{"cross_mech":[],"family":{"alphafold_models":12368,"candidate_reasons":["pfam_previous_unknown_name"],"characterization_status":"","context_evidence_count":null,"cross_mech":{"example_proteins":0,"protein_traits_record":false,"records_by_mech":{},"scanned":false},"curation_status":"SEEDED","demotion_reasons":[],"description":"This family includes the TusA sulfurtransferases [[cite:PUB00043028]].","domain_architectures":48,"interpro_id":"IPR001455","known_evidence_count":null,"matches":18447,"name":"Sulfurtransferase TusA","partial_evidence_count":null,"pfam_id":"PF01206","proteins":18434,"proteomes":11553,"short_name":"TusA","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF01206","structures":9,"taxa":16830,"unknown_status":"EX_DUF"},"inputs":{"cross_mech":"cross-mech-duf-examples-2026-10-10","members":"pfam-uniprot-uniref90-2026-10-07","protein_examples":"duf-protein-examples-2026-10-13","worklist":"interpro-pfam-duf-2026-10-10"},"members":[],"metadata":{"curation_status":"SEEDED","local_source":"source/data/families/PF01206.yaml","record":{"characterization_status":"UNSCORED","counters":{"alphafold_models":12368,"domain_architectures":48,"matches":18447,"proteins":18434,"proteomes":11553,"structures":9,"taxa":16830},"curation_status":"SEEDED","description":"This family includes the TusA sulfurtransferases [[cite:PUB00043028]].","id":"Pfam:PF01206","interpro_id":"InterPro:IPR001455","name":"Sulfurtransferase TusA","pfam_id":"PF01206","provenance":{"generated_at":"2026-10-10T07:44:21.614711Z","path":"data/worklists/interpro-pfam-duf-2026-10-10.json","sha256":"17fb625876c9326ed284263a47bcd84e0d7844a31c040dc06cd2260c36f1c383","snapshot_id":"interpro-pfam-duf-2026-10-10","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/"},"seed_status":"EX_DUF","short_name":"TusA","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF01206"},"source":{"commit":"c8155abfcf881ad8662936343deb81e604e3a194","path":"data/families/PF01206.yaml","repository":"https://github.com/CultureBotAI/DUFMech","sha256":"b4d58cd5f779e8b1d7bad04fa705636b79e81ed2b283c19d4a7356ca02ccf6db"}},"protein_examples":{"candidate_count":10,"discovery_scanned":true,"example_count":10,"examples":[{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/pattern/upf0033.yaml","qualification_status":"NOT_ASSESSED","record_id":"PROSITE:PS01148","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/pattern/upf0033.yaml"}],"pfam_ids":["PF01206"],"protein_name":"Sulfur carrier protein TusA","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MADFDQELDASGLNCPLPILRAKKTLNAMSSGQVLHVIATDPGSVKDFDAFAKQTGNELMESKEEGGKFHFLIKKS","sequence_length":76,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"0b91218f72dc7e8c162b13795575c246deeea39ab8aa2b7f2ca9f8089a32eb83","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/D3RPC0.json","taxon_id":"572477","uniprot_accession":"D3RPC0","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Escherichia coli (strain K12)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/function/protein_family/ncbifam/sulfurtransferase-tusa-nf001423.yaml","qualification_status":"NOT_ASSESSED","record_id":"NCBIfam:NF001423","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/function/protein_family/ncbifam/sulfurtransferase-tusa-nf001423.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/cdd/sira-also-known-as-uvry-and-yhhp-belongs-to-a-family-of-two-component--cd03423.yaml","qualification_status":"NOT_ASSESSED","record_id":"CDD:cd03423","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/cdd/sira-also-known-as-uvry-and-yhhp-belongs-to-a-family-of-two-component--cd03423.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/interpro/tusa-like-domain-ipr001455.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR001455","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/interpro/tusa-like-domain-ipr001455.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/pfam/tusa-pf01206.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF01206","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/pfam/tusa-pf01206.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/homologous_superfamily/interpro/tusa-like-domain-superfamily-ipr036868.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR036868","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/homologous_superfamily/interpro/tusa-like-domain-superfamily-ipr036868.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/pattern/upf0033.yaml","qualification_status":"NOT_ASSESSED","record_id":"PROSITE:PS01148","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/pattern/upf0033.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/structure/homologous_superfamily/cath/tusa-like-domain-3-30-110-40.yaml","qualification_status":"NOT_ASSESSED","record_id":"CATH:3.30.110.40","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/structure/homologous_superfamily/cath/tusa-like-domain-3-30-110-40.