{"cross_mech":[{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF06674","protein_label":"Uncharacterized protein YpfG","reviewed":true,"short_name":"DUF1176","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf1176-pf06674.yaml","source_record_id":"Pfam:PF06674","source_record_label":"Protein of unknown function (DUF1176)","source_section":"canonical_examples","taxon_id":"NCBITaxon:83333","taxon_label":"Escherichia coli (strain K12)","uniprot_accession":"P76559","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":null,"link_basis":["trait_identifier"],"pfam_id":"PF06674","protein_label":"","reviewed":null,"short_name":"DUF1176","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf1176-pf06674.yaml","source_record_id":"Pfam:PF06674","source_record_label":"Protein of unknown function (DUF1176)","source_section":"trait_identifier","taxon_id":"","taxon_label":"","uniprot_accession":"","unknown_status":"UNKNOWN_CANDIDATE"}],"family":{"alphafold_models":938,"candidate_reasons":["short_name_matches_duf","name_says_unknown_function","description_says_unknown_function"],"characterization_status":"","context_evidence_count":null,"cross_mech":{"example_proteins":1,"protein_traits_record":true,"records_by_mech":{"ProteinTraitsMech":1},"scanned":true},"curation_status":"SEEDED","demotion_reasons":[],"description":"This family consists of several hypothetical bacterial proteins of around 340 residues in length. Members of this family contain six highly conserved cysteine residues. The function of this family is unknown.","domain_architectures":6,"interpro_id":"IPR009560","known_evidence_count":null,"matches":1626,"name":"Protein of unknown function (DUF1176)","partial_evidence_count":null,"pfam_id":"PF06674","proteins":1622,"proteomes":1333,"short_name":"DUF1176","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF06674","structures":0,"taxa":2013,"unknown_status":"UNKNOWN_CANDIDATE"},"inputs":{"cross_mech":"cross-mech-duf-examples-2026-10-10","members":"pfam-uniprot-uniref90-2026-10-07","protein_examples":"duf-protein-examples-2026-10-13","worklist":"interpro-pfam-duf-2026-10-10"},"members":[],"metadata":{"curation_status":"SEEDED","local_source":"source/data/families/PF06674.yaml","record":{"characterization_status":"UNSCORED","counters":{"alphafold_models":938,"domain_architectures":6,"matches":1626,"proteins":1622,"proteomes":1333,"structures":0,"taxa":2013},"curation_status":"SEEDED","description":"This family consists of several hypothetical bacterial proteins of around 340 residues in length. Members of this family contain six highly conserved cysteine residues. The function of this family is unknown.","id":"Pfam:PF06674","interpro_id":"InterPro:IPR009560","name":"Protein of unknown function (DUF1176)","pfam_id":"PF06674","provenance":{"generated_at":"2026-10-10T07:44:21.614711Z","path":"data/worklists/interpro-pfam-duf-2026-10-10.json","sha256":"17fb625876c9326ed284263a47bcd84e0d7844a31c040dc06cd2260c36f1c383","snapshot_id":"interpro-pfam-duf-2026-10-10","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/"},"seed_status":"UNKNOWN_CANDIDATE","short_name":"DUF1176","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF06674"},"source":{"commit":"c8155abfcf881ad8662936343deb81e604e3a194","path":"data/families/PF06674.yaml","repository":"https://github.com/CultureBotAI/DUFMech","sha256":"83ecd2ed73507f09dc199f538ff4cc0f16eb0b069e1a42e1526be40536c5f832"}},"protein_examples":{"candidate_count":1,"discovery_scanned":true,"example_count":1,"examples":[{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Escherichia coli (strain K12)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/duf1176-pf06674.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF06674","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/duf1176-pf06674.yaml"}],"pfam_ids":["PF06674"],"protein_name":"Uncharacterized protein YpfG","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVARNTGDHNGLVMTLSRSAGAHTDAVLRIERGGLKSPEASEGEIAPRLLLDGEPLALSGDKWRISPWLLVTDDTATITAFLQMIQEGKAITLRDGDQTISLSGLKAALLFIDAQQKRVGSETAWIKKGDEPPLSVPPAPALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSLDPLRREVNVTALTDDKALMMISCEAGAYNTIDLAWIVSRKKPLASRPVRLRLPFNNGQETNELELMNATFDEKSRELVTLAKGRGLSDCGIQARWRFDGQRFRLVRYAAEPTCDNWHGPDAWPTLWITR","sequence_length":347,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"64fba80dd5d9bcddf56fbfcfe053c827343237f7e7f28d8bcf787f5a1df636f1","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/P76559.json","taxon_id":"83333","uniprot_accession":"P76559","uniprot_release":"2026_03"}],"pfam_id":"PF06674","short_name":"DUF1176","status":"HAS_SEQUENCE_EXAMPLE","unresolved":[]}}