sulfurimonas_hongkongensis_medium

CultureMech:010415 bacterial COMPLEX LIQUID
Original name: Sulfurimonas Hongkongensis Medium

Overview

External ontology
TOGO:M988 — Sulfurimonas Hongkongensis Medium
Applications
  • Microbial cultivation
Notes
Source: https://togomedium.org/medium/M988 Original source: JCM - JCM_M941 Original URL: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=941

Composition

flowchart LR
    CultureMech_010415["sulfurimonas_hongkongensis_medium"]
    ing0_N2["N2"]
    CultureMech_010415 --> ing0_N2
    CHEBI_17997["CHEBI:17997"]
    ing0_N2 -.-> CHEBI_17997
    ing1_Distilled_water["Distilled water"]
    CultureMech_010415 --> ing1_Distilled_water
    CHEBI_15377["CHEBI:15377"]
    ing1_Distilled_water -.-> CHEBI_15377
    ing2_NaCl["NaCl"]
    CultureMech_010415 --> ing2_NaCl
    CHEBI_26710["CHEBI:26710"]
    ing2_NaCl -.-> CHEBI_26710
    ing3_KH2PO4["KH2PO4"]
    CultureMech_010415 --> ing3_KH2PO4
    CHEBI_63036["CHEBI:63036"]
    ing3_KH2PO4 -.-> CHEBI_63036
    ing4_NH4Cl["NH4Cl"]
    CultureMech_010415 --> ing4_NH4Cl
    CHEBI_31206["CHEBI:31206"]
    ing4_NH4Cl -.-> CHEBI_31206
    ing5_KNO3["KNO3"]
    CultureMech_010415 --> ing5_KNO3
    CHEBI_63043["CHEBI:63043"]
    ing5_KNO3 -.-> CHEBI_63043
    ing6_NaOH["NaOH"]
    CultureMech_010415 --> ing6_NaOH
    CHEBI_32145["CHEBI:32145"]
    ing6_NaOH -.-> CHEBI_32145
    ing7_MgCl2_6H2O["MgCl2・6H2O"]
    CultureMech_010415 --> ing7_MgCl2_6H2O
    CHEBI_86345["CHEBI:86345"]
    ing7_MgCl2_6H2O -.-> CHEBI_86345
    ing8_Na2S2O4_2H2O["Na2S2O4・2H2O"]
    CultureMech_010415 --> ing8_Na2S2O4_2H2O
    ing9_NaHCO3["NaHCO3"]
    CultureMech_010415 --> ing9_NaHCO3
    CHEBI_32139["CHEBI:32139"]
    ing9_NaHCO3 -.-> CHEBI_32139
    ing10_FeSO4_7H2O["FeSO4・7H2O"]
    CultureMech_010415 --> ing10_FeSO4_7H2O
    CHEBI_75836["CHEBI:75836"]
    ing10_FeSO4_7H2O -.-> CHEBI_75836

Ingredients (11)

