modified_9k_medium

CultureMech:009678 bacterial COMPLEX LIQUID
Original name: Modified 9K medium

Overview

External ontology
TOGO:M3240 — Modified 9K medium
Applications
  • Microbial cultivation
High-metal flag
True
Notes
Source: https://togomedium.org/medium/M3240

Composition

flowchart LR
    CultureMech_009678["modified_9k_medium"]
    ing0_Distilled_water["Distilled water"]
    CultureMech_009678 --> ing0_Distilled_water
    CHEBI_15377["CHEBI:15377"]
    ing0_Distilled_water -.-> CHEBI_15377
    ing1_MgSO4_7H2O["MgSO4·7H2O"]
    CultureMech_009678 --> ing1_MgSO4_7H2O
    CHEBI_31795["CHEBI:31795"]
    ing1_MgSO4_7H2O -.-> CHEBI_31795
    ing2_KH2PO4["KH2PO4"]
    CultureMech_009678 --> ing2_KH2PO4
    CHEBI_63036["CHEBI:63036"]
    ing2_KH2PO4 -.-> CHEBI_63036
    ing3__NH4_2SO4["(NH4)2SO4"]
    CultureMech_009678 --> ing3__NH4_2SO4
    CHEBI_62946["CHEBI:62946"]
    ing3__NH4_2SO4 -.-> CHEBI_62946
    ing4_Fe2_SO4_3["Fe2(SO4)3"]
    CultureMech_009678 --> ing4_Fe2_SO4_3
    ing5_Concentrated_H2SO4["Concentrated H2SO4"]
    CultureMech_009678 --> ing5_Concentrated_H2SO4
    ing6_N2_gas["N2 gas"]
    CultureMech_009678 --> ing6_N2_gas
    ing7_Hydrogen_gas["Hydrogen gas"]
    CultureMech_009678 --> ing7_Hydrogen_gas
    CHEBI_18276["CHEBI:18276"]
    ing7_Hydrogen_gas -.-> CHEBI_18276
    ing8_H3BO3["H3BO3"]
    CultureMech_009678 --> ing8_H3BO3
    CHEBI_33118["CHEBI:33118"]
    ing8_H3BO3 -.-> CHEBI_33118
    ing9_ZnSO4_7H2O["ZnSO4·7H2O"]
    CultureMech_009678 --> ing9_ZnSO4_7H2O
    CHEBI_32312["CHEBI:32312"]
    ing9_ZnSO4_7H2O -.-> CHEBI_32312
    ing10_CuCl2_2H2O["CuCl2·2H2O"]
    CultureMech_009678 --> ing10_CuCl2_2H2O
    CHEBI_86318["CHEBI:86318"]
    ing10_CuCl2_2H2O -.-> CHEBI_86318
    ing11_MnCl2_2H2O["MnCl2·2H2O"]
    CultureMech_009678 --> ing11_MnCl2_2H2O
    CHEBI_131395["CHEBI:131395"]
    ing11_MnCl2_2H2O -.-> CHEBI_131395
    ing12_Na2MoO4["Na2MoO4"]
    CultureMech_009678 --> ing12_Na2MoO4
    CHEBI_75215["CHEBI:75215"]
    ing12_Na2MoO4 -.-> CHEBI_75215
    ing13_NaVO3["NaVO3"]
    CultureMech_009678 --> ing13_NaVO3
    CHEBI_75221["CHEBI:75221"]
    ing13_NaVO3 -.-> CHEBI_75221

Ingredients (14)

