marinagarivorans_sp_ge09_medium

CultureMech:015838 bacterial DEFINED LIQUID
Original name: Marinagarivorans sp. GE09 medium

Overview

External ontology
jcm.grmd:1357 (source link unavailable) — Marinagarivorans sp. GE09 medium
Applications
  • Microbial cultivation
Notes
Source: JCM | Link: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=1357

Composition

flowchart LR
    CultureMech_015838["marinagarivorans_sp_ge09_medium"]
    ing0__NH4_2SO4["(NH4)2SO4"]
    CultureMech_015838 --> ing0__NH4_2SO4
    CHEBI_62946["CHEBI:62946"]
    ing0__NH4_2SO4 -.-> CHEBI_62946
    ing1_Cellobiose["Cellobiose"]
    CultureMech_015838 --> ing1_Cellobiose
    CHEBI_17057["CHEBI:17057"]
    ing1_Cellobiose -.-> CHEBI_17057
    ing2_Urea["Urea"]
    CultureMech_015838 --> ing2_Urea
    CHEBI_16199["CHEBI:16199"]
    ing2_Urea -.-> CHEBI_16199
    ing3_Trace_mineral_solution__see_below_["Trace mineral solution (see below)"]
    CultureMech_015838 --> ing3_Trace_mineral_solution__see_below_
    ing4_Artificial_seawater["Artificial seawater"]
    CultureMech_015838 --> ing4_Artificial_seawater
    ing5_Na2CO3["Na2CO3"]
    CultureMech_015838 --> ing5_Na2CO3
    CHEBI_29377["CHEBI:29377"]
    ing5_Na2CO3 -.-> CHEBI_29377
    ing6_Trace_Metal_Mix_A5__see_below_["Trace Metal Mix A5 (see below)"]
    CultureMech_015838 --> ing6_Trace_Metal_Mix_A5__see_below_
    ing7_EDTA_Na2["EDTA·Na2"]
    CultureMech_015838 --> ing7_EDTA_Na2
    ing8_Ferric_ammonium_citrate["Ferric ammonium citrate"]
    CultureMech_015838 --> ing8_Ferric_ammonium_citrate
    CHEBI_31604["CHEBI:31604"]
    ing8_Ferric_ammonium_citrate -.-> CHEBI_31604
    ing9_K2HPO4["K2HPO4"]
    CultureMech_015838 --> ing9_K2HPO4
    CHEBI_131527["CHEBI:131527"]
    ing9_K2HPO4 -.-> CHEBI_131527
    ing10_Distilled_water["Distilled water"]
    CultureMech_015838 --> ing10_Distilled_water
    CHEBI_15377["CHEBI:15377"]
    ing10_Distilled_water -.-> CHEBI_15377
    ing11_KNO3["KNO3"]
    CultureMech_015838 --> ing11_KNO3
    CHEBI_63043["CHEBI:63043"]
    ing11_KNO3 -.-> CHEBI_63043
    ing12_MnCl2_4H2O["MnCl2·4H2O"]
    CultureMech_015838 --> ing12_MnCl2_4H2O
    ing13_ZnSO4_7H2O["ZnSO4·7H2O"]
    CultureMech_015838 --> ing13_ZnSO4_7H2O
    CHEBI_32312["CHEBI:32312"]
    ing13_ZnSO4_7H2O -.-> CHEBI_32312
    ing14_Na2MnO4_2H2O["Na2MnO4·2H2O"]
    CultureMech_015838 --> ing14_Na2MnO4_2H2O
    ing15_CuSO4_5H2O["CuSO4·5H2O"]
    CultureMech_015838 --> ing15_CuSO4_5H2O
    CHEBI_31440["CHEBI:31440"]
    ing15_CuSO4_5H2O -.-> CHEBI_31440
    ing16_Co_NO3_2_6H2O["Co(NO3)2·6H2O"]
    CultureMech_015838 --> ing16_Co_NO3_2_6H2O
    CHEBI_86214["CHEBI:86214"]
    ing16_Co_NO3_2_6H2O -.-> CHEBI_86214

Ingredients (17)

# Ingredient Concentration Ontology Notes
1 (NH4)2SO4
2H4N.O4S 132.141 g/mol
0.132 G_PER_L CHEBI:62946
ammonium sulfate
2 Cellobiose
C12H22O11 342.297 g/mol
1.0 G_PER_L CHEBI:17057
cellobiose
3 Urea
CH4N2O 60.056 g/mol
0.06 G_PER_L CHEBI:16199
urea
4 Trace mineral solution (see below) 50.0 ML_PER_L
5 Artificial seawater 1.0 ML_PER_L
6 Na2CO3
CO3.2Na 105.988 g/mol
0.4 G_PER_L CHEBI:29377
sodium carbonate
7 Trace Metal Mix A5 (see below) 20.0 ML_PER_L
8 EDTA·Na2 20.0 MG_PER_L
9 Ferric ammonium citrate 0.12 G_PER_L CHEBI:31604
ferric ammonium citrate
10 K2HPO4
HO4P.2K 174.174 g/mol
0.4 G_PER_L CHEBI:131527
dipotassium hydrogen phosphate
11 Distilled water
H2O 18.015 g/mol
1.0 ML_PER_L CHEBI:15377
water
12 KNO3
K.NO3 101.102 g/mol
2.86 G_PER_L CHEBI:63043
potassium nitrate
13 MnCl2·4H2O 1.81 G_PER_L
14 ZnSO4·7H2O
7H2O.O4S.Zn 287.558 g/mol
0.222 G_PER_L CHEBI:32312
zinc sulfate heptahydrate
15 Na2MnO4·2H2O 0.39 G_PER_L
16 CuSO4·5H2O
Cu.5H2O.O4S 249.684 g/mol
0.079 G_PER_L CHEBI:31440
copper(II) sulfate pentahydrate
17 Co(NO3)2·6H2O
Co.6H2O.2NO3 291.031 g/mol
49.4 MG_PER_L CHEBI:86214
cobalt dinitrate hexahydrate

Preparation

  1. Filter-sterilize with 0.22 µm PES filter.

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-06-02T07:08:46.627391+00:00 jcm-grmd-import Scraped from JCM GRMD database Direct import from JCM GRMD=1357. Ingredients captured verbatim; CHEBI/MediaIngredientMech enrichment and category (bacterial/archaea) review are downstream steps.
2026-06-03T02:00:03.470271Z chebi-enrichment Added CHEBI ontology terms to ingredients Enriched using MicrobeMediaParam and MediaDive chemical mappings
2026-06-03T07:12:22.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-08-15T20:07:34.023678+00:00 dedupe_identical_ingredients.py REMOVED_DUPLICATE_INGREDIENT_ROWS Removed 1 ingredient row(s) that were identical in every field to another row in this record, which made the recipe read as double-strength in those components (#263): Distilled water.