# Ingredient Concentration Ontology Notes
1 N2
N2 28.014 g/mol
variable VARIABLE CHEBI:17997
dinitrogen
 Properties: Gas
2 Distilled water
H2O 18.015 g/mol
1000.0 G_PER_L CHEBI:15377
water
 Role: Solvating media; Properties: Defined component, Simple component, Inorganic compound [Merged 4 duplicates: 930.0, 10.0, 40.0, 20.0]
3 NaCl
Cl.Na 58.443 g/mol
25 G_PER_L CHEBI:26710
sodium chloride
 Role: Mineral source; Properties: Inorganic compound, Simple component, Defined component
4 KH2PO4
H2O4P.K 136.084 g/mol
2 G_PER_L CHEBI:63036
potassium dihydrogen phosphate
 Role: Buffer; Properties: Simple component, Inorganic compound, Defined component
5 NH4Cl
Cl.H4N 53.492 g/mol
1 G_PER_L CHEBI:31206
ammonium chloride
 Role: Nitrogen source; Properties: Defined component, Simple component, Inorganic compound
6 KNO3
K.NO3 101.102 g/mol
2 G_PER_L CHEBI:63043
potassium nitrate
 Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component
7 NaOH
HO.Na 39.997 g/mol
variable VARIABLE CHEBI:32145
sodium hydroxide
 Properties: Defined component, Inorganic compound, Solution
8 MgCl2・6H2O
2Cl.6H2O.Mg 203.301 g/mol
0.8 G_PER_L CHEBI:86345
magnesium dichloride hexahydrate
 Role: Mineral source; Properties: Inorganic compound, Simple component, Defined component
9 Na2S2O4・2H2O 5 G_PER_L Properties: Defined component, Inorganic compound, Simple component
10 NaHCO3
CHO3.Na 84.006 g/mol
1 G_PER_L CHEBI:32139
sodium hydrogencarbonate
 Role: Buffer; Properties: Defined component, Inorganic compound, Simple component
11 FeSO4・7H2O
Fe.7H2O.O4S 278.013 g/mol
0.2 G_PER_L CHEBI:75836
iron(2+) sulfate heptahydrate
 Role: Mineral source; Properties: Defined component, Inorganic compound, Simple component

Solutions

Solution A

Dose: 932 G_PER_L

See mediadive_5342_Solution_A.yaml for composition

Solution B

Dose: 10 G_PER_L

See mediadive_5343_Solution_B.yaml for composition

Solution C

Dose: 40 G_PER_L

See mediadive_5312_Solution_C.yaml for composition

Solution D

Dose: 20 G_PER_L

See mediadive_5313_Solution_D.yaml for composition

Solution E

Dose: 1 G_PER_L

See mediadive_4959_Solution_E.yaml for composition

SL--4 trace element solution (see Medium [M335])

Dose: 2 G_PER_L

Cross-reference to Medium M335

0.1 N H2SO4 solution

Dose: 1 G_PER_L

Role: Mineral source; Properties: Defined component, Inorganic compound, Solution

Target organisms

No target organisms are recorded.

Provenance

Merged from 1 source record.

TimestampCuratorActionNotes
2026-01-27T06:35:56.091961Z togo-import Imported from TOGO Medium Source: JCM, ID: M988
2026-01-28T19:48:36.363790Z chebi-enrichment Added CHEBI ontology terms to ingredients Enriched using MicrobeMediaParam and MediaDive chemical mappings
2026-02-03T00:00:00+00:00 schema-defaulter-v1.0 Applied schema defaults and normalizations Added default concentration for ingredient: N2; Added default concentration for ingredient: NaOH; Added default concentration for ingredient: N2; Added default concentration for ingredient: N2; Added default concentration for ingredient: N2; Added default concentration for ingredient: N2
2026-03-09T08:05:00.631572+00:00 solution-migrator-v1.0 Migrated solutions from ingredients to solutions array Moved 7 solution(s) from ingredients
2026-03-13T03:09:32.459486Z data-quality-cleanup-v1.0 Data quality fixes Merged 7 duplicate ingredient(s)
2026-03-13T06:20:13.694982Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:010415
2026-03-14T00:00:00+00:00 schema-defaulter-v1.0 Applied schema defaults and normalizations Added default solution name; Added default solution name; Added default solution name; Added default solution name; Added default solution name; Added default solution name; Added default solution name
2026-03-17T06:30:42.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:46:32.671946+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "Sulfurimonas Hongkongensis Medium" to "sulfurimonas_hongkongensis_medium" for consistent matching
2026-05-16T09:03:22.570618+00:00 migrate_legacy_fields.py MIGRATED_LEGACY_FIELDS curation_history.date->timestamp=2
2026-06-05T07:40:46.304082+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 6 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:46:52.244464+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 2 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.
2026-08-06T03:05:21.031865+00:00 merge_recipes.py MERGED_RECIPES merged 1 source recipe(s) on fingerprint c34a692a0cfa580c3b5a3798d64426becd731be58986d8865115f6d860fbee3f