Overview
- External ontology
- jcm.grmd:1465 (source link unavailable) — MODIFIED NMS MEDIUM-4
- Applications
-
- Microbial cultivation
- Notes
- Source: JCM | Link: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=1465
Composition
flowchart LR
CultureMech_015872["modified_nms_medium_4"]
ing0_KNO3["KNO3"]
CultureMech_015872 --> ing0_KNO3
CHEBI_63043["CHEBI:63043"]
ing0_KNO3 -.-> CHEBI_63043
ing1_MgSO4_7H2O["MgSO4·7H2O"]
CultureMech_015872 --> ing1_MgSO4_7H2O
CHEBI_31795["CHEBI:31795"]
ing1_MgSO4_7H2O -.-> CHEBI_31795
ing2_CaCl2_2H2O["CaCl2·2H2O"]
CultureMech_015872 --> ing2_CaCl2_2H2O
CHEBI_86158["CHEBI:86158"]
ing2_CaCl2_2H2O -.-> CHEBI_86158
ing3_Fe_III__EDTA["Fe(III)-EDTA"]
CultureMech_015872 --> ing3_Fe_III__EDTA
CHEBI_30729["CHEBI:30729"]
ing3_Fe_III__EDTA -.-> CHEBI_30729
ing4_Na2MoO4_2H2O["Na2MoO4·2H2O"]
CultureMech_015872 --> ing4_Na2MoO4_2H2O
CHEBI_75213["CHEBI:75213"]
ing4_Na2MoO4_2H2O -.-> CHEBI_75213
ing5_Na2HPO4_12H2O["Na2HPO4·12H2O"]
CultureMech_015872 --> ing5_Na2HPO4_12H2O
ing6_KH2PO4["KH2PO4"]
CultureMech_015872 --> ing6_KH2PO4
CHEBI_63036["CHEBI:63036"]
ing6_KH2PO4 -.-> CHEBI_63036
ing7_Trace_element_solution__see_below_["Trace element solution (see below)"]
CultureMech_015872 --> ing7_Trace_element_solution__see_below_
ing8_Distilled_water["Distilled water"]
CultureMech_015872 --> ing8_Distilled_water
CHEBI_15377["CHEBI:15377"]
ing8_Distilled_water -.-> CHEBI_15377
ing9_CuSO4_5H2O["CuSO4·5H2O"]
CultureMech_015872 --> ing9_CuSO4_5H2O
CHEBI_31440["CHEBI:31440"]
ing9_CuSO4_5H2O -.-> CHEBI_31440
ing10_FeSO4_7H2O["FeSO4·7H2O"]
CultureMech_015872 --> ing10_FeSO4_7H2O
ing11_ZnSO4_7H2O["ZnSO4·7H2O"]
CultureMech_015872 --> ing11_ZnSO4_7H2O
CHEBI_32312["CHEBI:32312"]
ing11_ZnSO4_7H2O -.-> CHEBI_32312
ing12_H3BO2["H3BO2"]
CultureMech_015872 --> ing12_H3BO2
CHEBI_33118["CHEBI:33118"]
ing12_H3BO2 -.-> CHEBI_33118
ing13_CoCl2_6H2O["CoCl2·6H2O"]
CultureMech_015872 --> ing13_CoCl2_6H2O
ing14_EDTA_2Na["EDTA·2Na"]
CultureMech_015872 --> ing14_EDTA_2Na
ing15_MnCl2_4H2O["MnCl2·4H2O"]
CultureMech_015872 --> ing15_MnCl2_4H2O
ing16_NiCl2_6H2O["NiCl2·6H2O"]
CultureMech_015872 --> ing16_NiCl2_6H2O
CHEBI_34887["CHEBI:34887"]
ing16_NiCl2_6H2O -.-> CHEBI_34887
Ingredients (17)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
KNO3
K.NO3 101.102 g/mol
|
1.0 G_PER_L |
CHEBI:63043
potassium nitrate
|
|
| 2 |
MgSO4·7H2O
7H2O.Mg.O4S 246.473 g/mol
|
1.0 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
|
| 3 |
CaCl2·2H2O
Ca.2Cl.2H2O 147.014 g/mol
|
0.2 G_PER_L |
CHEBI:86158
calcium chloride dihydrate
|
|
| 4 |
Fe(III)-EDTA
C10H12N2O8.Fe 344.057 g/mol
|
3.8 MG_PER_L |
CHEBI:30729
ethylenediaminetetraacetatoferrate(1-)
|
|
| 5 |
Na2MoO4·2H2O
2H2O.MoO4.2Na 241.946 g/mol
|
0.26 MG_PER_L |
CHEBI:75213
sodium molybdate dihydrate
|
|
| 6 | Na2HPO4·12H2O | 0.72 G_PER_L | ||
| 7 |
KH2PO4
H2O4P.K 136.084 g/mol
|
0.26 G_PER_L |
CHEBI:63036
potassium dihydrogen phosphate
|
|
| 8 | Trace element solution (see below) | 1.0 ML_PER_L | ||
| 9 |
Distilled water
H2O 18.015 g/mol
|
1.0 ML_PER_L |
CHEBI:15377
water
|
|
| 10 |
CuSO4·5H2O
Cu.5H2O.O4S 249.684 g/mol
|
0.2 G_PER_L |
CHEBI:31440
copper(II) sulfate pentahydrate
|
|
| 11 | FeSO4·7H2O | 0.5 G_PER_L | ||
| 12 |
ZnSO4·7H2O
7H2O.O4S.Zn 287.558 g/mol
|
0.4 G_PER_L |
CHEBI:32312
zinc sulfate heptahydrate
|
|
| 13 |
H3BO2
H3BO3 61.833 g/mol
|
0.02 G_PER_L |
CHEBI:33118
boric acid
|
|
| 14 | CoCl2·6H2O | 0.05 G_PER_L | ||
| 15 | EDTA·2Na | 0.25 G_PER_L | ||
| 16 | MnCl2·4H2O | 0.02 G_PER_L | ||
| 17 |
NiCl2·6H2O
Cl2Ni 129.599 g/mol
|
0.01 G_PER_L |
CHEBI:34887
nickel dichloride
|
Preparation
- Mix components and autoclave.
- Aseptically distribute the medium into sterile serum bottles (leave ≥ 80% gas phase by volume) and seal with rubber stoppers.
- Replace the gas phase with an air-methane gas mixture (82:18, v/v).
Target organisms
No target organisms are recorded.
Provenance
Merged from 1 source record.
- JCM_J1465_MODIFIED_NMS_MEDIUM_4 (CultureMech:015872)
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-06-02T07:09:24.407182+00:00 | jcm-grmd-import | Scraped from JCM GRMD database | Direct import from JCM GRMD=1465. Ingredients captured verbatim; CHEBI/MediaIngredientMech enrichment and category (bacterial/archaea) review are downstream steps. |
| 2026-06-03T02:00:03.425998Z | chebi-enrichment | Added CHEBI ontology terms to ingredients | Enriched using MicrobeMediaParam and MediaDive chemical mappings |
| 2026-06-03T07:12:22.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-08-06T03:04:35.700043+00:00 | merge_recipes.py | MERGED_RECIPES | merged 1 source recipe(s) on fingerprint 6e45c497b2aa93620f9f748805537564e6ab77a3b41cf837e2466e4729f4148b |
| 2026-08-15T20:09:32.423267+00:00 | dedupe_identical_ingredients.py | REMOVED_DUPLICATE_INGREDIENT_ROWS | Removed 1 ingredient row(s) that were identical in every field to another row in this record, which made the recipe read as double-strength in those components (#263): Distilled water. |