Overview
- External ontology
- TOGO:M526 — Acidianus SP. JP7 Medium
- Applications
-
- Microbial cultivation
- Notes
- Source: https://togomedium.org/medium/M526 Original source: JCM - JCM_M525 Original URL: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=525
Composition
flowchart LR
CultureMech_009918["acidianus_sp_jp7_medium"]
ing0_Sol__1["Sol. 1"]
CultureMech_009918 --> ing0_Sol__1
ing1_Sol__2["Sol. 2"]
CultureMech_009918 --> ing1_Sol__2
ing2_Distilled_water["Distilled water"]
CultureMech_009918 --> ing2_Distilled_water
CHEBI_15377["CHEBI:15377"]
ing2_Distilled_water -.-> CHEBI_15377
ing3_MgSO4_7H2O["MgSO4・7H2O"]
CultureMech_009918 --> ing3_MgSO4_7H2O
CHEBI_31795["CHEBI:31795"]
ing3_MgSO4_7H2O -.-> CHEBI_31795
ing4_KH2PO4["KH2PO4"]
CultureMech_009918 --> ing4_KH2PO4
CHEBI_63036["CHEBI:63036"]
ing4_KH2PO4 -.-> CHEBI_63036
ing5_Na2MoO4_2H2O["Na2MoO4・2H2O"]
CultureMech_009918 --> ing5_Na2MoO4_2H2O
CHEBI_75213["CHEBI:75213"]
ing5_Na2MoO4_2H2O -.-> CHEBI_75213
ing6_MnCl2_4H2O["MnCl2・4H2O"]
CultureMech_009918 --> ing6_MnCl2_4H2O
CHEBI_86368["CHEBI:86368"]
ing6_MnCl2_4H2O -.-> CHEBI_86368
ing7_ZnSO4_7H2O["ZnSO4・7H2O"]
CultureMech_009918 --> ing7_ZnSO4_7H2O
CHEBI_32312["CHEBI:32312"]
ing7_ZnSO4_7H2O -.-> CHEBI_32312
ing8_CuCl2_2H2O["CuCl2・2H2O"]
CultureMech_009918 --> ing8_CuCl2_2H2O
CHEBI_86318["CHEBI:86318"]
ing8_CuCl2_2H2O -.-> CHEBI_86318
ing9__NH4_2SO4["(NH4)2SO4"]
CultureMech_009918 --> ing9__NH4_2SO4
CHEBI_62946["CHEBI:62946"]
ing9__NH4_2SO4 -.-> CHEBI_62946
ing10_FeCl3_6H2O["FeCl3・6H2O"]
CultureMech_009918 --> ing10_FeCl3_6H2O
CHEBI_86254["CHEBI:86254"]
ing10_FeCl3_6H2O -.-> CHEBI_86254
ing11_CoSO4_7H2O["CoSO4・7H2O"]
CultureMech_009918 --> ing11_CoSO4_7H2O
CHEBI_91244["CHEBI:91244"]
ing11_CoSO4_7H2O -.-> CHEBI_91244
ing12_VOSO4_xH2O["VOSO4・xH2O"]
CultureMech_009918 --> ing12_VOSO4_xH2O
ing13_Na2B4O7_10H2O["Na2B4O7・10H2O"]
CultureMech_009918 --> ing13_Na2B4O7_10H2O
CHEBI_131366["CHEBI:131366"]
ing13_Na2B4O7_10H2O -.-> CHEBI_131366
ing14_Yeast_extract__BD_Difco_["Yeast extract (BD-Difco)"]
CultureMech_009918 --> ing14_Yeast_extract__BD_Difco_
ing15_H2SO4["H2SO4"]
CultureMech_009918 --> ing15_H2SO4
CHEBI_26836["CHEBI:26836"]
ing15_H2SO4 -.-> CHEBI_26836
ing16_Chalcopyrite["Chalcopyrite"]
CultureMech_009918 --> ing16_Chalcopyrite
CHEBI_86202["CHEBI:86202"]
ing16_Chalcopyrite -.-> CHEBI_86202
Ingredients (17)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 | Sol. 1 | 500 G_PER_L | ||
| 2 | Sol. 2 | 500 G_PER_L | ||
| 3 |
Distilled water
H2O 18.015 g/mol
|
1000.0 G_PER_L |
CHEBI:15377
water
|
Role: Solvating media; Properties: Inorganic compound, Defined component, Simple component [Merged 2 duplicates: 500.0, 500.0] |
| 4 |
MgSO4・7H2O
7H2O.Mg.O4S 246.473 g/mol
|
0.25 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component |
| 5 |
KH2PO4
H2O4P.K 136.084 g/mol
|
0.25 G_PER_L |
CHEBI:63036
potassium dihydrogen phosphate
|
Role: Buffer; Properties: Inorganic compound, Defined component, Simple component |
| 6 |
Na2MoO4・2H2O
2H2O.MoO4.2Na 241.946 g/mol
|
0.03 G_PER_L |
CHEBI:75213
sodium molybdate dihydrate
|
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component |
| 7 |
MnCl2・4H2O
Cl2Mn.4H2O 197.904 g/mol
|
1.8 G_PER_L |
CHEBI:86368
manganese(II) chloride tetrahydrate
|
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component |
| 8 |
ZnSO4・7H2O
7H2O.O4S.Zn 287.558 g/mol
|
0.22 G_PER_L |
