Overview
- External ontology
- TOGO:M490 — Catonella Ureilytica Medium
- Applications
-
- Microbial cultivation
- Notes
- Source: https://togomedium.org/medium/M490 Original source: JCM - JCM_M489 Original URL: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=489
Composition
flowchart LR
CultureMech_009878["catonella_ureilytica_medium"]
ing0_Distilled_water["Distilled water"]
CultureMech_009878 --> ing0_Distilled_water
CHEBI_15377["CHEBI:15377"]
ing0_Distilled_water -.-> CHEBI_15377
ing1_Yeast_extract["Yeast extract"]
CultureMech_009878 --> ing1_Yeast_extract
ing2_Resazurin["Resazurin"]
CultureMech_009878 --> ing2_Resazurin
CHEBI_8806["CHEBI:8806"]
ing2_Resazurin -.-> CHEBI_8806
ing3_MgCl2_6H2O["MgCl2・6H2O"]
CultureMech_009878 --> ing3_MgCl2_6H2O
CHEBI_86345["CHEBI:86345"]
ing3_MgCl2_6H2O -.-> CHEBI_86345
ing4_Na2HPO4["Na2HPO4"]
CultureMech_009878 --> ing4_Na2HPO4
CHEBI_34683["CHEBI:34683"]
ing4_Na2HPO4 -.-> CHEBI_34683
ing5_Casitone__BD_Difco_["Casitone (BD-Difco)"]
CultureMech_009878 --> ing5_Casitone__BD_Difco_
ing6_Sodium_thioglycolate["Sodium thioglycolate"]
CultureMech_009878 --> ing6_Sodium_thioglycolate
CHEBI_86481["CHEBI:86481"]
ing6_Sodium_thioglycolate -.-> CHEBI_86481
ing7_Urea["Urea"]
CultureMech_009878 --> ing7_Urea
CHEBI_16199["CHEBI:16199"]
ing7_Urea -.-> CHEBI_16199
ing8_Carbon_dioxide_gas["Carbon dioxide gas"]
CultureMech_009878 --> ing8_Carbon_dioxide_gas
CHEBI_16526["CHEBI:16526"]
ing8_Carbon_dioxide_gas -.-> CHEBI_16526
ing9_Nitrogen_gas["Nitrogen gas"]
CultureMech_009878 --> ing9_Nitrogen_gas
CHEBI_17997["CHEBI:17997"]
ing9_Nitrogen_gas -.-> CHEBI_17997
Ingredients (10)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Distilled water
H2O 18.015 g/mol
|
1 G_PER_L |
CHEBI:15377
water
|
Role: Solvating media; Properties: Inorganic compound, Simple component, Defined component |
| 2 | Yeast extract | 5 G_PER_L | Role: Nutrient source; Properties: Undefined component | |
| 3 |
Resazurin
C12H7NO4 229.191 g/mol
|
0.5 G_PER_L |
CHEBI:8806
Resazurin
|
Role: pH dependent redox indicator; Properties: Defined component, Simple component, Organic compound |
| 4 |
MgCl2・6H2O
2Cl.6H2O.Mg 203.301 g/mol
|
1.1 G_PER_L |
CHEBI:86345
magnesium dichloride hexahydrate
|
Role: Mineral source; Properties: Defined component, Inorganic compound, Simple component |
| 5 |
Na2HPO4
HO4P.2Na 141.958 g/mol
|
5 G_PER_L |
CHEBI:34683
disodium hydrogenphosphate
|
Role: Buffer; Properties: Defined component, Inorganic compound, Simple component |
| 6 | Casitone (BD-Difco) | 20 G_PER_L | Properties: Undefined component | |
| 7 |
Sodium thioglycolate
C2H3O2S.Na 114.101 g/mol
|
0.75 G_PER_L |
CHEBI:86481
sodium thioglycolate
|
Properties: Simple component, Defined component, Organic compound |
| 8 |
Urea
CH4N2O 60.056 g/mol
|
1 G_PER_L |
CHEBI:16199
urea
|
Properties: Defined component, Simple component, Organic compound |
| 9 |
Carbon dioxide gas
CO2 44.009 g/mol
|
variable VARIABLE |
CHEBI:16526
carbon dioxide
|
Properties: ガス |
| 10 |
Nitrogen gas
N2 28.014 g/mol
|
variable VARIABLE |
CHEBI:17997
dinitrogen
|
Properties: ガス |
Target organisms
No target organisms are recorded.
Provenance
Merged from 1 source record.
- TOGO_M490_Catonella_Ureilytica_Medium (CultureMech:009878)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T06:35:55.152338Z | togo-import | Imported from TOGO Medium | Source: JCM, ID: M490 |
| 2026-01-28T19:48:08.815987Z | chebi-enrichment | Added CHEBI ontology terms to ingredients | Enriched using MicrobeMediaParam and MediaDive chemical mappings |
| 2026-02-03T00:00:00+00:00 | schema-defaulter-v1.0 | Applied schema defaults and normalizations | Added default concentration for ingredient: Carbon dioxide gas; Added default concentration for ingredient: Nitrogen gas |
| 2026-03-13T06:20:09.586891Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:009878 |
| 2026-03-17T06:29:43.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:28.551405+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "Catonella Ureilytica Medium" to "catonella_ureilytica_medium" for consistent matching |
| 2026-05-16T09:03:18.423461+00:00 | migrate_legacy_fields.py | MIGRATED_LEGACY_FIELDS | curation_history.date->timestamp=1 |
| 2026-06-05T07:40:41.844862+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 5 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-08-06T03:05:16.571866+00:00 | merge_recipes.py | MERGED_RECIPES | merged 1 source recipe(s) on fingerprint c7a2eae23f08d6307ca7602e6949a30e9d7d175f549d6f42daba71f0890ca276 |