Overview
- External ontology
- TOGO:M116 — Myxococcus Flavescens Medium
- Applications
-
- Microbial cultivation
- Notes
- Source: https://togomedium.org/medium/M116 Original source: JCM - JCM_M124 Original URL: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=124
Composition
flowchart LR
CultureMech_007694["myxococcus_flavescens_medium"]
ing0_Distilled_water["Distilled water"]
CultureMech_007694 --> ing0_Distilled_water
CHEBI_15377["CHEBI:15377"]
ing0_Distilled_water -.-> CHEBI_15377
ing1_MgSO4_7H2O["MgSO4・7H2O"]
CultureMech_007694 --> ing1_MgSO4_7H2O
CHEBI_31795["CHEBI:31795"]
ing1_MgSO4_7H2O -.-> CHEBI_31795
ing2_Yeast_extract["Yeast extract"]
CultureMech_007694 --> ing2_Yeast_extract
ing3_K2HPO4["K2HPO4"]
CultureMech_007694 --> ing3_K2HPO4
CHEBI_131527["CHEBI:131527"]
ing3_K2HPO4 -.-> CHEBI_131527
ing4_Sucrose["Sucrose"]
CultureMech_007694 --> ing4_Sucrose
CHEBI_17992["CHEBI:17992"]
ing4_Sucrose -.-> CHEBI_17992
ing5_Galactose["Galactose"]
CultureMech_007694 --> ing5_Galactose
CHEBI_28260["CHEBI:28260"]
ing5_Galactose -.-> CHEBI_28260
ing6_Raffinose["Raffinose"]
CultureMech_007694 --> ing6_Raffinose
CHEBI_16634["CHEBI:16634"]
ing6_Raffinose -.-> CHEBI_16634
ing7_Soluble_starch["Soluble starch"]
CultureMech_007694 --> ing7_Soluble_starch
CHEBI_28017["CHEBI:28017"]
ing7_Soluble_starch -.-> CHEBI_28017
ing8_Agar["Agar"]
CultureMech_007694 --> ing8_Agar
CHEBI_2509["CHEBI:2509"]
ing8_Agar -.-> CHEBI_2509
ing9_Casitone__BD_Difco_["Casitone (BD-Difco)"]
CultureMech_007694 --> ing9_Casitone__BD_Difco_
Ingredients (10)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Distilled water
H2O 18.015 g/mol
|
1 G_PER_L |
CHEBI:15377
water
|
Role: Solvating media; Properties: Simple component, Inorganic compound, Defined component |
| 2 |
MgSO4・7H2O
7H2O.Mg.O4S 246.473 g/mol
|
0.5 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
Role: Mineral source; Properties: Defined component, Inorganic compound, Simple component |
| 3 | Yeast extract | 1 G_PER_L | Role: Nutrient source; Properties: Undefined component | |
| 4 |
K2HPO4
HO4P.2K 174.174 g/mol
|
0.25 G_PER_L |
CHEBI:131527
dipotassium hydrogen phosphate
|
Role: Buffer; Properties: Defined component, Simple component, Inorganic compound |
| 5 |
Sucrose
C12H22O11 342.297 g/mol
|
1 G_PER_L |
CHEBI:17992
sucrose
|
Role: Carbon source; Properties: Simple component, Organic compound, Defined component |
| 6 |
Galactose
C6H12O6 180.156 g/mol
|
1 G_PER_L |
CHEBI:28260
galactose
|
Role: Carbon source; Properties: Defined component, Organic compound, Simple component |
| 7 |
Raffinose
C18H32O16 504.438 g/mol
|
1 G_PER_L |
CHEBI:16634
raffinose
|
Role: Carbon source; Properties: Organic compound, Simple component, Defined component |
| 8 | Soluble starch | 5 G_PER_L |
CHEBI:28017
starch
|
Role: Carbon source; Properties: Undefined component |
| 9 | Agar | 15 G_PER_L |
CHEBI:2509
agar
|
Role: Solidifying component |
| 10 | Casitone (BD-Difco) | 2.5 G_PER_L | Properties: Undefined component |
Target organisms
No target organisms are recorded.
Provenance
Merged from 1 source record.
- TOGO_M116_Myxococcus_Flavescens_Medium (CultureMech:007694)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T06:35:54.030924Z | togo-import | Imported from TOGO Medium | Source: JCM, ID: M116 |
| 2026-01-28T19:48:39.070726Z | chebi-enrichment | Added CHEBI ontology terms to ingredients | Enriched using MicrobeMediaParam and MediaDive chemical mappings |
| 2026-03-13T06:19:50.672080Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:007694 |
| 2026-03-17T06:30:48.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:09.074565+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "Myxococcus Flavescens Medium" to "myxococcus_flavescens_medium" for consistent matching |
| 2026-06-05T07:40:30.987065+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 6 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T06:57:21.629798+00:00 | mgso4-heptahydrate-term-fix-v1.0 | Corrected MgSO4·7H2O primary term grounding to heptahydrate | Re-grounded 1 heptahydrate-labelled ingredient(s) from CHEBI:32599 (generic magnesium sulfate) to CHEBI:31795 (magnesium sulfate heptahydrate). Generic/hexahydrate labels untouched. |
| 2026-06-10T07:46:47.102066+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-08-06T03:05:06.281414+00:00 | merge_recipes.py | MERGED_RECIPES | merged 1 source recipe(s) on fingerprint eb1d925252a9d9249fa29a290f139ea27b9ed9a0855e7c813195d6e0716ef341 |