Overview
- External ontology
- TOGO:M2638 — Selenomonas Ruminantium Medium
- Applications
-
- Microbial cultivation
- Notes
- Source: https://togomedium.org/medium/M2638 Original URL: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium181.pdf
Composition
flowchart LR
CultureMech_009195["selenomonas_ruminantium_medium"]
ing0_Distilled_water["Distilled water"]
CultureMech_009195 --> ing0_Distilled_water
CHEBI_15377["CHEBI:15377"]
ing0_Distilled_water -.-> CHEBI_15377
ing1_Yeast_extract["Yeast extract"]
CultureMech_009195 --> ing1_Yeast_extract
ing2_KH2PO4["KH2PO4"]
CultureMech_009195 --> ing2_KH2PO4
CHEBI_63036["CHEBI:63036"]
ing2_KH2PO4 -.-> CHEBI_63036
ing3_Resazurin["Resazurin"]
CultureMech_009195 --> ing3_Resazurin
CHEBI_8806["CHEBI:8806"]
ing3_Resazurin -.-> CHEBI_8806
ing4_Na_acetate["Na-acetate"]
CultureMech_009195 --> ing4_Na_acetate
CHEBI_32954["CHEBI:32954"]
ing4_Na_acetate -.-> CHEBI_32954
ing5_Na2CO3["Na2CO3"]
CultureMech_009195 --> ing5_Na2CO3
CHEBI_29377["CHEBI:29377"]
ing5_Na2CO3 -.-> CHEBI_29377
ing6_n_Valeric_acid["n-Valeric acid"]
CultureMech_009195 --> ing6_n_Valeric_acid
CHEBI_17418["CHEBI:17418"]
ing6_n_Valeric_acid -.-> CHEBI_17418
ing7_Glucose["Glucose"]
CultureMech_009195 --> ing7_Glucose
CHEBI_17234["CHEBI:17234"]
ing7_Glucose -.-> CHEBI_17234
ing8_Trypticase__BBL_["Trypticase (BBL)"]
CultureMech_009195 --> ing8_Trypticase__BBL_
ing9_Cysteine_HCl_x_H2O["Cysteine-HCl x H2O"]
CultureMech_009195 --> ing9_Cysteine_HCl_x_H2O
CHEBI_91248["CHEBI:91248"]
ing9_Cysteine_HCl_x_H2O -.-> CHEBI_91248
ing10_CO2["CO2"]
CultureMech_009195 --> ing10_CO2
CHEBI_16526["CHEBI:16526"]
ing10_CO2 -.-> CHEBI_16526
Ingredients (11)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Distilled water
H2O 18.015 g/mol
|
1000 G_PER_L |
CHEBI:15377
water
|
Role: Solvating media; Properties: Defined component, Simple component, Inorganic compound |
| 2 | Yeast extract | 2 G_PER_L | Role: Nutrient source; Properties: Undefined component | |
| 3 |
KH2PO4
H2O4P.K 136.084 g/mol
|
1 G_PER_L |
CHEBI:63036
potassium dihydrogen phosphate
|
Role: Buffer; Properties: Defined component, Simple component, Inorganic compound |
| 4 |
Resazurin
C12H7NO4 229.191 g/mol
|
1 G_PER_L |
CHEBI:8806
Resazurin
|
Role: pH dependent redox indicator; Properties: Simple component, Organic compound, Defined component |
| 5 |
Na-acetate
C2H3O2.Na 82.034 g/mol
|
4 G_PER_L |
CHEBI:32954
sodium acetate
|
Role: Buffer; Properties: Defined component, Organic compound, Simple component |
| 6 |
Na2CO3
CO3.2Na 105.988 g/mol
|
4 G_PER_L |
CHEBI:29377
sodium carbonate
|
Role: Buffer; Properties: Defined component, Inorganic compound, Simple component |
| 7 |
n-Valeric acid
C5H10O2 102.133 g/mol
|
0.1 G_PER_L |
CHEBI:17418
valeric acid
|
Role: Carbon source; Properties: Organic compound, Simple component, Defined component |
| 8 |
Glucose
C6H12O6 180.156 g/mol
|
1 G_PER_L |
CHEBI:17234
glucose
|
Role: Carbon source; Properties: Simple component, Organic compound, Defined component |
| 9 | Trypticase (BBL) | 5 G_PER_L | Properties: Undefined component | |
| 10 |
Cysteine-HCl x H2O
C3H7NO2S.H2O.HCl 175.637 g/mol
|
0.5 G_PER_L |
CHEBI:91248
L-cysteine hydrochloride hydrate
|
Properties: Defined component, Simple component, Organic compound |
| 11 |
CO2
CO2 44.009 g/mol
|
variable VARIABLE |
CHEBI:16526
carbon dioxide
|
Properties: Gas |
Target organisms
No target organisms are recorded.
Provenance
Merged from 1 source record.
- TOGO_M2638_Selenomonas_Ruminantium_Medium (CultureMech:009195)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T06:35:56.901682Z | togo-import | Imported from TOGO Medium | Source: TOGO, ID: M2638 |
| 2026-01-28T19:48:29.847440Z | chebi-enrichment | Added CHEBI ontology terms to ingredients | Enriched using MicrobeMediaParam and MediaDive chemical mappings |
| 2026-02-03T00:00:00+00:00 | schema-defaulter-v1.0 | Applied schema defaults and normalizations | Added default concentration for ingredient: CO2 |
| 2026-03-13T06:20:03.859126Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:009195 |
| 2026-03-17T06:30:28.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:22.588392+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "Selenomonas Ruminantium Medium" to "selenomonas_ruminantium_medium" for consistent matching |
| 2026-05-16T09:03:14.768269+00:00 | migrate_legacy_fields.py | MIGRATED_LEGACY_FIELDS | curation_history.date->timestamp=1 |
| 2026-06-05T07:40:38.044132+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 8 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:46:49.462317+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 3 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-08-06T03:05:12.966354+00:00 | merge_recipes.py | MERGED_RECIPES | merged 1 source recipe(s) on fingerprint edc0c0c8e49f5eca637253eb4a88462d4f376abe58888d2f61a231e75682a6b9 |