{"cross_mech":[],"family":{"alphafold_models":2451,"candidate_reasons":["pfam_previous_unknown_name"],"characterization_status":"","context_evidence_count":null,"cross_mech":{"example_proteins":0,"protein_traits_record":false,"records_by_mech":{},"scanned":false},"curation_status":"SEEDED","demotion_reasons":[],"description":"YajB, now renamed acpH, encodes an ACP hydrolase that converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP [[cite:PUB00044655]].","domain_architectures":2,"interpro_id":"IPR007431","known_evidence_count":null,"matches":3981,"name":"Acyl carrier protein phosphodiesterase","partial_evidence_count":null,"pfam_id":"PF04336","proteins":3978,"proteomes":3928,"short_name":"ACP_PD","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF04336","structures":0,"taxa":5410,"unknown_status":"EX_DUF"},"inputs":{"cross_mech":"cross-mech-duf-examples-2026-10-10","members":"pfam-uniprot-uniref90-2026-10-07","protein_examples":"duf-protein-examples-2026-10-13","worklist":"interpro-pfam-duf-2026-10-10"},"members":[],"metadata":{"curation_status":"SEEDED","local_source":"source/data/families/PF04336.yaml","record":{"characterization_status":"UNSCORED","counters":{"alphafold_models":2451,"domain_architectures":2,"matches":3981,"proteins":3978,"proteomes":3928,"structures":0,"taxa":5410},"curation_status":"SEEDED","description":"YajB, now renamed acpH, encodes an ACP hydrolase that converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP [[cite:PUB00044655]].","id":"Pfam:PF04336","interpro_id":"InterPro:IPR007431","name":"Acyl carrier protein phosphodiesterase","pfam_id":"PF04336","provenance":{"generated_at":"2026-10-10T07:44:21.614711Z","path":"data/worklists/interpro-pfam-duf-2026-10-10.json","sha256":"17fb625876c9326ed284263a47bcd84e0d7844a31c040dc06cd2260c36f1c383","snapshot_id":"interpro-pfam-duf-2026-10-10","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/"},"seed_status":"EX_DUF","short_name":"ACP_PD","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF04336"},"source":{"commit":"c8155abfcf881ad8662936343deb81e604e3a194","path":"data/families/PF04336.yaml","repository":"https://github.com/CultureBotAI/DUFMech","sha256":"e046e91d37691b0494daf6beea061f8cb543e464be86afd9e967dbdedd5405ff"}},"protein_examples":{"candidate_count":3,"discovery_scanned":true,"example_count":3,"examples":[{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/pfam/acp-pd-pf04336.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF04336","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/pfam/acp-pd-pf04336.yaml"}],"pfam_ids":["PF04336"],"protein_name":"Acyl carrier protein phosphodiesterase","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MNFLAHLHLAHLADSSLPGNLMADFVRGNPQGDYPAEIIDGIYMHRRIDVMTDNLAEVKEAREWFRPQTRRVAPITLDVMWDHFLSQHWAQLSPDLPLDEFVRYAERQIVPILPDSPPRFVNLNQYLWSERWLERYREMDFIQRVLNGMASRRPRLEALRDSWQDLDTHYDRLETQFWRFYPQMMRLAENKQL","sequence_length":193,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"3eec75d198a7f3e28ae9bfe4f335b1efdbba389afc9b57b135c8b866f8970da4","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/A6T5D6.json","taxon_id":"272620","uniprot_accession":"A6T5D6","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Escherichia coli O139:H28 (strain E24377A / ETEC)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/pfam/acp-pd-pf04336.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF04336","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/pfam/acp-pd-pf04336.yaml"}],"pfam_ids":["PF04336"],"protein_name":"Acyl carrier protein phosphodiesterase","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHMHRRIDVLTDNLPEVREAREWFRSETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFVCYAREQVMTILPDSPPRFINLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALRDSWYDLDAHYDALETRFWQFYPRMMAQASHKAL","sequence_length":193,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"dbaccdbdc406395b35865df5e80f7d3b32170e1fb12b0030c8bad87007eb6b79","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/A7ZIF6.json","taxon_id":"331111","uniprot_accession":"A7ZIF6","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Escherichia coli (strain K12)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/function/molecular_function/go/acyl-carrier-protein-phosphodiesterase-activity-go0008770.yaml","qualification_status":"NOT_ASSESSED","record_id":"GO:0008770","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/function/molecular_function/go/acyl-carrier-protein-phosphodiesterase-activity-go0008770.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/function/protein_family/ncbifam/acp-phosphodiesterase-nf007466.yaml","qualification_status":"NOT_ASSESSED","record_id":"NCBIfam:NF007466","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/function/protein_family/ncbifam/acp-phosphodiesterase-nf007466.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/pfam/acp-pd-pf04336.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF04336","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/pfam/acp-pd-pf04336.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["ptm_registry_exact_uniprot_pfam_xref"],"mech":"ProteinTraitsMech","path":"data/grounding/protein_registry.jsonl","qualification_status":"NOT_ASSESSED_FOR_THIS_FAMILY","record_id":"UniProtKB:P21515","section":"protein_registry","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/grounding/protein_registry.jsonl"}],"pfam_ids":["PF04336"],"protein_name":"Acyl carrier protein phosphodiesterase","registry_source":{"commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","path":"data/grounding/protein_registry.jsonl","repository":"https://github.com/CultureBotAI/proteintraitsmech","sequence_sha256":"606c2aadfdb5576da9af7c3127bf055127d063381049f3a548a95a54a4a6d5f8","sequence_version":2,"sha256":"1be0cf02b76b03a8fe9b80bcead9cd4a419157116eb8da038f266bcc33015eb9","uniprot_release":"2026_03","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/grounding/protein_registry.jsonl"},"registry_status":"EXACT_SEQUENCE_VERSION_MATCH","reviewed":true,"sequence":"MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHMHRRIDVLTDNLPEVREAREWFRSETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFVCYAREQVMTILPDSPPRFINLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALRDSWYDLDAHYDALETRFWQFYPRMMAQASRKAL","sequence_length":193,"sequence_origin":"PTM_REGISTRY_MIRROR","sequence_sha256":"606c2aadfdb5576da9af7c3127bf055127d063381049f3a548a95a54a4a6d5f8","sequence_version":2,"source_url":"https://rest.uniprot.org/uniprotkb/P21515.json","taxon_id":"83333","uniprot_accession":"P21515","uniprot_release":"2026_03"}],"pfam_id":"PF04336","short_name":"ACP_PD","status":"HAS_SEQUENCE_EXAMPLE","unresolved":[]}}
