Overview
- External ontology
- TOGO:M2284 — Persephonella Medium
- Applications
-
- Microbial cultivation
- High-metal flag
- True
- Notes
- Source: https://togomedium.org/medium/M2284 Original URL: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium996.pdf
Composition
flowchart LR
CultureMech_008870["persephonella_medium"]
ing0_Distilled_water["Distilled water"]
CultureMech_008870 --> ing0_Distilled_water
CHEBI_15377["CHEBI:15377"]
ing0_Distilled_water -.-> CHEBI_15377
ing1_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
CultureMech_008870 --> ing1_MgSO4_x_7_H2O
CHEBI_31795["CHEBI:31795"]
ing1_MgSO4_x_7_H2O -.-> CHEBI_31795
ing2_NaCl["NaCl"]
CultureMech_008870 --> ing2_NaCl
CHEBI_26710["CHEBI:26710"]
ing2_NaCl -.-> CHEBI_26710
ing3_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
CultureMech_008870 --> ing3_CaCl2_x_2_H2O
CHEBI_86158["CHEBI:86158"]
ing3_CaCl2_x_2_H2O -.-> CHEBI_86158
ing4_NH4Cl["NH4Cl"]
CultureMech_008870 --> ing4_NH4Cl
CHEBI_31206["CHEBI:31206"]
ing4_NH4Cl -.-> CHEBI_31206
ing5_MgCl2_x_6_H2O["MgCl2 x 6 H2O"]
CultureMech_008870 --> ing5_MgCl2_x_6_H2O
CHEBI_86345["CHEBI:86345"]
ing5_MgCl2_x_6_H2O -.-> CHEBI_86345
ing6_KCl["KCl"]
CultureMech_008870 --> ing6_KCl
CHEBI_32588["CHEBI:32588"]
ing6_KCl -.-> CHEBI_32588
ing7_K2HPO4x_3_H2O["K2HPO4x 3 H2O"]
CultureMech_008870 --> ing7_K2HPO4x_3_H2O
CHEBI_131527["CHEBI:131527"]
ing7_K2HPO4x_3_H2O -.-> CHEBI_131527
ing8_Na2S2O3_x_5_H2O["Na2S2O3 x 5 H2O"]
CultureMech_008870 --> ing8_Na2S2O3_x_5_H2O
CHEBI_32150["CHEBI:32150"]
ing8_Na2S2O3_x_5_H2O -.-> CHEBI_32150
ing9_NaOH["NaOH"]
CultureMech_008870 --> ing9_NaOH
CHEBI_32145["CHEBI:32145"]
ing9_NaOH -.-> CHEBI_32145
ing10_H2SO4["H2SO4"]
CultureMech_008870 --> ing10_H2SO4
CHEBI_26836["CHEBI:26836"]
ing10_H2SO4 -.-> CHEBI_26836
ing11_CO2["CO2"]
CultureMech_008870 --> ing11_CO2
CHEBI_16526["CHEBI:16526"]
ing11_CO2 -.-> CHEBI_16526
ing12_O2["O2"]
CultureMech_008870 --> ing12_O2
ing13_H2["H2"]
CultureMech_008870 --> ing13_H2
CHEBI_18276["CHEBI:18276"]
ing13_H2 -.-> CHEBI_18276
ing14_Na2MoO4_x_2_H2O["Na2MoO4 x 2 H2O"]
CultureMech_008870 --> ing14_Na2MoO4_x_2_H2O
CHEBI_75213["CHEBI:75213"]
ing14_Na2MoO4_x_2_H2O -.-> CHEBI_75213
ing15_H3BO3["H3BO3"]
CultureMech_008870 --> ing15_H3BO3
CHEBI_33118["CHEBI:33118"]
ing15_H3BO3 -.-> CHEBI_33118
ing16_FeSO4_x_7_H2O["FeSO4 x 7 H2O"]
CultureMech_008870 --> ing16_FeSO4_x_7_H2O
CHEBI_75836["CHEBI:75836"]
ing16_FeSO4_x_7_H2O -.-> CHEBI_75836
ing17_MnCl2_x_4_H2O["MnCl2 x 4 H2O"]
CultureMech_008870 --> ing17_MnCl2_x_4_H2O
CHEBI_86368["CHEBI:86368"]
ing17_MnCl2_x_4_H2O -.-> CHEBI_86368
ing18_CoCl2_x_6_H2O["CoCl2 x 6 H2O"]
CultureMech_008870 --> ing18_CoCl2_x_6_H2O
CHEBI_53503["CHEBI:53503"]
ing18_CoCl2_x_6_H2O -.-> CHEBI_53503
ing19_ZnCl2["ZnCl2"]
CultureMech_008870 --> ing19_ZnCl2
CHEBI_49976["CHEBI:49976"]
ing19_ZnCl2 -.-> CHEBI_49976
ing20_Na2O4W_x_2_H2O["Na2O4W x 2 H2O"]
CultureMech_008870 --> ing20_Na2O4W_x_2_H2O
ing21_Ni2SO4x_6_H2O["Ni2SO4x 6 H2O"]
CultureMech_008870 --> ing21_Ni2SO4x_6_H2O
ing22_AlCl3_x_6_H2O["AlCl3 x 6 H2O"]
CultureMech_008870 --> ing22_AlCl3_x_6_H2O
CHEBI_30115["CHEBI:30115"]
ing22_AlCl3_x_6_H2O -.-> CHEBI_30115
ing23_H2SeO3_selenous_acid_["H2SeO3(selenous acid)"]
