acidic_low_salt_mineral_medium

CultureMech:015843 bacterial DEFINED LIQUID
Original name: ACIDIC LOW SALT MINERAL MEDIUM

Overview

External ontology
jcm.grmd:1365 (source link unavailable) — ACIDIC LOW SALT MINERAL MEDIUM
Applications
  • Microbial cultivation
Notes
Source: JCM | Link: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=1365

Composition

flowchart LR
    CultureMech_015843["acidic_low_salt_mineral_medium"]
    ing0_MgSO4_7H2O["MgSO4·7H2O"]
    CultureMech_015843 --> ing0_MgSO4_7H2O
    CHEBI_31795["CHEBI:31795"]
    ing0_MgSO4_7H2O -.-> CHEBI_31795
    ing1_CaCl2_2H2O["CaCl2·2H2O"]
    CultureMech_015843 --> ing1_CaCl2_2H2O
    CHEBI_86158["CHEBI:86158"]
    ing1_CaCl2_2H2O -.-> CHEBI_86158
    ing2_K2SO4["K2SO4"]
    CultureMech_015843 --> ing2_K2SO4
    CHEBI_32036["CHEBI:32036"]
    ing2_K2SO4 -.-> CHEBI_32036
    ing3__NH4_2SO4["(NH4)2SO4"]
    CultureMech_015843 --> ing3__NH4_2SO4
    CHEBI_62946["CHEBI:62946"]
    ing3__NH4_2SO4 -.-> CHEBI_62946
    ing4_FeCl2_solution__see_Medium_No__187__["FeCl2 solution (see Medium No. 187 )"]
    CultureMech_015843 --> ing4_FeCl2_solution__see_Medium_No__187__
    ing5_Trace_element_solution__see_Medium_No__187__["Trace element solution (see Medium No. 187 )"]
    CultureMech_015843 --> ing5_Trace_element_solution__see_Medium_No__187__
    ing6_Selenite_tungustate_solution__see_below_["Selenite-tungustate solution (see below)"]
    CultureMech_015843 --> ing6_Selenite_tungustate_solution__see_below_
    ing7_Distilled_water["Distilled water"]
    CultureMech_015843 --> ing7_Distilled_water
    CHEBI_15377["CHEBI:15377"]
    ing7_Distilled_water -.-> CHEBI_15377
    ing8_0_1_M_KH2PO4_solution["0.1 M KH2PO4 solution"]
    CultureMech_015843 --> ing8_0_1_M_KH2PO4_solution
    ing9_Trace_vitamins___see_Medium_No__197__["Trace vitamins* (see Medium No. 197 )"]
    CultureMech_015843 --> ing9_Trace_vitamins___see_Medium_No__197__
    ing10_Vitamin_B12_solution___see_Medium_No__403__["Vitamin B12 solution* (see Medium No. 403 )"]
    CultureMech_015843 --> ing10_Vitamin_B12_solution___see_Medium_No__403__
    ing11_1_0_mM_CeCl3_solution_["1.0 mM CeCl3 solution*"]
    CultureMech_015843 --> ing11_1_0_mM_CeCl3_solution_
    ing12_1_0_N_H2SO4_solution_["1.0 N H2SO4 solution*"]
    CultureMech_015843 --> ing12_1_0_N_H2SO4_solution_
    ing13_NaOH["NaOH"]
    CultureMech_015843 --> ing13_NaOH
    CHEBI_32145["CHEBI:32145"]
    ing13_NaOH -.-> CHEBI_32145
    ing14_Na2SeO3_5H2O["Na2SeO3·5H2O"]
    CultureMech_015843 --> ing14_Na2SeO3_5H2O
    CHEBI_131361["CHEBI:131361"]
    ing14_Na2SeO3_5H2O -.-> CHEBI_131361
    ing15_Na2WO4_2H2O["Na2WO4·2H2O"]
    CultureMech_015843 --> ing15_Na2WO4_2H2O
    CHEBI_63939["CHEBI:63939"]
    ing15_Na2WO4_2H2O -.-> CHEBI_63939

Ingredients (16)

# Ingredient Concentration Ontology Notes
1 MgSO4·7H2O
7H2O.Mg.O4S 246.473 g/mol
98.6 MG_PER_L CHEBI:31795
magnesium sulfate heptahydrate
2 CaCl2·2H2O
Ca.2Cl.2H2O 147.014 g/mol
14.7 MG_PER_L CHEBI:86158
calcium chloride dihydrate
3 K2SO4
2K.O4S 174.259 g/mol
34.9 MG_PER_L CHEBI:32036
potassium sulfate
4 (NH4)2SO4
2H4N.O4S 132.141 g/mol
0.264 G_PER_L CHEBI:62946
ammonium sulfate
5 FeCl2 solution (see Medium No. 187 ) 1.0 ML_PER_L
6 Trace element solution (see Medium No. 187 ) 1.0 ML_PER_L
7 Selenite-tungustate solution (see below) 1.0 ML_PER_L
8 Distilled water
H2O 18.015 g/mol
1.0 ML_PER_L CHEBI:15377
water
9 0.1 M KH2PO4 solution 1.0 ML_PER_L
10 Trace vitamins* (see Medium No. 197 ) 10.0 ML_PER_L
11 Vitamin B12 solution* (see Medium No. 403 ) 4.0 ML_PER_L
12 1.0 mM CeCl3 solution* 1.0 ML_PER_L
13 1.0 N H2SO4 solution* 4.0 ML_PER_L
14 NaOH
HO.Na 39.997 g/mol
0.4 G_PER_L CHEBI:32145
sodium hydroxide
15 Na2SeO3·5H2O
5H2O.2Na.O3Se 263.012 g/mol
0.06 G_PER_L CHEBI:131361
disodium selenite pentahydrate
16 Na2WO4·2H2O
2H2O.2Na.O4W 329.846 g/mol
0.08 G_PER_L CHEBI:63939
sodium tungstate dihydrate

Preparation

  1. Mix components thoroughly.
  2. For preparation of solid medium, add 15.0 g/L agarose.
  3. Autoclave and, after cooling to 60C, add the following solutions (autoclaved or *filter-sterilized): Check pH to be 2.0 to 3.0.
  4. Cultivate with methane or methanol as a substrate as described below: Methane.
  5. Aseptically distribute the medium into sterile serum bottles (leave ≥ 80% gas phase by volume) and seal with rubber stoppers.
  6. Add sterile CO2 and methane (respectively 2-10% and 5-20% by volume) in the gas phase.
  7. Cultivate with shaking.
  8. Methanol: Aseptically distribute the medium into culture vessels (e.g., 10 ml in 60 ml serum bottles), supplement with 0.4-1.0 ml per liter methanol (filter-sterilized) and seal with rubber stoppers.
  9. Add sterile CO2 (2-10% by volume) in the gas phase.

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-06-02T07:08:51.886117+00:00 jcm-grmd-import Scraped from JCM GRMD database Direct import from JCM GRMD=1365. Ingredients captured verbatim; CHEBI/MediaIngredientMech enrichment and category (bacterial/archaea) review are downstream steps.
2026-06-03T02:00:03.338054Z chebi-enrichment Added CHEBI ontology terms to ingredients Enriched using MicrobeMediaParam and MediaDive chemical mappings
2026-06-03T07:12:22.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-08-15T20:07:34.049328+00:00 dedupe_identical_ingredients.py REMOVED_DUPLICATE_INGREDIENT_ROWS Removed 1 ingredient row(s) that were identical in every field to another row in this record, which made the recipe read as double-strength in those components (#263): Distilled water.