Overview
- External ontology
- TOGO:M1953 — Medium for Strain JA747
- Applications
-
- Microbial cultivation
- Notes
- Source: https://togomedium.org/medium/M1953 Original source: NBRC - NBRC_M1230 Original URL: https://www.nite.go.jp/nbrc/catalogue/NBRCMediumDetailServlet?NO=1230
Composition
flowchart LR
CultureMech_008533["medium_for_strain_ja747"]
ing0_Distilled_water["Distilled water"]
CultureMech_008533 --> ing0_Distilled_water
CHEBI_15377["CHEBI:15377"]
ing0_Distilled_water -.-> CHEBI_15377
ing1_Yeast_extract["Yeast extract"]
CultureMech_008533 --> ing1_Yeast_extract
ing2_NaCl["NaCl"]
CultureMech_008533 --> ing2_NaCl
CHEBI_26710["CHEBI:26710"]
ing2_NaCl -.-> CHEBI_26710
ing3_CaCl2_2H2O["CaCl2·2H2O"]
CultureMech_008533 --> ing3_CaCl2_2H2O
CHEBI_86158["CHEBI:86158"]
ing3_CaCl2_2H2O -.-> CHEBI_86158
ing4_KH2PO4["KH2PO4"]
CultureMech_008533 --> ing4_KH2PO4
CHEBI_63036["CHEBI:63036"]
ing4_KH2PO4 -.-> CHEBI_63036
ing5_NH4Cl["NH4Cl"]
CultureMech_008533 --> ing5_NH4Cl
CHEBI_31206["CHEBI:31206"]
ing5_NH4Cl -.-> CHEBI_31206
ing6_Dextrose["Dextrose"]
CultureMech_008533 --> ing6_Dextrose
CHEBI_17634["CHEBI:17634"]
ing6_Dextrose -.-> CHEBI_17634
ing7_MgCl2_6H2O["MgCl2·6H2O"]
CultureMech_008533 --> ing7_MgCl2_6H2O
CHEBI_86345["CHEBI:86345"]
ing7_MgCl2_6H2O -.-> CHEBI_86345
ing8_KCl["KCl"]
CultureMech_008533 --> ing8_KCl
CHEBI_32588["CHEBI:32588"]
ing8_KCl -.-> CHEBI_32588
ing9_Na2SO4["Na2SO4"]
CultureMech_008533 --> ing9_Na2SO4
CHEBI_32149["CHEBI:32149"]
ing9_Na2SO4 -.-> CHEBI_32149
ing10_Sodium_pyruvate["Sodium pyruvate"]
CultureMech_008533 --> ing10_Sodium_pyruvate
CHEBI_50144["CHEBI:50144"]
ing10_Sodium_pyruvate -.-> CHEBI_50144
ing11_HEPES["HEPES"]
CultureMech_008533 --> ing11_HEPES
CHEBI_46756["CHEBI:46756"]
ing11_HEPES -.-> CHEBI_46756
ing12_Beef_extract["Beef extract"]
CultureMech_008533 --> ing12_Beef_extract
ing13_Casein_hydrolysate["Casein hydrolysate"]
CultureMech_008533 --> ing13_Casein_hydrolysate
ing14_Peptone["Peptone"]
CultureMech_008533 --> ing14_Peptone
Ingredients (15)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Distilled water
H2O 18.015 g/mol
|
1 G_PER_L |
CHEBI:15377
water
|
Role: Solvating media; Properties: Defined component, Simple component, Inorganic compound |
| 2 | Yeast extract | 3 G_PER_L | Role: Nutrient source; Properties: Undefined component | |
| 3 |
NaCl
Cl.Na 58.443 g/mol
|
1 G_PER_L |
CHEBI:26710
sodium chloride
|
Role: Mineral source; Properties: Inorganic compound, Simple component, Defined component |
| 4 |
CaCl2·2H2O
Ca.2Cl.2H2O 147.014 g/mol
|
0.15 G_PER_L |
CHEBI:86158
calcium chloride dihydrate
|
Role: Mineral source; Properties: Defined component, Simple component, Inorganic compound |
| 5 |
KH2PO4
H2O4P.K 136.084 g/mol
|
0.2 G_PER_L |
CHEBI:63036
potassium dihydrogen phosphate
|
Role: Buffer; Properties: Defined component, Inorganic compound, Simple component |
| 6 |
NH4Cl
Cl.H4N 53.492 g/mol
|
0.25 G_PER_L |
CHEBI:31206
ammonium chloride
|
Role: Nitrogen source; Properties: Defined component, Simple component, Inorganic compound |
| 7 |
Dextrose
C6H12O6 180.156 g/mol
|
0.05 G_PER_L |
CHEBI:17634
D-glucose
|
Role: Carbon source; Properties: Organic compound, Simple component, Defined component |
| 8 |
MgCl2·6H2O
2Cl.6H2O.Mg 203.301 g/mol
|
0.62 G_PER_L |
CHEBI:86345
magnesium dichloride hexahydrate
|
Role: Mineral source; Properties: Defined component, Inorganic compound, Simple component |
| 9 |
KCl
Cl.K 74.551 g/mol
|
0.5 G_PER_L |
CHEBI:32588
potassium chloride
|
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component |
| 10 |
Na2SO4
2Na.O4S 142.043 g/mol
|
2.84 G_PER_L |
CHEBI:32149
sodium sulfate
|
Role: Mineral source; Properties: Inorganic compound, Simple component, Defined component |
| 11 |
Sodium pyruvate
C3H3O3.Na 110.044 g/mol
|
3 G_PER_L |
CHEBI:50144
sodium pyruvate
|
Role: Carbon source; Properties: Defined component, Simple component, Organic compound |
| 12 | HEPES | 2.38 G_PER_L |
CHEBI:46756
HEPES
|
Role: Buffer; Properties: Defined component, Simple component, Organic compound |
| 13 | Beef extract | 3 G_PER_L | Properties: Undefined component | |
| 14 | Casein hydrolysate | 0.05 G_PER_L | Properties: Undefined component | |
| 15 | Peptone | 3 G_PER_L |
Target organisms
No target organisms are recorded.
Provenance
Merged from 1 source record.
- medium_for_strain_ja747 (CultureMech:008533)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T06:35:58.735458Z | togo-import | Imported from TOGO Medium | Source: NBRC, ID: M1953 |
| 2026-01-28T19:48:16.554393Z | chebi-enrichment | Added CHEBI ontology terms to ingredients | Enriched using MicrobeMediaParam and MediaDive chemical mappings |
| 2026-03-13T06:19:57.836848Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:008533 |
| 2026-03-17T06:30:00.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:16.461434+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "Medium for Strain JA747" to "medium_for_strain_ja747" for consistent matching |
| 2026-06-05T07:41:29.609782+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 11 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:47:06.253534+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 3 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-08-06T03:05:43.628225+00:00 | merge_recipes.py | MERGED_RECIPES | merged 1 source recipe(s) on fingerprint 97a9be1a8415b2cd7ed2fd03da5e551e66dc920b6045cc6488a8bc314e0ec791 |