modified_ycfa_medium (CultureMech:009545)

Overview

External ontology

TOGO:M3033 — Modified YCFA Medium

Applications

Microbial cultivation

Notes

Source: https://togomedium.org/medium/M3033 Original source: JCM - JCM_M1407 Original URL: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=1407

Composition

flowchart LR
    CultureMech_009545["modified_ycfa_medium"]
    ing0_Distilled_water["Distilled water"]
    CultureMech_009545 --> ing0_Distilled_water
    CHEBI_15377["CHEBI:15377"]
    ing0_Distilled_water -.-> CHEBI_15377
    ing1_Resazurin["Resazurin"]
    CultureMech_009545 --> ing1_Resazurin
    CHEBI_8806["CHEBI:8806"]
    ing1_Resazurin -.-> CHEBI_8806
    ing2_NaHCO3["NaHCO3"]
    CultureMech_009545 --> ing2_NaHCO3
    CHEBI_32139["CHEBI:32139"]
    ing2_NaHCO3 -.-> CHEBI_32139
    ing3_Cellobiose["Cellobiose"]
    CultureMech_009545 --> ing3_Cellobiose
    CHEBI_17057["CHEBI:17057"]
    ing3_Cellobiose -.-> CHEBI_17057
    ing4_Maltose["Maltose"]
    CultureMech_009545 --> ing4_Maltose
    CHEBI_18167["CHEBI:18167"]
    ing4_Maltose -.-> CHEBI_18167
    ing5_Glucose["Glucose"]
    CultureMech_009545 --> ing5_Glucose
    CHEBI_17234["CHEBI:17234"]
    ing5_Glucose -.-> CHEBI_17234
    ing6_Yeast_extract__BD__Difco_["Yeast extract (BD--Difco)"]
    CultureMech_009545 --> ing6_Yeast_extract__BD__Difco_
    ing7_Tryptone__BD__Difco_["Tryptone (BD--Difco)"]
    CultureMech_009545 --> ing7_Tryptone__BD__Difco_
    ing8_L_Cysteine_HCl_H2O["L-Cysteine·HCl·H2O"]
    CultureMech_009545 --> ing8_L_Cysteine_HCl_H2O
    ing9_K2HPO4["K2HPO4"]
    CultureMech_009545 --> ing9_K2HPO4
    CHEBI_131527["CHEBI:131527"]
    ing9_K2HPO4 -.-> CHEBI_131527
    ing10_MgSO4_7H2O["MgSO4·7H2O"]
    CultureMech_009545 --> ing10_MgSO4_7H2O
    CHEBI_31795["CHEBI:31795"]
    ing10_MgSO4_7H2O -.-> CHEBI_31795
    ing11_NaCl["NaCl"]
    CultureMech_009545 --> ing11_NaCl
    CHEBI_26710["CHEBI:26710"]
    ing11_NaCl -.-> CHEBI_26710
    ing12_CaCl2_2H2O["CaCl2·2H2O"]
    CultureMech_009545 --> ing12_CaCl2_2H2O
    CHEBI_86158["CHEBI:86158"]
    ing12_CaCl2_2H2O -.-> CHEBI_86158
    ing13_KH2PO4["KH2PO4"]
    CultureMech_009545 --> ing13_KH2PO4
    CHEBI_63036["CHEBI:63036"]
    ing13_KH2PO4 -.-> CHEBI_63036