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["ptm_registry_exact_uniprot_pfam_xref"],"mech":"ProteinTraitsMech","path":"data/grounding/protein_registry.jsonl","qualification_status":"NOT_ASSESSED_FOR_THIS_FAMILY","record_id":"UniProtKB:P0A890","section":"protein_registry","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/grounding/protein_registry.jsonl"}],"pfam_ids":["PF01206"],"protein_name":"Sulfur carrier protein TusA","registry_source":{"commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","path":"data/grounding/protein_registry.jsonl","repository":"https://github.com/CultureBotAI/proteintraitsmech","sequence_sha256":"16182a3f1880609b3ba7863146f4c88edd3ebe5a01e1683acf472f05ed0b1477","sequence_version":1,"sha256":"1be0cf02b76b03a8fe9b80bcead9cd4a419157116eb8da038f266bcc33015eb9","uniprot_release":"2026_03","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/grounding/protein_registry.jsonl"},"registry_status":"EXACT_SEQUENCE_VERSION_MATCH","reviewed":true,"sequence":"MTDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRKGG","sequence_length":81,"sequence_origin":"PTM_REGISTRY_MIRROR","sequence_sha256":"16182a3f1880609b3ba7863146f4c88edd3ebe5a01e1683acf472f05ed0b1477","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/P0A890.json","taxon_id":"83333","uniprot_accession":"P0A890","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Escherichia coli O157:H7","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/pattern/upf0033.yaml","qualification_status":"NOT_ASSESSED","record_id":"PROSITE:PS01148","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/pattern/upf0033.yaml"}],"pfam_ids":["PF01206"],"protein_name":"Sulfur carrier protein TusA","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MTDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRKGG","sequence_length":81,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"16182a3f1880609b3ba7863146f4c88edd3ebe5a01e1683acf472f05ed0b1477","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/P0A892.json","taxon_id":"83334","uniprot_accession":"P0A892","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Escherichia coli (strain K12)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/function/protein_family/ncbifam/sulfurtransferase-like-selenium-metabolism-protein-yedf-nf008242.yaml","qualification_status":"NOT_ASSESSED","record_id":"NCBIfam:NF008242","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/function/protein_family/ncbifam/sulfurtransferase-like-selenium-metabolism-protein-yedf-nf008242.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/cdd/yedf-is-a-bacterial-sira-like-protein-of-unknown-function-sira-also-kn-cd03422.yaml","qualification_status":"NOT_ASSESSED","record_id":"CDD:cd03422","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/cdd/yedf-is-a-bacterial-sira-like-protein-of-unknown-function-sira-also-kn-cd03422.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/interpro/tusa-like-domain-ipr001455.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR001455","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/interpro/tusa-like-domain-ipr001455.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/pfam/tusa-pf01206.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF01206","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/pfam/tusa-pf01206.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/homologous_superfamily/interpro/tusa-like-domain-superfamily-ipr036868.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR036868","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/homologous_superfamily/interpro/tusa-like-domain-superfamily-ipr036868.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/structure/homologous_superfamily/cath/tusa-like-domain-3-30-110-40.yaml","qualification_status":"NOT_ASSESSED","record_id":"CATH:3.30.110.40","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/structure/homologous_superfamily/cath/tusa-like-domain-3-30-110-40.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["ptm_registry_exact_uniprot_pfam_xref"],"mech":"ProteinTraitsMech","path":"data/grounding/protein_registry.jsonl","qualification_status":"NOT_ASSESSED_FOR_THIS_FAMILY","record_id":"UniProtKB:P0AA31","section":"protein_registry","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/grounding/protein_registry.jsonl"}],"pfam_ids":["PF01206"],"protein_name":"Putative sulfur carrier protein