CultureMech_008870 --> ing23_H2SeO3_selenous_acid_
ing24_CuCl["CuCl"]
CultureMech_008870 --> ing24_CuCl
CHEBI_53472["CHEBI:53472"]
ing24_CuCl -.-> CHEBI_53472
ing25_Na_EDTA_x_2_H2O["Na-EDTA x 2 H2O"]
CultureMech_008870 --> ing25_Na_EDTA_x_2_H2O
CHEBI_64758["CHEBI:64758"]
ing25_Na_EDTA_x_2_H2O -.-> CHEBI_64758
Ingredients (26)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Distilled water
H2O 18.015 g/mol
|
990 G_PER_L |
CHEBI:15377
water
|
Role: Solvating media; Properties: Inorganic compound, Defined component, Simple component |
| 2 |
MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
|
7 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component |
| 3 |
NaCl
Cl.Na 58.443 g/mol
|
29 G_PER_L |
CHEBI:26710
sodium chloride
|
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component |
| 4 |
CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
|
0.4 G_PER_L |
CHEBI:86158
calcium chloride dihydrate
|
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component |
| 5 |
NH4Cl
Cl.H4N 53.492 g/mol
|
0.2 G_PER_L |
CHEBI:31206
ammonium chloride
|
Role: Nitrogen source; Properties: Inorganic compound, Defined component, Simple component |
| 6 |
MgCl2 x 6 H2O
2Cl.6H2O.Mg 203.301 g/mol
|
1.36 G_PER_L |
CHEBI:86345
magnesium dichloride hexahydrate
|
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component |
| 7 |
KCl
Cl.K 74.551 g/mol
|
0.5 G_PER_L |
CHEBI:32588
potassium chloride
|
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component |
| 8 |
K2HPO4x 3 H2O
HO4P.2K 174.174 g/mol
|
0.3 G_PER_L |
CHEBI:131527
dipotassium hydrogen phosphate
|
Role: Buffer; Properties: Inorganic compound, Defined component, Simple component |
| 9 |
Na2S2O3 x 5 H2O
5H2O.2Na.O3S2 248.186 g/mol
|
2 G_PER_L |
CHEBI:32150
sodium thiosulfate pentahydrate
|
Properties: Defined component, Inorganic compound, Simple component |
| 10 |
NaOH
HO.Na 39.997 g/mol
|
2 G_PER_L |
CHEBI:32145
sodium hydroxide
|
Properties: Defined component, Inorganic compound, Simple component |
| 11 |
H2SO4
H2O4S 98.079 g/mol
|
variable VARIABLE |
CHEBI:26836
sulfuric acid
|
Role: Mineral source; Properties: Defined component, Inorganic compound, Solution |
| 12 |
CO2
CO2 44.009 g/mol
|
variable VARIABLE |
CHEBI:16526
carbon dioxide
|
Properties: ガス |
| 13 | O2 | variable VARIABLE | Properties: ガス | |
| 14 |
H2
H2 2.016 g/mol
|
variable VARIABLE |
CHEBI:18276
dihydrogen
|
Properties: ガス |
| 15 |
Na2MoO4 x 2 H2O
2H2O.MoO4.2Na 241.946 g/mol
|
10 G_PER_L |
CHEBI:75213
sodium molybdate dihydrate
|
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component |
| 16 |
H3BO3
H3BO3 61.833 g/mol
|
10 G_PER_L |
CHEBI:33118
boric acid
|
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component |
| 17 |
FeSO4 x 7 H2O
Fe.7H2O.O4S 278.013 g/mol
|
100 G_PER_L |
CHEBI:75836
iron(2+) sulfate heptahydrate
|
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component |
| 18 |
MnCl2 x 4 H2O
Cl2Mn.4H2O 197.904 g/mol
|
100 G_PER_L |
CHEBI:86368
manganese(II) chloride tetrahydrate
|
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component |
| 19 |
CoCl2 x 6 H2O
2Cl.Co.6H2O 237.929 g/mol
|
150 G_PER_L |
CHEBI:53503
cobalt chloride hexahydrate
|
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component |
