methanobrevibacter_cuticularis_medium

CultureMech:015861 archaea COMPLEX LIQUID
Original name: METHANOBREVIBACTER CUTICULARIS MEDIUM

Overview

External ontology
jcm.grmd:1424 (source link unavailable) — METHANOBREVIBACTER CUTICULARIS MEDIUM
Applications
  • Microbial cultivation
pH
7.7
Notes
Source: JCM | Link: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=1424

Composition

flowchart LR
    CultureMech_015861["methanobrevibacter_cuticularis_medium"]
    ing0_Rumen_fluid__clarified__see_Medium_No__266_["Rumen fluid, clarified (see Medium No. 266)"]
    CultureMech_015861 --> ing0_Rumen_fluid__clarified__see_Medium_No__266_
    ing1_NaCl["NaCl"]
    CultureMech_015861 --> ing1_NaCl
    CHEBI_26710["CHEBI:26710"]
    ing1_NaCl -.-> CHEBI_26710
    ing2_KCl["KCl"]
    CultureMech_015861 --> ing2_KCl
    CHEBI_32588["CHEBI:32588"]
    ing2_KCl -.-> CHEBI_32588
    ing3_MgCl2_6H2O["MgCl2·6H2O"]
    CultureMech_015861 --> ing3_MgCl2_6H2O
    CHEBI_86345["CHEBI:86345"]
    ing3_MgCl2_6H2O -.-> CHEBI_86345
    ing4_CaCl2_2H2O["CaCl2·2H2O"]
    CultureMech_015861 --> ing4_CaCl2_2H2O
    CHEBI_86158["CHEBI:86158"]
    ing4_CaCl2_2H2O -.-> CHEBI_86158
    ing5_NH4Cl["NH4Cl"]
    CultureMech_015861 --> ing5_NH4Cl
    CHEBI_31206["CHEBI:31206"]
    ing5_NH4Cl -.-> CHEBI_31206
    ing6_KH2PO4["KH2PO4"]
    CultureMech_015861 --> ing6_KH2PO4
    CHEBI_63036["CHEBI:63036"]
    ing6_KH2PO4 -.-> CHEBI_63036
    ing7_Na2SO4["Na2SO4"]
    CultureMech_015861 --> ing7_Na2SO4
    CHEBI_32149["CHEBI:32149"]
    ing7_Na2SO4 -.-> CHEBI_32149
    ing8_Casamino_acids__BD_Difco_["Casamino acids (BD Difco)"]
    CultureMech_015861 --> ing8_Casamino_acids__BD_Difco_
    ing9_Yeast_extract__Oxoid_["Yeast extract (Oxoid)"]
    CultureMech_015861 --> ing9_Yeast_extract__Oxoid_
    ing10_FeCl2_solution__see_Medium_No__187__["FeCl2 solution (see Medium No. 187 )"]
    CultureMech_015861 --> ing10_FeCl2_solution__see_Medium_No__187__
    ing11_Trace_element_solution__see_Medium_No__187__["Trace element solution (see Medium No. 187 )"]
    CultureMech_015861 --> ing11_Trace_element_solution__see_Medium_No__187__
    ing12_Selenite_tungstate_solution__see_Medium_No__431__["Selenite-tungstate solution (see Medium No. 431 )"]
    CultureMech_015861 --> ing12_Selenite_tungstate_solution__see_Medium_No__431__
    ing13_Resazurin["Resazurin"]
    CultureMech_015861 --> ing13_Resazurin
    CHEBI_8806["CHEBI:8806"]
    ing13_Resazurin -.-> CHEBI_8806
    ing14_Distilled_water["Distilled water"]
    CultureMech_015861 --> ing14_Distilled_water
    CHEBI_15377["CHEBI:15377"]
    ing14_Distilled_water -.-> CHEBI_15377
    ing15_8__NaHCO3_solution_["8% NaHCO3 solution*"]
    CultureMech_015861 --> ing15_8__NaHCO3_solution_
    ing16_1_0_M_HEPES_solution__pH_7_7_["1.0 M HEPES solution (pH 7.7)"]
    CultureMech_015861 --> ing16_1_0_M_HEPES_solution__pH_7_7_
    ing17_Vitamin_solution__see_Medium_No__898__["Vitamin solution (see Medium No. 898 )"]
    CultureMech_015861 --> ing17_Vitamin_solution__see_Medium_No__898__
    ing18_0_1_M_Dithiothreitol_solution["0.1 M Dithiothreitol solution"]
    CultureMech_015861 --> ing18_0_1_M_Dithiothreitol_solution