YedF","registry_source":{"commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","path":"data/grounding/protein_registry.jsonl","repository":"https://github.com/CultureBotAI/proteintraitsmech","sequence_sha256":"3454584dc9f305a25d495349a09cbf5f8671ce47dad26cd1a563793601cc19a5","sequence_version":1,"sha256":"1be0cf02b76b03a8fe9b80bcead9cd4a419157116eb8da038f266bcc33015eb9","uniprot_release":"2026_03","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/grounding/protein_registry.jsonl"},"registry_status":"EXACT_SEQUENCE_VERSION_MATCH","reviewed":true,"sequence":"MKNIVPDYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVVSDCPQSINNIPLDARNHGYTVLDIQQDGPTIRYLIQK","sequence_length":77,"sequence_origin":"PTM_REGISTRY_MIRROR","sequence_sha256":"3454584dc9f305a25d495349a09cbf5f8671ce47dad26cd1a563793601cc19a5","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/P0AA31.json","taxon_id":"83333","uniprot_accession":"P0AA31","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Escherichia coli (strain K12)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/function/protein_family/ncbifam/thiosulfate-utilization-sulfurtransferase-tsub-yeed-nf041048.yaml","qualification_status":"NOT_ASSESSED","record_id":"NCBIfam:NF041048","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/function/protein_family/ncbifam/thiosulfate-utilization-sulfurtransferase-tsub-yeed-nf041048.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/cdd/sira-yedf-and-yeed-two-layered-alpha-beta-sandwich-domain-sira-also-kn-cd00291.yaml","qualification_status":"NOT_ASSESSED","record_id":"CDD:cd00291","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/cdd/sira-yedf-and-yeed-two-layered-alpha-beta-sandwich-domain-sira-also-kn-cd00291.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/interpro/tusa-like-domain-ipr001455.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR001455","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/interpro/tusa-like-domain-ipr001455.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/pfam/tusa-pf01206.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF01206","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/pfam/tusa-pf01206.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/homologous_superfamily/interpro/tusa-like-domain-superfamily-ipr036868.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR036868","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/homologous_superfamily/interpro/tusa-like-domain-superfamily-ipr036868.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/pattern/upf0033.yaml","qualification_status":"NOT_ASSESSED","record_id":"PROSITE:PS01148","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/pattern/upf0033.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/structure/homologous_superfamily/cath/tusa-like-domain-3-30-110-40.yaml","qualification_status":"NOT_ASSESSED","record_id":"CATH:3.30.110.40","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/structure/homologous_superfamily/cath/tusa-like-domain-3-30-110-40.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["ptm_registry_exact_uniprot_pfam_xref"],"mech":"ProteinTraitsMech","path":"data/grounding/protein_registry.jsonl","qualification_status":"NOT_ASSESSED_FOR_THIS_FAMILY","record_id":"UniProtKB:P33014","section":"protein_registry","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/grounding/protein_registry.jsonl"}],"pfam_ids":["PF01206"],"protein_name":"Putative sulfur carrier protein TsuB","registry_source":{"commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","path":"data/grounding/protein_registry.jsonl","repository":"https://github.com/CultureBotAI/proteintraitsmech","sequence_sha256":"631892f525b02a43534f04e220565fb19b372f685af95ccac2b8e673f5cb778b","sequence_version":1,"sha256":"1be0cf02b76b03a8fe9b80bcead9cd4a419157116eb8da038f266bcc33015eb9","uniprot_release":"2026_03","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/grounding/protein_registry.jsonl"},"registry_status":"EXACT_SEQUENCE_VERSION_MATCH","reviewed":true,"sequence":"MVIKKLDVVTQVCPFPLIEAKAALAEMVSGDELVIEFDCTQATEAIPQWAAEEGHAITDYQQIGDAAWSITVQKA","sequence_length":75,"sequence_origin":"PTM_REGISTRY_MIRROR","sequence_sha256":"631892f525b02a43534f04e220565fb19b372f685af95ccac2b8e673f5cb778b","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/P33014.json","taxon_id":"83333","uniprot_accession":"P33014","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Bacillus subtilis (strain 168)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/cdd/sira-yedf-and-yeed-two-layered-alpha-beta-sandwich-domain-sira-also-kn-cd00291.yaml","qualification_status":"NOT_ASSESSED","record_id":"CDD:cd00291","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/cdd/sira-yedf-and-yeed-two-layered-alpha-beta-sandwich-domain-sira-also-kn-cd00291.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/interpro/tusa-like-domain-ipr001455.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR001455","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/interpro/tusa-like-domain-ipr001455.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/pfam/tusa-pf01206.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF01206","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/pfam/tusa-pf01206.