
|
|
| 14 |
MnCl2 x 4 H2O
Cl2Mn.4H2O 197.904 g/mol
|
0.03 G_PER_L |
CHEBI:86368
manganese(II) chloride tetrahydrate
|
|
| 15 |
H3BO3
H3BO3 61.833 g/mol
|
0.03 G_PER_L |
CHEBI:33118
boric acid
|
|
| 16 |
CoCl2 x 6 H2O
2Cl.Co.6H2O 237.929 g/mol
|
0.2 G_PER_L |
CHEBI:53503
cobalt chloride hexahydrate
|
|
| 17 |
CuCl2 x 2 H2O
Cl2Cu.2H2O 170.482 g/mol
|
0.03 G_PER_L |
CHEBI:86318
copper(II) chloride dihydrate
|
|
| 18 |
NiCl2 x 6 H2O
Cl2Ni 129.599 g/mol
|
0.03 G_PER_L |
CHEBI:34887
nickel dichloride
|
|
| 19 |
Na2MoO4 x 2 H2O
2H2O.MoO4.2Na 241.946 g/mol
|
0.03 G_PER_L |
CHEBI:75213
sodium molybdate dihydrate
|
Target organisms
No target organisms are recorded.
Provenance
Merged from 2 source records.
- KOMODO_928_ROSEINATRONOBACTER_medium (CultureMech:006846)
- roseinatronobacter_medium (CultureMech:002100)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:03.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 928 |
| 2026-02-03T11:19:18.412023 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 928 |
| 2026-03-13T06:19:44.290858Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:006846 |
| 2026-03-17T06:30:53.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:02.191789+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "ROSEINATRONOBACTER medium" to "roseinatronobacter_medium" for consistent matching |
| 2026-06-05T07:40:27.854045+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 16 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:37:34.385445+00:00 | primary-term-regrounding-v1.0 | Re-grounded wrong primary term id (OAK-verified) | 1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-06-10T07:46:46.414096+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 5 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-08-06T03:05:01.969860+00:00 | recipe-merger | Merged 2 duplicate recipes into canonical record | Sources: KOMODO_928_ROSEINATRONOBACTER_medium, roseinatronobacter_medium |
| 2026-08-06T03:05:01.969891+00:00 | merge_recipes.py | MERGED_RECIPES | merged 2 source recipe(s) on fingerprint 6a1de37bcf0a4b1b6be82875b65bf33fed829d18d67a40504c6a10515b4da21b |