Overview
- External ontology
- TOGO:M932 — RAE Medium
- Applications
-
- Microbial cultivation
- Notes
- Source: https://togomedium.org/medium/M932 Original source: JCM - JCM_M891 Original URL: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=891
Composition
flowchart LR
CultureMech_010354["rae_medium"]
ing0_Distilled_water["Distilled water"]
CultureMech_010354 --> ing0_Distilled_water
CHEBI_15377["CHEBI:15377"]
ing0_Distilled_water -.-> CHEBI_15377
ing1_Yeast_extract["Yeast extract"]
CultureMech_010354 --> ing1_Yeast_extract
ing2_Ethanol["Ethanol"]
CultureMech_010354 --> ing2_Ethanol
CHEBI_16236["CHEBI:16236"]
ing2_Ethanol -.-> CHEBI_16236
ing3_Na2HPO4_2H2O["Na2HPO4・2H2O"]
CultureMech_010354 --> ing3_Na2HPO4_2H2O
CHEBI_34683["CHEBI:34683"]
ing3_Na2HPO4_2H2O -.-> CHEBI_34683
ing4_Glucose["Glucose"]
CultureMech_010354 --> ing4_Glucose
CHEBI_17234["CHEBI:17234"]
ing4_Glucose -.-> CHEBI_17234
ing5_Agar["Agar"]
CultureMech_010354 --> ing5_Agar
CHEBI_2509["CHEBI:2509"]
ing5_Agar -.-> CHEBI_2509
ing6_Citric_acid["Citric acid"]
CultureMech_010354 --> ing6_Citric_acid
CHEBI_30769["CHEBI:30769"]
ing6_Citric_acid -.-> CHEBI_30769
ing7_Glacial_acetic_acid["Glacial acetic acid"]
CultureMech_010354 --> ing7_Glacial_acetic_acid
ing8_Peptone["Peptone"]
CultureMech_010354 --> ing8_Peptone
Ingredients (9)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Distilled water
H2O 18.015 g/mol
|
980 G_PER_L |
CHEBI:15377
water
|
Role: Solvating media; Properties: Defined component, Inorganic compound, Simple component |
| 2 | Yeast extract | 10 G_PER_L | Role: Nutrient source; Properties: Undefined component | |
| 3 |
Ethanol
C2H6O 46.069 g/mol
|
10 G_PER_L |
CHEBI:16236
ethanol
|
Role: Solvating media; Properties: Organic compound, Simple component, Defined component |
| 4 |
Na2HPO4・2H2O
HO4P.2Na 141.958 g/mol
|
3.38 G_PER_L |
CHEBI:34683
disodium hydrogenphosphate
|
Role: Buffer; Properties: Simple component, Inorganic compound, Defined component |
| 5 |
Glucose
C6H12O6 180.156 g/mol
|
40 G_PER_L |
CHEBI:17234
glucose
|
Role: Carbon source; Properties: Defined component, Organic compound, Simple component |
| 6 | Agar | 20 G_PER_L |
CHEBI:2509
agar
|
Role: Solidifying component |
| 7 |
Citric acid
C6H8O7 192.123 g/mol
|
1.5 G_PER_L |
CHEBI:30769
citric acid
|
Properties: Defined component, Organic compound, Simple component |
| 8 | Glacial acetic acid | 10 G_PER_L | Properties: Defined component, Simple component, Organic compound | |
| 9 | Peptone | 10 G_PER_L |
Target organisms
No target organisms are recorded.
Provenance
Merged from 1 source record.
- TOGO_M932_RAE_Medium (CultureMech:010354)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T06:35:55.984609Z | togo-import | Imported from TOGO Medium | Source: JCM, ID: M932 |
| 2026-01-28T19:48:25.831148Z | chebi-enrichment | Added CHEBI ontology terms to ingredients | Enriched using MicrobeMediaParam and MediaDive chemical mappings |
| 2026-03-13T06:20:13.218536Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:010354 |
| 2026-03-17T06:30:20.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:32.197895+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "RAE Medium" to "rae_medium" for consistent matching |
| 2026-06-05T07:40:45.801843+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 5 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-08-06T03:05:20.580589+00:00 | merge_recipes.py | MERGED_RECIPES | merged 1 source recipe(s) on fingerprint e87a11746310b74ec16661176c43e0113d16f34be1658344f671c883dcba7d9f |