    ing14__NH4_2SO4["(NH4)2SO4"]
    CultureMech_009545 --> ing14__NH4_2SO4
    CHEBI_62946["CHEBI:62946"]
    ing14__NH4_2SO4 -.-> CHEBI_62946
    ing15_10_N_NaOH["10 N NaOH"]
    CultureMech_009545 --> ing15_10_N_NaOH
    ing16_Acetic_acid["Acetic acid"]
    CultureMech_009545 --> ing16_Acetic_acid
    CHEBI_15366["CHEBI:15366"]
    ing16_Acetic_acid -.-> CHEBI_15366
    ing17_n__Valeric_acid["n--Valeric acid"]
    CultureMech_009545 --> ing17_n__Valeric_acid
    ing18_iso__Valeric_acid["iso--Valeric acid"]
    CultureMech_009545 --> ing18_iso__Valeric_acid
    ing19_iso__Butyric_acid["iso--Butyric acid"]
    CultureMech_009545 --> ing19_iso__Butyric_acid
    ing20_Propionic_acid["Propionic acid"]
    CultureMech_009545 --> ing20_Propionic_acid
    CHEBI_30768["CHEBI:30768"]
    ing20_Propionic_acid -.-> CHEBI_30768
    ing21_Ethanol["Ethanol"]
    CultureMech_009545 --> ing21_Ethanol
    CHEBI_16236["CHEBI:16236"]
    ing21_Ethanol -.-> CHEBI_16236
    ing22_Hemin["Hemin"]
    CultureMech_009545 --> ing22_Hemin
    CHEBI_50385["CHEBI:50385"]
    ing22_Hemin -.-> CHEBI_50385
    ing23_KOH["KOH"]
    CultureMech_009545 --> ing23_KOH
    CHEBI_32035["CHEBI:32035"]
    ing23_KOH -.-> CHEBI_32035
    ing24_Biotin["Biotin"]
    CultureMech_009545 --> ing24_Biotin
    CHEBI_15956["CHEBI:15956"]
    ing24_Biotin -.-> CHEBI_15956
    ing25_p__Aminobenzoic_acid["p--Aminobenzoic acid"]
    CultureMech_009545 --> ing25_p__Aminobenzoic_acid
    CHEBI_30753["CHEBI:30753"]
    ing25_p__Aminobenzoic_acid -.-> CHEBI_30753
    ing26_Pyridoxine_HCl["Pyridoxine・HCl"]
    CultureMech_009545 --> ing26_Pyridoxine_HCl
    CHEBI_30961["CHEBI:30961"]
    ing26_Pyridoxine_HCl -.-> CHEBI_30961
    ing27_Folic_acid["Folic acid"]
    CultureMech_009545 --> ing27_Folic_acid
    CHEBI_27470["CHEBI:27470"]
    ing27_Folic_acid -.-> CHEBI_27470
    ing28_Vitamin_B12["Vitamin B12"]
    CultureMech_009545 --> ing28_Vitamin_B12
    CHEBI_176843["CHEBI:176843"]
    ing28_Vitamin_B12 -.-> CHEBI_176843
    ing29_Thiamine_HCl["Thiamine・HCl"]
    CultureMech_009545 --> ing29_Thiamine_HCl
    CHEBI_49105["CHEBI:49105"]
    ing29_Thiamine_HCl -.-> CHEBI_49105
    CultureMech_009545 --> more["...1 more"]

