Overview
- External ontology
- TOGO:M3051 — Medium for nitrite oxidizer
- Applications
-
- Microbial cultivation
- High-metal flag
- True
- Notes
- Source: https://togomedium.org/medium/M3051 Original source: NBRC - NBRC_M1601 Original URL: https://www.nite.go.jp/nbrc/catalogue/NBRCMediumDetailServlet?NO=1601
Composition
flowchart LR
CultureMech_009565["medium_for_nitrite_oxidizer"]
ing0_Distilled_water["Distilled water"]
CultureMech_009565 --> ing0_Distilled_water
CHEBI_15377["CHEBI:15377"]
ing0_Distilled_water -.-> CHEBI_15377
ing1_MgSO4_7H2O["MgSO4·7H2O"]
CultureMech_009565 --> ing1_MgSO4_7H2O
CHEBI_31795["CHEBI:31795"]
ing1_MgSO4_7H2O -.-> CHEBI_31795
ing2_CaCl2_2H2O["CaCl2·2H2O"]
CultureMech_009565 --> ing2_CaCl2_2H2O
CHEBI_86158["CHEBI:86158"]
ing2_CaCl2_2H2O -.-> CHEBI_86158
ing3_K2HPO4["K2HPO4"]
CultureMech_009565 --> ing3_K2HPO4
CHEBI_131527["CHEBI:131527"]
ing3_K2HPO4 -.-> CHEBI_131527
ing4_H3BO3["H3BO3"]
CultureMech_009565 --> ing4_H3BO3
CHEBI_33118["CHEBI:33118"]
ing4_H3BO3 -.-> CHEBI_33118
ing5_FeSO4_7H2O["FeSO4·7H2O"]
CultureMech_009565 --> ing5_FeSO4_7H2O
CHEBI_75836["CHEBI:75836"]
ing5_FeSO4_7H2O -.-> CHEBI_75836
ing6_NaHCO3["NaHCO3"]
CultureMech_009565 --> ing6_NaHCO3
CHEBI_32139["CHEBI:32139"]
ing6_NaHCO3 -.-> CHEBI_32139
ing7_ZnSO4_7H2O["ZnSO4·7H2O"]
CultureMech_009565 --> ing7_ZnSO4_7H2O
CHEBI_32312["CHEBI:32312"]
ing7_ZnSO4_7H2O -.-> CHEBI_32312
ing8_CuSO4_5H2O["CuSO4·5H2O"]
CultureMech_009565 --> ing8_CuSO4_5H2O
CHEBI_31440["CHEBI:31440"]
ing8_CuSO4_5H2O -.-> CHEBI_31440
ing9_MnSO4_5H2O["MnSO4·5H2O"]
CultureMech_009565 --> ing9_MnSO4_5H2O
CHEBI_131524["CHEBI:131524"]
ing9_MnSO4_5H2O -.-> CHEBI_131524
ing10_NaNO2["NaNO2"]
CultureMech_009565 --> ing10_NaNO2
CHEBI_78870["CHEBI:78870"]
ing10_NaNO2 -.-> CHEBI_78870
ing11_Na2Mo4O4["Na2Mo4O4"]
CultureMech_009565 --> ing11_Na2Mo4O4
Ingredients (12)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Distilled water
H2O 18.015 g/mol
|
1 G_PER_L |
CHEBI:15377
water
|
Role: Solvating media; Properties: Defined component, Inorganic compound, Simple component |
| 2 |
MgSO4·7H2O
7H2O.Mg.O4S 246.473 g/mol
|
40.6 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
Role: Mineral source; Properties: Inorganic compound, Simple component, Defined component |
| 3 |
CaCl2·2H2O
Ca.2Cl.2H2O 147.014 g/mol
|
6.6 G_PER_L |
CHEBI:86158
calcium chloride dihydrate
|
Role: Mineral source; Properties: Simple component, Defined component, Inorganic compound |
| 4 |
K2HPO4
HO4P.2K 174.174 g/mol
|
25.4 G_PER_L |
CHEBI:131527
dipotassium hydrogen phosphate
|
Role: Buffer; Properties: Defined component, Inorganic compound, Simple component |
| 5 |
H3BO3
H3BO3 61.833 g/mol
|
49.4 G_PER_L |
CHEBI:33118
boric acid
|
Role: Mineral source; Properties: Simple component, Defined component, Inorganic compound |
| 6 |
FeSO4·7H2O
Fe.7H2O.O4S 278.013 g/mol
|
3.2 G_PER_L |
CHEBI:75836
iron(2+) sulfate heptahydrate
|
Role: Mineral source; Properties: Defined component, Simple component, Inorganic compound |
| 7 |
NaHCO3
CHO3.Na 84.006 g/mol
|
200 G_PER_L |
CHEBI:32139
sodium hydrogencarbonate
|
Role: Buffer; Properties: Defined component, Inorganic compound, Simple component |
| 8 |
ZnSO4·7H2O
7H2O.O4S.Zn 287.558 g/mol
|
43.1 G_PER_L |
CHEBI:32312
zinc sulfate heptahydrate
|
Role: Mineral source; Properties: Defined component, Inorganic compound, Simple component |
| 9 |
CuSO4·5H2O
Cu.5H2O.O4S 249.684 g/mol
|
25 G_PER_L |
CHEBI:31440
copper(II) sulfate pentahydrate
|
Role: Mineral source; Properties: Inorganic compound, Simple component, Defined component |
| 10 |
MnSO4·5H2O
5H2O.Mn.O4S 241.076 g/mol
|
54.2 G_PER_L |
CHEBI:131524
manganese(II) sulfate pentahydrate
|
Role: Mineral source; Properties: Defined component, Inorganic compound, Simple component |
| 11 |
NaNO2
NO2.Na 68.995 g/mol
|
49.2 G_PER_L |
CHEBI:78870
sodium nitrite
|
Role: Nitrogen source; Properties: Defined component, Inorganic compound, Simple component |
| 12 | Na2Mo4O4 | 27.6 G_PER_L | Role: Mineral source; Properties: Organic compound, Simple component, Defined component |
Target organisms
No target organisms are recorded.
Provenance
Merged from 1 source record.
- medium_for_nitrite_oxidizer (CultureMech:009565)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T06:35:59.239998Z | togo-import | Imported from TOGO Medium | Source: NBRC, ID: M3051 |
| 2026-01-28T19:48:33.327528Z | chebi-enrichment | Added CHEBI ontology terms to ingredients | Enriched using MicrobeMediaParam and MediaDive chemical mappings |
| 2026-03-13T06:20:06.940381Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:009565 |
| 2026-03-17T06:30:35.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:25.964554+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "Medium for nitrite oxidizer" to "medium_for_nitrite_oxidizer" for consistent matching |
| 2026-06-05T07:41:29.258172+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 10 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T06:58:21.133684+00:00 | mgso4-heptahydrate-term-fix-v1.0 | Corrected MgSO4·7H2O primary term grounding to heptahydrate | Re-grounded 1 heptahydrate-labelled ingredient(s) from CHEBI:32599 (generic magnesium sulfate) to CHEBI:31795 (magnesium sulfate heptahydrate). Generic/hexahydrate labels untouched. |
| 2026-06-10T07:47:06.117412+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 2 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-08-06T03:05:43.233148+00:00 | merge_recipes.py | MERGED_RECIPES | merged 1 source recipe(s) on fingerprint b2f694c1a7a49bb1ecd9b0ea9f9b336f3c00dd61b648877d3bb6803811f119c0 |