Ingredients (19)

# Ingredient Concentration Ontology Notes
1 Rumen fluid, clarified (see Medium No. 266) 20.0 ML_PER_L
2 NaCl
Cl.Na 58.443 g/mol
1.0 G_PER_L CHEBI:26710
sodium chloride
3 KCl
Cl.K 74.551 g/mol
0.5 G_PER_L CHEBI:32588
potassium chloride
4 MgCl2·6H2O
2Cl.6H2O.Mg 203.301 g/mol
0.4 G_PER_L CHEBI:86345
magnesium dichloride hexahydrate
5 CaCl2·2H2O
Ca.2Cl.2H2O 147.014 g/mol
0.1 G_PER_L CHEBI:86158
calcium chloride dihydrate
6 NH4Cl
Cl.H4N 53.492 g/mol
0.3 G_PER_L CHEBI:31206
ammonium chloride
7 KH2PO4
H2O4P.K 136.084 g/mol
0.2 G_PER_L CHEBI:63036
potassium dihydrogen phosphate
8 Na2SO4
2Na.O4S 142.043 g/mol
0.15 G_PER_L CHEBI:32149
sodium sulfate
9 Casamino acids (BD Difco) 0.5 G_PER_L
10 Yeast extract (Oxoid) 0.5 G_PER_L
11 FeCl2 solution (see Medium No. 187 ) 1.0 ML_PER_L
12 Trace element solution (see Medium No. 187 ) 1.0 ML_PER_L
13 Selenite-tungstate solution (see Medium No. 431 ) 1.0 ML_PER_L
14 Resazurin
C12H7NO4 229.191 g/mol
0.5 MG_PER_L CHEBI:8806
Resazurin
15 Distilled water
H2O 18.015 g/mol
900.0 ML_PER_L CHEBI:15377
water
16 8% NaHCO3 solution* 70.0 ML_PER_L
17 1.0 M HEPES solution (pH 7.7) 10.0 ML_PER_L
18 Vitamin solution (see Medium No. 898 ) 1.0 ML_PER_L
19 0.1 M Dithiothreitol solution 10.0 ML_PER_L

Preparation

  1. Mix components thoroughly, bring to a boil for 5-10 seconds, then, cool down under a stream of H2-CO2 (80:20 v/v).
  2. Distribute the medium into suitable culture vessels (e.g., 4.6 ml medium in Hungate tubes) under the same gas mixture and seal with butyl rubber stoppers.
  3. Autoclave.
  4. After cooling, aseptically and anaerobically add per liter the following solutions (autoclaved or *filter-sterilized): Prior to inoculation, add per liter the following solution (freshly prepared and filtersterilized): Adjust pH 7.7, if necessary.
  5. Pressurize the inoculated vessels to 200 kPa H2-CO2 (80:20v/ v).

Target organisms

No target organisms are recorded.

Provenance

Merged from 1 source record.

TimestampCuratorActionNotes
2026-06-02T07:09:11.558514+00:00 jcm-grmd-import Scraped from JCM GRMD database Direct import from JCM GRMD=1424. Ingredients captured verbatim; CHEBI/MediaIngredientMech enrichment and category (bacterial/archaea) review are downstream steps.
2026-06-03T02:00:03.304298Z chebi-enrichment Added CHEBI ontology terms to ingredients Enriched using MicrobeMediaParam and MediaDive chemical mappings
2026-06-03T07:12:22.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-08-06T03:04:20.569654+00:00 merge_recipes.py MERGED_RECIPES merged 1 source recipe(s) on fingerprint a34b04bef8194dff0ef0e3f4d0ca90b179c14e141d295c38a33422b192c974f9