Ingredients (31)

#	Ingredient	Concentration	Ontology	Notes
1	Distilled water H2O 18.015 g/mol	1762.0 G_PER_L	CHEBI:15377 water	Role: Solvating media; Properties: Inorganic compound, Defined component, Simple component [Merged 6 duplicates: 660.0, 1.0, 1.0, 100.0, 500.0, 500.0]
2	Resazurin C12H7NO4 229.191 g/mol	1 G_PER_L	CHEBI:8806 Resazurin	Role: pH dependent redox indicator; Properties: Organic compound, Defined component, Simple component
3	NaHCO3 CHO3.Na 84.006 g/mol	4 G_PER_L	CHEBI:32139 sodium hydrogencarbonate	Role: Buffer; Properties: Inorganic compound, Defined component, Simple component
4	Cellobiose C12H22O11 342.297 g/mol	2 G_PER_L	CHEBI:17057 cellobiose	Role: Carbon source; Properties: Organic compound, Defined component, Simple component
5	Maltose C12H22O11 342.297 g/mol	2 G_PER_L	CHEBI:18167 alpha-maltose	Role: Carbon source; Properties: Organic compound, Defined component, Simple component
6	Glucose C6H12O6 180.156 g/mol	2 G_PER_L	CHEBI:17234 glucose	Role: Carbon source; Properties: Organic compound, Defined component, Simple component
7	Yeast extract (BD--Difco)	2.5 G_PER_L		Properties: Undefined component
8	Tryptone (BD--Difco)	10 G_PER_L		Properties: Undefined component
9	L-Cysteine·HCl·H2O	1 G_PER_L		Properties: Defined component, Simple component, Organic compound
10	K2HPO4 HO4P.2K 174.174 g/mol	3 G_PER_L	CHEBI:131527 dipotassium hydrogen phosphate	Role: Buffer; Properties: Inorganic compound, Defined component, Simple component
11	MgSO4·7H2O 7H2O.Mg.O4S 246.473 g/mol	0.6 G_PER_L	CHEBI:31795 magnesium sulfate heptahydrate	Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component
12	NaCl Cl.Na 58.443 g/mol	6 G_PER_L	CHEBI:26710 sodium chloride	Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component
13	CaCl2·2H2O Ca.2Cl.2H2O 147.014 g/mol	0.6 G_PER_L	CHEBI:86158 calcium chloride dihydrate	Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component
14	KH2PO4 H2O4P.K 136.084 g/mol	3 G_PER_L	CHEBI:63036 potassium dihydrogen phosphate	Role: Buffer; Properties: Inorganic compound, Defined component, Simple component
15	(NH4)2SO4 2H4N.O4S 132.141 g/mol	6 G_PER_L	CHEBI:62946 ammonium sulfate	Role: Nitrogen source; Properties: Inorganic compound, Defined component, Simple component
16	10 N NaOH	26 G_PER_L		Properties: Defined component, Inorganic compound, Solution
17	Acetic acid C2H4O2 60.052 g/mol	17 G_PER_L	CHEBI:15366 acetic acid	Role: Carbon source; Properties: Organic compound, Defined component, Simple component
18	n--Valeric acid	1 G_PER_L		Role: Carbon source; Properties: Organic compound, Defined component, Simple component
19	iso--Valeric acid	1 G_PER_L		Role: Carbon source; Properties: Organic compound, Defined component, Simple component
20	iso--Butyric acid	1 G_PER_L		Role: Carbon source; Properties: Organic compound, Defined component, Simple component
21	Propionic acid C3H6O2 74.079 g/mol	6 G_PER_L	CHEBI:30768 propionic acid	Role: Carbon source; Properties: Organic compound, Defined component, Simple component
22	Ethanol C2H6O 46.069 g/mol	25 G_PER_L	CHEBI:16236 ethanol	Role: Solvating media; Properties: Organic compound, Defined component, Simple component
23	Hemin C34H32ClFeN4O4 651.952 g/mol	0.1 G_PER_L	CHEBI:50385 hemin	Role: Growth factor; Properties: Organic compound, Defined component, Simple component
24	KOH HO.K 56.105 g/mol	0.28 G_PER_L	CHEBI:32035 potassium hydroxide	Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component
25	Biotin C10H16N2O3S 244.316 g/mol	5 G_PER_L	CHEBI:15956 biotin	Role: Vitamin; Properties: Organic compound, Defined component, Simple component
26	p--Aminobenzoic acid C7H7NO2 137.138 g/mol	15 G_PER_L	CHEBI:30753 4-aminobenzoic acid	Role: Vitamin; Properties: Organic compound, Defined component, Simple component
27	Pyridoxine・HCl C8H11NO3.HCl 205.641 g/mol	75 G_PER_L	CHEBI:30961 pyridoxine hydrochloride	Role: Vitamin; Properties: Organic compound, Defined component, Simple component
28	Folic acid C19H19N7O6 441.404 g/mol	25 G_PER_L	CHEBI:27470 folic acid	Role: Vitamin; Properties: Organic compound, Defined component, Simple component
29	Vitamin B12	5 G_PER_L	CHEBI:176843 vitamin B12	Role: Vitamin; Properties: Organic compound, Defined component, Simple component
30	Thiamine・HCl C12H17N4OS.Cl.HCl 337.276 g/mol	25 G_PER_L	CHEBI:49105 thiamine hydrochloride	Role: Vitamin; Properties: Organic compound, Defined component, Simple component
31	Riboflavin C17H20N4O6 376.369 g/mol	25 G_PER_L	CHEBI:17015 riboflavin	Role: Vitamin; Properties: Organic compound, Defined component, Simple component