Overview
- External ontology
- TOGO:M2130 — 1/10 R2A gellan gum medium2
- Applications
-
- Microbial cultivation
- Notes
- Source: https://togomedium.org/medium/M2130 Original source: NBRC - NBRC_M1462 Original URL: https://www.nite.go.jp/nbrc/catalogue/NBRCMediumDetailServlet?NO=1462
Composition
flowchart LR
CultureMech_008724["1_10_r2a_gellan_gum_medium2"]
ing0_Distilled_water["Distilled water"]
CultureMech_008724 --> ing0_Distilled_water
CHEBI_15377["CHEBI:15377"]
ing0_Distilled_water -.-> CHEBI_15377
ing1_MgSO4_7H2O["MgSO4·7H2O"]
CultureMech_008724 --> ing1_MgSO4_7H2O
CHEBI_31795["CHEBI:31795"]
ing1_MgSO4_7H2O -.-> CHEBI_31795
ing2_CaCl2_2H2O["CaCl2·2H2O"]
CultureMech_008724 --> ing2_CaCl2_2H2O
CHEBI_86158["CHEBI:86158"]
ing2_CaCl2_2H2O -.-> CHEBI_86158
ing3_K2HPO4["K2HPO4"]
CultureMech_008724 --> ing3_K2HPO4
CHEBI_131527["CHEBI:131527"]
ing3_K2HPO4 -.-> CHEBI_131527
ing4_Sodium_pyruvate["Sodium pyruvate"]
CultureMech_008724 --> ing4_Sodium_pyruvate
CHEBI_50144["CHEBI:50144"]
ing4_Sodium_pyruvate -.-> CHEBI_50144
ing5_Gellan_gum__if_needed_["Gellan gum (if needed)"]
CultureMech_008724 --> ing5_Gellan_gum__if_needed_
ing6_Glucose["Glucose"]
CultureMech_008724 --> ing6_Glucose
CHEBI_17234["CHEBI:17234"]
ing6_Glucose -.-> CHEBI_17234
ing7_Soluble_starch["Soluble starch"]
CultureMech_008724 --> ing7_Soluble_starch
CHEBI_28017["CHEBI:28017"]
ing7_Soluble_starch -.-> CHEBI_28017
ing8_Bacto_Yeast_Extract__Difco_["Bacto Yeast Extract (Difco)"]
CultureMech_008724 --> ing8_Bacto_Yeast_Extract__Difco_
ing9_Bacto_Proteose_Peptone_No__3__Difco_["Bacto Proteose Peptone No. 3 (Difco)"]
CultureMech_008724 --> ing9_Bacto_Proteose_Peptone_No__3__Difco_
ing10_Bacto_Casamino_Acids__Difco_["Bacto Casamino Acids (Difco)"]
CultureMech_008724 --> ing10_Bacto_Casamino_Acids__Difco_
Ingredients (11)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Distilled water
H2O 18.015 g/mol
|
1 G_PER_L |
CHEBI:15377
water
|
Role: Solvating media; Properties: Defined component, Inorganic compound, Simple component |
| 2 |
MgSO4·7H2O
7H2O.Mg.O4S 246.473 g/mol
|
0.005 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
Role: Mineral source; Properties: Defined component, Simple component, Inorganic compound |
| 3 |
CaCl2·2H2O
Ca.2Cl.2H2O 147.014 g/mol
|
2 G_PER_L |
CHEBI:86158
calcium chloride dihydrate
|
Role: Mineral source; Properties: Defined component, Simple component, Inorganic compound |
| 4 |
K2HPO4
HO4P.2K 174.174 g/mol
|
0.03 G_PER_L |
CHEBI:131527
dipotassium hydrogen phosphate
|
Role: Buffer; Properties: Simple component, Inorganic compound, Defined component |
| 5 |
Sodium pyruvate
C3H3O3.Na 110.044 g/mol
|
0.03 G_PER_L |
CHEBI:50144
sodium pyruvate
|
Role: Carbon source; Properties: Defined component, Simple component, Organic compound |
| 6 | Gellan gum (if needed) | 15 G_PER_L | Role: Solidifying component; Properties: Undefined component, Organic compound | |
| 7 |
Glucose
C6H12O6 180.156 g/mol
|
0.05 G_PER_L |
CHEBI:17234
glucose
|
Role: Carbon source; Properties: Defined component, Organic compound, Simple component |
| 8 | Soluble starch | 0.05 G_PER_L |
CHEBI:28017
starch
|
Role: Carbon source; Properties: Undefined component |
| 9 | Bacto Yeast Extract (Difco) | 0.05 G_PER_L | Properties: Undefined component | |
| 10 | Bacto Proteose Peptone No. 3 (Difco) | 0.05 G_PER_L | Properties: Undefined component | |
| 11 | Bacto Casamino Acids (Difco) | 0.05 G_PER_L | Properties: Undefined component |
Target organisms
No target organisms are recorded.
Provenance
Merged from 1 source record.
- 1_10_r2a_gellan_gum_medium2 (CultureMech:008724)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T06:35:59.135384Z | togo-import | Imported from TOGO Medium | Source: NBRC, ID: M2130 |
| 2026-01-28T19:48:22.599641Z | chebi-enrichment | Added CHEBI ontology terms to ingredients | Enriched using MicrobeMediaParam and MediaDive chemical mappings |
| 2026-03-13T06:19:59.818808Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:008724 |
| 2026-03-17T06:30:13.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:18.462285+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "1/10 R2A gellan gum medium2" to "1_10_r2a_gellan_gum_medium2" for consistent matching |
| 2026-06-05T07:40:15.412724+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 6 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T06:57:12.272134+00:00 | mgso4-heptahydrate-term-fix-v1.0 | Corrected MgSO4·7H2O primary term grounding to heptahydrate | Re-grounded 1 heptahydrate-labelled ingredient(s) from CHEBI:32599 (generic magnesium sulfate) to CHEBI:31795 (magnesium sulfate heptahydrate). Generic/hexahydrate labels untouched. |
| 2026-06-10T07:46:42.474082+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-08-06T03:04:33.513490+00:00 | merge_recipes.py | MERGED_RECIPES | merged 1 source recipe(s) on fingerprint 0fc024c1081146797deb830ca46bd1159dcb43b78242df854aedc5d861db4c31 |