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/homologous_superfamily/interpro/tusa-like-domain-superfamily-ipr036868.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR036868","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/homologous_superfamily/interpro/tusa-like-domain-superfamily-ipr036868.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/structure/homologous_superfamily/cath/tusa-like-domain-3-30-110-40.yaml","qualification_status":"NOT_ASSESSED","record_id":"CATH:3.30.110.40","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/structure/homologous_superfamily/cath/tusa-like-domain-3-30-110-40.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["ptm_registry_exact_uniprot_pfam_xref"],"mech":"ProteinTraitsMech","path":"data/grounding/protein_registry.jsonl","qualification_status":"NOT_ASSESSED_FOR_THIS_FAMILY","record_id":"UniProtKB:P54433","section":"protein_registry","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/grounding/protein_registry.jsonl"}],"pfam_ids":["PF00581","PF01206"],"protein_name":"Putative sulfur carrier protein YrkF","registry_source":{"commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","path":"data/grounding/protein_registry.jsonl","repository":"https://github.com/CultureBotAI/proteintraitsmech","sequence_sha256":"bbe75c222ac3d87c378d5709f326406a4956ccbc41649527b3381647d4f7fb00","sequence_version":1,"sha256":"1be0cf02b76b03a8fe9b80bcead9cd4a419157116eb8da038f266bcc33015eb9","uniprot_release":"2026_03","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/grounding/protein_registry.jsonl"},"registry_status":"EXACT_SEQUENCE_VERSION_MATCH","reviewed":true,"sequence":"MMKATIVLDAKGLACPMPIVKTKKRMKDLKAGEVLEIHATDKGSTADLEAWAKSTGHEYLGTEAEGEILRHFLRKGGEHSSENASSIPEISLEAFKQKVDSDESLNILDVREIEEYEKAHIPGVVHIPLGEVEKRANELNENDEIYIICHSGRRSEMAARTMKKQGFKKVINVVPGMRDWTGKTE","sequence_length":185,"sequence_origin":"PTM_REGISTRY_MIRROR","sequence_sha256":"bbe75c222ac3d87c378d5709f326406a4956ccbc41649527b3381647d4f7fb00","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/P54433.json","taxon_id":"224308","uniprot_accession":"P54433","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Bacillus subtilis (strain 168)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/cdd/sira-yedf-and-yeed-two-layered-alpha-beta-sandwich-domain-sira-also-kn-cd00291.yaml","qualification_status":"NOT_ASSESSED","record_id":"CDD:cd00291","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/cdd/sira-yedf-and-yeed-two-layered-alpha-beta-sandwich-domain-sira-also-kn-cd00291.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/interpro/tusa-like-domain-ipr001455.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR001455","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/interpro/tusa-like-domain-ipr001455.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/pfam/tusa-pf01206.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF01206","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/pfam/tusa-pf01206.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/homologous_superfamily/interpro/tusa-like-domain-superfamily-ipr036868.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR036868","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/homologous_superfamily/interpro/tusa-like-domain-superfamily-ipr036868.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/structure/homologous_superfamily/cath/tusa-like-domain-3-30-110-40.yaml","qualification_status":"NOT_ASSESSED","record_id":"CATH:3.30.110.40","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/structure/homologous_superfamily/cath/tusa-like-domain-3-30-110-40.yaml"}],"pfam_ids":["PF01206"],"protein_name":"Putative sulfur carrier protein YrkI","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MKSDKVLDAKGLACPMPIVRTKKAMNELESGQILEVHATDKGAKNDLTAWSKSGGHDLLEQTDEGDILKFWIQKG","sequence_length":75,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"82ff5da8d1e7d1599329a736a1ca0342980ebe97fe52fe86051ee07fded4b968","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/P54436.json","taxon_id":"224308","uniprot_accession":"P54436","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Salmonella choleraesuis (strain SC-B67)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/pattern/upf0033.yaml","qualification_status":"NOT_ASSESSED","record_id":"PROSITE:PS01148","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/pattern/upf0033.yaml"}],"pfam_ids":["PF01206"],"protein_name":"Sulfur carrier protein TusA","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MSDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQTGETLLIIADDPATTRDIPGFCTFMEHDLLAQETEGLPYRYLLRKAH","sequence_length":81,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"e66fd11f004dd80b7441d6e56a8197022ac403c71588cc0089d0036633c2c11f","sequence_version":2,"source_url":"https://rest.uniprot.org/uniprotkb/Q57IP9.json","taxon_id":"321314","uniprot_accession":"Q57IP9","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/cdd/sira-yedf-and-yeed-two-layered-alpha-beta-sandwich-domain-sira-also-kn-cd00291.yaml","qualification_status":"NOT_ASSESSED","record_id":"CDD:cd00291","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/cdd/sira-yedf-and-yeed-two-layered-alpha-beta-sandwich-domain-sira-also-kn-cd00291.