CHEBI:32312
zinc sulfate heptahydrate
|
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component |
| 9 |
CuCl2・2H2O
Cl2Cu.2H2O 170.482 g/mol
|
0.05 G_PER_L |
CHEBI:86318
copper(II) chloride dihydrate
|
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component |
| 10 |
(NH4)2SO4
2H4N.O4S 132.141 g/mol
|
1.5 G_PER_L |
CHEBI:62946
ammonium sulfate
|
Role: Nitrogen source; Properties: Inorganic compound, Defined component, Simple component |
| 11 |
FeCl3・6H2O
Cl3Fe.6H2O 270.294 g/mol
|
0.02 G_PER_L |
CHEBI:86254
iron trichloride hexahydrate
|
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component |
| 12 |
CoSO4・7H2O
Co.7H2O.O4S 281.101 g/mol
|
0.01 G_PER_L |
CHEBI:91244
cobalt(2+) sulfate heptahydrate
|
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component |
| 13 | VOSO4・xH2O | 0.03 G_PER_L | Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component | |
| 14 |
Na2B4O7・10H2O
10H2O.H4B4O9.2Na 417.401 g/mol
|
4.5 G_PER_L |
CHEBI:131366
disodium tetraborate decahydrate
|
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component |
| 15 | Yeast extract (BD-Difco) | 0.1 G_PER_L | Properties: Undefined component | |
| 16 |
H2SO4
H2O4S 98.079 g/mol
|
variable VARIABLE |
CHEBI:26836
sulfuric acid
|
Role: Mineral source; Properties: Defined component, Inorganic compound, Solution |
| 17 |
Chalcopyrite
Cu.Fe.2S 183.525 g/mol
|
10 G_PER_L |
CHEBI:86202
chalcopyrite
|
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component |
Target organisms
No target organisms are recorded.
Provenance
Merged from 1 source record.
- TOGO_M526_Acidianus_SP._JP7_Medium (CultureMech:009918)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T06:35:55.235795Z | togo-import | Imported from TOGO Medium | Source: JCM, ID: M526 |
| 2026-01-28T19:48:42.825197Z | chebi-enrichment | Added CHEBI ontology terms to ingredients | Enriched using MicrobeMediaParam and MediaDive chemical mappings |
| 2026-02-03T00:00:00+00:00 | schema-defaulter-v1.0 | Applied schema defaults and normalizations | Added default concentration for ingredient: H2SO4 |
| 2026-03-13T03:09:44.020136Z | data-quality-cleanup-v1.0 | Data quality fixes | Merged 1 duplicate ingredient(s) |
| 2026-03-13T06:20:09.964562Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:009918 |
| 2026-03-17T06:30:56.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:28.906801+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "Acidianus SP. JP7 Medium" to "acidianus_sp_jp7_medium" for consistent matching |
| 2026-05-16T09:03:18.799431+00:00 | migrate_legacy_fields.py | MIGRATED_LEGACY_FIELDS | curation_history.date->timestamp=1 |
| 2026-06-05T07:40:42.227055+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 5 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T06:57:31.217091+00:00 | mgso4-heptahydrate-term-fix-v1.0 | Corrected MgSO4·7H2O primary term grounding to heptahydrate | Re-grounded 1 heptahydrate-labelled ingredient(s) from CHEBI:32599 (generic magnesium sulfate) to CHEBI:31795 (magnesium sulfate heptahydrate). Generic/hexahydrate labels untouched. |
| 2026-06-10T07:46:50.892086+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 2 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-08-06T03:04:27.580454+00:00 | merge_recipes.py | MERGED_RECIPES | merged 1 source recipe(s) on fingerprint aab6653f11ddfd830a110d9fed8035444468c8b03f1caafebf1f48c72bb9c74b |