# Ingredient Concentration Ontology Notes
1 Distilled water
H2O 18.015 g/mol
2.0 G_PER_L CHEBI:15377
water
Role: Solvating media; Properties: Defined component, Inorganic compound, Simple component [Merged 2 duplicates: 1.0, 1.0]
2 MgSO4·7H2O
7H2O.Mg.O4S 246.473 g/mol
0.4 G_PER_L CHEBI:31795
magnesium sulfate heptahydrate
Role: Mineral source; Properties: Defined component, Simple component, Inorganic compound
3 KH2PO4
H2O4P.K 136.084 g/mol
0.4 G_PER_L CHEBI:63036
potassium dihydrogen phosphate
Role: Buffer; Properties: Simple component, Inorganic compound, Defined component
4 (NH4)2SO4
2H4N.O4S 132.141 g/mol
0.4 G_PER_L CHEBI:62946
ammonium sulfate
Role: Nitrogen source; Properties: Defined component, Inorganic compound, Simple component
5 Fe2(SO4)3 2.5 G_PER_L Role: Mineral source; Properties: Defined component, Inorganic compound, Simple component
6 Concentrated H2SO4 variable VARIABLE Role: Mineral source; Properties: Defined component, Inorganic compound, Solution
7 N2 gas variable VARIABLE Properties: ガス
8 Hydrogen gas
H2 2.016 g/mol
variable VARIABLE CHEBI:18276
dihydrogen
Properties: ガス
9 H3BO3
H3BO3 61.833 g/mol
30 G_PER_L CHEBI:33118
boric acid
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component
10 ZnSO4·7H2O
7H2O.O4S.Zn 287.558 g/mol
68 G_PER_L CHEBI:32312
zinc sulfate heptahydrate
Role: Mineral source; Properties: Simple component, Defined component, Inorganic compound
11 CuCl2·2H2O
Cl2Cu.2H2O 170.482 g/mol
66 G_PER_L CHEBI:86318
copper(II) chloride dihydrate
Role: Mineral source; Properties: Defined component, Inorganic compound, Simple component
12 MnCl2·2H2O
Cl2Mn.2H2O 161.874 g/mol
62 G_PER_L CHEBI:131395
manganese(II) chloride dihydrate
Role: Mineral source; Properties: Inorganic compound, Simple component, Defined component
13 Na2MoO4
MoO4.2Na 205.916 g/mol
10 G_PER_L CHEBI:75215
sodium molybdate (anhydrous)
Role: Mineral source; Properties: Simple component, Defined component, Organic compound
14 NaVO3
Na.O3V 121.931 g/mol
30 G_PER_L CHEBI:75221
sodium metavanadate
Role: Mineral source; Properties: Defined component, Simple component, Inorganic compound

Solutions

Trace element solution

Dose: 1 G_PER_L

See mediadive_6187_Trace_element_solution.yaml for composition

Target organisms

No target organisms are recorded.

Provenance

Merged from 1 source record.

TimestampCuratorActionNotes
2026-01-27T06:35:57.630688Z togo-import Imported from TOGO Medium Source: TOGO, ID: M3240
2026-01-28T19:48:16.826899Z chebi-enrichment Added CHEBI ontology terms to ingredients Enriched using MicrobeMediaParam and MediaDive chemical mappings
2026-02-03T00:00:00+00:00 schema-defaulter-v1.0 Applied schema defaults and normalizations Added default concentration for ingredient: Concentrated H2SO4; Added default concentration for ingredient: N2 gas; Added default concentration for ingredient: Hydrogen gas
2026-03-09T08:04:27.796658+00:00 solution-migrator-v1.0 Migrated solutions from ingredients to solutions array Moved 1 solution(s) from ingredients
2026-03-13T03:08:56.552209Z data-quality-cleanup-v1.0 Data quality fixes Merged 1 duplicate ingredient(s)
2026-03-13T06:20:08.049745Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:009678
2026-03-14T00:00:00+00:00 schema-defaulter-v1.0 Applied schema defaults and normalizations Added default solution name
2026-03-17T06:30:01.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:46:27.054621+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "Modified 9K medium" to "modified_9k_medium" for consistent matching
2026-05-16T09:04:24.968836+00:00 migrate_legacy_fields.py MIGRATED_LEGACY_FIELDS curation_history.date->timestamp=2
2026-06-05T07:41:36.084565+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 9 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T06:58:25.624509+00:00 mgso4-heptahydrate-term-fix-v1.0 Corrected MgSO4·7H2O primary term grounding to heptahydrate Re-grounded 1 heptahydrate-labelled ingredient(s) from CHEBI:32599 (generic magnesium sulfate) to CHEBI:31795 (magnesium sulfate heptahydrate). Generic/hexahydrate labels untouched.
2026-06-10T07:47:08.481823+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 3 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.
2026-08-06T03:05:47.872253+00:00 merge_recipes.py MERGED_RECIPES merged 1 source recipe(s) on fingerprint 7d68362a8aa2a71c38f31cfd4b02a4573f7923cfcedef8ef01e3a060cff814f6