| 20 |
ZnCl2
2Cl.Zn 136.296 g/mol
|
100 G_PER_L |
CHEBI:49976
zinc dichloride
|
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component |
| 21 | Na2O4W x 2 H2O | 30 G_PER_L | Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component | |
| 22 | Ni2SO4x 6 H2O | 20 G_PER_L | Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component | |
| 23 |
AlCl3 x 6 H2O
AlCl3.6H2O 241.431 g/mol
|
40 G_PER_L |
CHEBI:30115
aluminium trichloride hexahydrate
|
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component |
| 24 | H2SeO3(selenous acid) | 10 G_PER_L | Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component | |
| 25 |
CuCl
ClCu 98.999 g/mol
|
20 G_PER_L |
CHEBI:53472
copper(I) chloride
|
Role: Mineral source |
| 26 |
Na-EDTA x 2 H2O
C10H14N2O8.2H2O.2Na 372.238 g/mol
|
500 G_PER_L |
CHEBI:64758
EDTA disodium salt dihydrate
|
Properties: Simple component, Organic compound, Defined component |
Solutions
Trace element solution (see below)
Dose: 10 G_PER_L
Target organisms
No target organisms are recorded.
Provenance
Merged from 1 source record.
- TOGO_M2284_Persephonella_Medium (CultureMech:008870)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T06:35:56.277134Z | togo-import | Imported from TOGO Medium | Source: TOGO, ID: M2284 |
| 2026-01-28T19:48:17.642018Z | chebi-enrichment | Added CHEBI ontology terms to ingredients | Enriched using MicrobeMediaParam and MediaDive chemical mappings |
| 2026-02-03T00:00:00+00:00 | schema-defaulter-v1.0 | Applied schema defaults and normalizations | Added default concentration for ingredient: H2SO4; Added default concentration for ingredient: CO2; Added default concentration for ingredient: O2; Added default concentration for ingredient: H2 |
| 2026-03-09T08:04:29.229883+00:00 | solution-migrator-v1.0 | Migrated solutions from ingredients to solutions array | Moved 1 solution(s) from ingredients |
| 2026-03-13T06:20:00.924002Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:008870 |
| 2026-03-14T00:00:00+00:00 | schema-defaulter-v1.0 | Applied schema defaults and normalizations | Added default solution name |
| 2026-03-17T06:30:03.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:19.616682+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "Persephonella Medium" to "persephonella_medium" for consistent matching |
| 2026-05-16T09:03:12.844525+00:00 | migrate_legacy_fields.py | MIGRATED_LEGACY_FIELDS | curation_history.date->timestamp=2 |
| 2026-06-05T07:40:36.023944+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 20 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T06:57:25.949049+00:00 | mgso4-heptahydrate-term-fix-v1.0 | Corrected MgSO4·7H2O primary term grounding to heptahydrate | Re-grounded 1 heptahydrate-labelled ingredient(s) from CHEBI:32599 (generic magnesium sulfate) to CHEBI:31795 (magnesium sulfate heptahydrate). Generic/hexahydrate labels untouched. |
| 2026-06-10T07:46:48.778617+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 3 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-08-06T03:05:10.971410+00:00 | merge_recipes.py | MERGED_RECIPES | merged 1 source recipe(s) on fingerprint 849ec992af8b1bd5bb1d339558517cb729ae76a44120862e04718a995137e3c0 |