{"cross_mech":[],"family":{"alphafold_models":3983,"candidate_reasons":["pfam_previous_unknown_name"],"characterization_status":"","context_evidence_count":null,"cross_mech":{"example_proteins":0,"protein_traits_record":false,"records_by_mech":{},"scanned":false},"curation_status":"SEEDED","demotion_reasons":[],"description":"This entry includes Arabidopsis Glycine-rich domain- containing protein 1 and 2 (GRDP1/2). They are involved in development and stress responses [[cite:PUB00077560]].","domain_architectures":100,"interpro_id":"IPR009836","known_evidence_count":null,"matches":5190,"name":"Glycine-rich domain-containing protein-like","partial_evidence_count":null,"pfam_id":"PF07173","proteins":4904,"proteomes":1704,"short_name":"GRDP-like","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF07173","structures":0,"taxa":4156,"unknown_status":"EX_DUF"},"inputs":{"cross_mech":"cross-mech-duf-examples-2026-10-10","members":"pfam-uniprot-uniref90-2026-10-07","protein_examples":"duf-protein-examples-2026-10-13","worklist":"interpro-pfam-duf-2026-10-10"},"members":[],"metadata":{"curation_status":"SEEDED","local_source":"source/data/families/PF07173.yaml","record":{"characterization_status":"UNSCORED","counters":{"alphafold_models":3983,"domain_architectures":100,"matches":5190,"proteins":4904,"proteomes":1704,"structures":0,"taxa":4156},"curation_status":"SEEDED","description":"This entry includes Arabidopsis Glycine-rich domain- containing protein 1 and 2 (GRDP1/2). They are involved in development and stress responses [[cite:PUB00077560]].","id":"Pfam:PF07173","interpro_id":"InterPro:IPR009836","name":"Glycine-rich domain-containing protein-like","pfam_id":"PF07173","provenance":{"generated_at":"2026-10-10T07:44:21.614711Z","path":"data/worklists/interpro-pfam-duf-2026-10-10.json","sha256":"17fb625876c9326ed284263a47bcd84e0d7844a31c040dc06cd2260c36f1c383","snapshot_id":"interpro-pfam-duf-2026-10-10","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/"},"seed_status":"EX_DUF","short_name":"GRDP-like","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF07173"},"source":{"commit":"c8155abfcf881ad8662936343deb81e604e3a194","path":"data/families/PF07173.yaml","repository":"https://github.com/CultureBotAI/DUFMech","sha256":"2619c9c95e76f645fbd033808f8439d31bb92e610bd292d69d601890f8397bee"}},"protein_examples":{"candidate_count":2,"discovery_scanned":true,"example_count":2,"examples":[{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Arabidopsis thaliana","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/interpro/grdp-c2-domain-ipr057458.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR057458","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/interpro/grdp-c2-domain-ipr057458.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/interpro/grdp1-2-domain-ipr009836.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR009836","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/interpro/grdp1-2-domain-ipr009836.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/interpro/grpd-c-terminal-domain-ipr057518.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR057518","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/interpro/grpd-c-terminal-domain-ipr057518.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/pfam/c2-grdp-pf25334.yaml","qualification_status":"NOT_ASSESSED","record_id":"Pfam:PF25334","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/pfam/c2-grdp-pf25334.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/pfam/grdp-c-pf25335.yaml","qualification_status":"NOT_ASSESSED","record_id":"Pfam:PF25335","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/pfam/grdp-c-pf25335.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/grdp-like-pf07173.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF07173","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/grdp-like-pf07173.