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/interpro/tusa-like-domain-ipr001455.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR001455","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/interpro/tusa-like-domain-ipr001455.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/pfam/tusa-pf01206.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF01206","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/pfam/tusa-pf01206.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/homologous_superfamily/interpro/dsrefh-like-ipr027396.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR027396","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/homologous_superfamily/interpro/dsrefh-like-ipr027396.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/homologous_superfamily/interpro/tusa-like-domain-superfamily-ipr036868.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR036868","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/homologous_superfamily/interpro/tusa-like-domain-superfamily-ipr036868.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/structure/homologous_superfamily/cath/dsrefh-like-3-40-1260-10.yaml","qualification_status":"NOT_ASSESSED","record_id":"CATH:3.40.1260.10","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/structure/homologous_superfamily/cath/dsrefh-like-3-40-1260-10.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/structure/homologous_superfamily/cath/tusa-like-domain-3-30-110-40.yaml","qualification_status":"NOT_ASSESSED","record_id":"CATH:3.30.110.40","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/structure/homologous_superfamily/cath/tusa-like-domain-3-30-110-40.yaml"}],"pfam_ids":["PF01206","PF02635"],"protein_name":"Uncharacterized protein MJ0760","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MIRMIRKFKVKGLRSPSLLIDMILNDTEEGILVVETDGEEQIKDIEKLLKKYNLKYEVDGNVVKIYVGEIKADKTINVVGATCPGPIMMVSDMLSKMKNGEILEIICGKNSLTDLTEGLKGMGNEIIKVEDKGDGTYRILVKKGEKKEEKAAVTKIDELFIINTTGTGNAEKAYATFMMADVALKMNLKPTIFLMMDGASLALKGECDRVKHPAFPKLGDLVRDILSKGVKIYVCELSAEFRGINEKNLEEGFEIAGAPTFLNYLSKPNVRPVWL","sequence_length":275,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"f858ad7b025666d31d8395f0c51022414c476e35beed35961acf0d9a5557bc25","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/Q58170.json","taxon_id":"243232","uniprot_accession":"Q58170","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/cdd/sira-yedf-and-yeed-two-layered-alpha-beta-sandwich-domain-sira-also-kn-cd00291.yaml","qualification_status":"NOT_ASSESSED","record_id":"CDD:cd00291","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/cdd/sira-yedf-and-yeed-two-layered-alpha-beta-sandwich-domain-sira-also-kn-cd00291.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/interpro/tusa-like-domain-ipr001455.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR001455","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/interpro/tusa-like-domain-ipr001455.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/pfam/tusa-pf01206.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF01206","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/pfam/tusa-pf01206.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/homologous_superfamily/interpro/tusa-like-domain-superfamily-ipr036868.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR036868","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/homologous_superfamily/interpro/tusa-like-domain-superfamily-ipr036868.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/structure/homologous_superfamily/cath/tusa-like-domain-3-30-110-40.yaml","qualification_status":"NOT_ASSESSED","record_id":"CATH:3.30.110.40","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/structure/homologous_superfamily/cath/tusa-like-domain-3-30-110-40.yaml"}],"pfam_ids":["PF01206"],"protein_name":"Putative sulfur carrier protein MJ0990","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MVIAMKKLDVTGDICPVPVLKTKKALEELNEGEELEVVGDYKPALENIKRFAENNGYTVVLAEETESRFRIVIKK","sequence_length":75,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"d198b4196d3caab933aefd117ac30d4210e88cf95cb13f432e4bfb95c2fd2534","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/Q58397.json","taxon_id":"243232","uniprot_accession":"Q58397","uniprot_release":"2026_03"}],"pfam_id":"PF01206","short_name":"TusA","status":"HAS_SEQUENCE_EXAMPLE","unresolved":[]}}
