{"cross_mech":[{"cited_uniprot_accession":"","family_mentioned_in_record":null,"link_basis":["trait_identifier"],"pfam_id":"PF09248","protein_label":"","reviewed":null,"short_name":"DUF1965","source_category":"sequence/domain/interpro","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/domain/interpro/domain-of-unknown-function-duf1965-ipr015328.yaml","source_record_id":"InterPro:IPR015328","source_record_label":"Domain of unknown function DUF1965","source_section":"trait_identifier","taxon_id":"","taxon_label":"","uniprot_accession":"","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF09248","protein_label":"Copper amine oxidase vicK1","reviewed":true,"short_name":"DUF1965","source_category":"sequence/domain/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/domain/pfam/duf1965-pf09248.yaml","source_record_id":"Pfam:PF09248","source_record_label":"Domain of unknown function (DUF1965)","source_section":"canonical_examples","taxon_id":"NCBITaxon:930091","taxon_label":"Bipolaris victoriae (strain FI3)","uniprot_accession":"W7E8S5","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":null,"link_basis":["trait_identifier"],"pfam_id":"PF09248","protein_label":"","reviewed":null,"short_name":"DUF1965","source_category":"sequence/domain/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/domain/pfam/duf1965-pf09248.yaml","source_record_id":"Pfam:PF09248","source_record_label":"Domain of unknown function (DUF1965)","source_section":"trait_identifier","taxon_id":"","taxon_label":"","uniprot_accession":"","unknown_status":"UNKNOWN_CANDIDATE"}],"family":{"alphafold_models":1051,"candidate_reasons":["short_name_matches_duf","name_says_unknown_function","domain_of_unknown_function"],"characterization_status":"","context_evidence_count":null,"cross_mech":{"example_proteins":1,"protein_traits_record":true,"records_by_mech":{"ProteinTraitsMech":1},"scanned":true},"curation_status":"SEEDED","demotion_reasons":[],"description":"Members of this family of fungal domains adopt a structure that consists of an alpha/beta motif. Their exact function has not, as yet, been determined [[cite:PUB00027613]].","domain_architectures":28,"interpro_id":"IPR015328","known_evidence_count":null,"matches":1300,"name":"Domain of unknown function (DUF1965)","partial_evidence_count":null,"pfam_id":"PF09248","proteins":1300,"proteomes":815,"short_name":"DUF1965","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF09248","structures":4,"taxa":2003,"unknown_status":"UNKNOWN_CANDIDATE"},"inputs":{"cross_mech":"cross-mech-duf-examples-2026-10-10","members":"pfam-uniprot-uniref90-2026-10-07","protein_examples":"duf-protein-examples-2026-10-13","worklist":"interpro-pfam-duf-2026-10-10"},"members":[],"metadata":{"curation_status":"SEEDED","local_source":"source/data/families/PF09248.yaml","record":{"characterization_status":"UNSCORED","counters":{"alphafold_models":1051,"domain_architectures":28,"matches":1300,"proteins":1300,"proteomes":815,"structures":4,"taxa":2003},"curation_status":"SEEDED","description":"Members of this family of fungal domains adopt a structure that consists of an alpha/beta motif. Their exact function has not, as yet, been determined [[cite:PUB00027613]].","id":"Pfam:PF09248","interpro_id":"InterPro:IPR015328","name":"Domain of unknown function (DUF1965)","pfam_id":"PF09248","provenance":{"generated_at":"2026-10-10T07:44:21.614711Z","path":"data/worklists/interpro-pfam-duf-2026-10-10.json","sha256":"17fb625876c9326ed284263a47bcd84e0d7844a31c040dc06cd2260c36f1c383","snapshot_id":"interpro-pfam-duf-2026-10-10","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/"},"seed_status":"UNKNOWN_CANDIDATE","short_name":"DUF1965","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF09248"},"source":{"commit":"c8155abfcf881ad8662936343deb81e604e3a194","path":"data/families/PF09248.yaml","repository":"https://github.com/CultureBotAI/DUFMech","sha256":"859a426b60baf1935e63b7a3b62bff321220ad88236d47f6a63a6b0927914e33"}},"protein_examples":{"candidate_count":1,"discovery_scanned":true,"example_count":1,"examples":[{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Bipolaris victoriae (strain FI3)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/pfam/duf1965-pf09248.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF09248","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/pfam/duf1965-pf09248.yaml"}],"pfam_ids":["PF01179","PF02727","PF09248"],"protein_name":"Copper amine oxidase vicK1","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MKLFLLFTLTLVNIFSVSLQEPIQNQPAGNNTITSPHRNVWRALSEAEFSGVSAVLVHQLNLTTSRGGNRIIQIDYLYPNKSDVLLFLDHNGEEPKRYARATVQFGSPEVPYLQEYRIGPLPATNTTAVEPLRFPFNGKVQGKTKITSLDADGIDAFLPQLSSVVEDITRKLWNTTLAEGGVSFNLGKASFNSDSTQTIWLGFLNNATTGFDSSTLLPLGVSMQLDITSRDYNDWFVLYWFYNNKLYTPTSFNETVYSSDFQPPLANIDGPWTSTNKQEPTFLLDDLPPPKAISRGKNRYNLDTEENYVQWMDFSFYFSSHTDRGLSLFNVVYKSKRIIYELSLQEALAHYAGVEPVPSEAVYFDTQTGMGRSMISLIKGYDCPDYATYLNSSFSSRTGVTITPDAICLFESDSQFPLRRHTSQAFGYASAARNVVFTVRWIATVGNYDYLFDYDFFYDGAIEVKVRASGYIQGAYYAGNEEYGFKIHDALSGSMHDHVMTFKADLDIYGEKNSVQKVEVVPETTIYPWSQGQPHNTMKLNRGFVTSETDSSIDWAADDAISYTIVNKDSPNKYGEYPGYRFRRVAPAIHLTVKNSTSGGKALHYATHDLFITQQKDNEPCAADRNNAYNIDDPLVDFEKFLDGESLEQEDLVLWINMGMHHTPHTEDLPNTIMTSAYSGIRFEPFNYLESGDPSVKSAQQARIILSNS","sequence_length":709,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"0a5e98bd5451dd1df8692bfba4c2b37115415d8028b9f08f97f000e0cbd88d54","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/W7E8S5.json","taxon_id":"930091","uniprot_accession":"W7E8S5","uniprot_release":"2026_03"}],"pfam_id":"PF09248","short_name":"DUF1965","status":"HAS_SEQUENCE_EXAMPLE","unresolved":[]}}