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["ptm_registry_exact_uniprot_pfam_xref"],"mech":"ProteinTraitsMech","path":"data/grounding/protein_registry.jsonl","qualification_status":"NOT_ASSESSED_FOR_THIS_FAMILY","record_id":"UniProtKB:Q9SZJ2","section":"protein_registry","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/grounding/protein_registry.jsonl"}],"pfam_ids":["PF07173","PF25334","PF25335"],"protein_name":"Glycine-rich domain-containing protein 2","registry_source":{"commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","path":"data/grounding/protein_registry.jsonl","repository":"https://github.com/CultureBotAI/proteintraitsmech","sequence_sha256":"d156cfd6b00451cbf4ec18ba50395104af0d1713680f13a186e5a0ad93ac0cef","sequence_version":1,"sha256":"1be0cf02b76b03a8fe9b80bcead9cd4a419157116eb8da038f266bcc33015eb9","uniprot_release":"2026_03","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/grounding/protein_registry.jsonl"},"registry_status":"EXACT_SEQUENCE_VERSION_MATCH","reviewed":true,"sequence":"MDKEKEQTLEWNEAQKIDISVDLLAAAKKHLLFLGAVDRNRCLYDGPALQRAIYRYNAYWLPLLAQYTESSSICQGPLVPPLDCEWVWHCHRLNPVRYKTDCEQFYGRVLDNSGVVSSVNGNCKSQTETLWKRLYPTEPYDLDFANAISEPADVSALEKCTTYDLVLAVKRQSPFFYQVSRAHVDNDVFLQEAVARYKAFLYLIKGNRERSIKLFCVPTYDIDLIWHTHQLHAISYCNDLTKMIGKVLEHDDTDSDRSKGKKLDTGFSGTTAQWEETFGRRYWKAGAMNRGNTPKPVTTSPYVCSGKKSIAKEEESQNVIQYPEVKVIEVILEIVGVKNLPDAHKGKVFVLFSKTQPDSLFNAERRLTVLSESCGEKQVALFQCEPTGELSFQLMSSKSKSLGFTSLSFSEFLSPVTKLSVEKWLELTPTKRGKADDPNPISLRVAVSFTPPTRSPTVLHLVQARPSLKGSCFLPMLRKVRLAKSFTRVVDETETEVINLQMRNSNDAAPKGDRRQVIGVKECGETYVLAEYDGTFWSLLDSKWSLKQTCNPATDGPLFELSGTRMVKVYSGRKLEYEPKHCSKLRSEQDFMTAVEFSKQHPYGKAVGLLDLKFGSIEANEKWLVLPGMVSSFILSDLLKKEGFSAAAKDTVKANGITEESTEIDVLSQEKLEEETMMDVDTTTPVAVAAEKINGGARCFSKELSGNMIEEEGGHCGGCGGCGGCGGGGGCGGGGRCGGMTKIEGCGGGSCTGGSTGCGNCGGGCGNMMKNNANGNAPSVENDAVTA","sequence_length":787,"sequence_origin":"PTM_REGISTRY_MIRROR","sequence_sha256":"d156cfd6b00451cbf4ec18ba50395104af0d1713680f13a186e5a0ad93ac0cef","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/Q9SZJ2.json","taxon_id":"3702","uniprot_accession":"Q9SZJ2","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Arabidopsis thaliana","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/interpro/grdp-c2-domain-ipr057458.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR057458","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/interpro/grdp-c2-domain-ipr057458.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/interpro/grdp1-2-domain-ipr009836.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR009836","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/interpro/grdp1-2-domain-ipr009836.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/interpro/grpd-c-terminal-domain-ipr057518.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR057518","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/interpro/grpd-c-terminal-domain-ipr057518.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/pfam/c2-grdp-pf25334.yaml","qualification_status":"NOT_ASSESSED","record_id":"Pfam:PF25334","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/pfam/c2-grdp-pf25334.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/pfam/grdp-c-pf25335.yaml","qualification_status":"NOT_ASSESSED","record_id":"Pfam:PF25335","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/pfam/grdp-c-pf25335.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/grdp-like-pf07173.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF07173","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/grdp-like-pf07173.yaml"}],"pfam_ids":["PF07173","PF25334","PF25335"],"protein_name":"Glycine-rich domain-containing protein 1","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MDKEKDHEVEWLEAQKIEISVDLLAAAKQHLLFLETVDRNRWLYDGPALEKAIYRYNACWLPLLVKYSESSSVSEGSLVPPLDCEWIWHCHRLNPVRYNSDCEQFYGRVLDNSGVLSSVDGNCKLKTEDLWKRLYPDEPYELDLDNIDLEDISEKSSALEKCTKYDLVSAVKRQSPFYYQVSRSHVNSDIFLQEAVARYKGFLYLIKMNRERSLKRFCVPTYDVDLIWHTHQLHPVSYCDDMVKLIGKVLEHDDTDSDRGKGKKLDTGFSKTTAQWEETFGTRYWKAGAMHRGKTPVPVTNSPYASDVLVKDPTAKDDFQNLIQFPEVEVVEVLLEIIGVRNLPDGHKGKVSVMFSKTQPDSLFNAERRLTILSEVGEKQVATFQCEPTGELVFKLISCSPSKIPVSREPKNLGFASLSLKEFLFPVITQLSVEKWLELTPSKGSQTDTKPISLRVAVSFTPPVRSPSVLHMVQSRPSCKGSCFFPIIGKSRLAKSSTHIVDETQTEVITLQIRNSADGGILKDDQRQVMGVTDSGETRVLAVYTGSFWSLLDSKWSLKQINASTADNPLFEILGPRVVKIFSGRKLDYEPKHCANLRSDLDFMTLVEFSKQHPYGKTVGLVDMRFGSIEAKENWLLLPGIVSAFILHTVLKKGGSEGFNVTTKDIKEESKQTKLVAATENNVNANSTNVETQTAITAPKKGSGCGGGCSGECGNMVKAANASGCGSSCSGECGDMVKSAANASGCGSGCSGECGNMVKAANASGGGYGARCKAAKASGCGGGCGGGCGGGCGDMVKSVNASGCGGGCNGECGNMVKAA","sequence_length":819,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"a042ea87ba53a5d38394c5582cfef64889aaf653e14af9d579cf2d10752d3e16","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/Q9ZQ47.json","taxon_id":"3702","uniprot_accession":"Q9ZQ47","uniprot_release":"2026_03"}],"pfam_id":"PF07173","short_name":"GRDP-like","status":"HAS_SEQUENCE_EXAMPLE","unresolved":[]}}
