{"cross_mech":[{"cited_uniprot_accession":"","family_mentioned_in_record":false,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF09853","protein_label":"Uncharacterized protein MJ0362","reviewed":true,"short_name":"DUF2080","source_category":"function/protein_family/ncbifam","source_mech":"ProteinTraitsMech","source_path":"data/traits/function/protein_family/ncbifam/duf2080-family-transposase-associated-protein-nf033496.yaml","source_record_id":"NCBIfam:NF033496","source_record_label":"DUF2080 family transposase-associated protein","source_section":"canonical_examples","taxon_id":"NCBITaxon:243232","taxon_label":"Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)","uniprot_accession":"Q57808","unknown_status":"KNOWN_HISTORICAL_DUF"},{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF09853","protein_label":"Uncharacterized protein MJ0362","reviewed":true,"short_name":"DUF2080","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf2080-pf09853.yaml","source_record_id":"Pfam:PF09853","source_record_label":"Putative transposon-encoded protein (DUF2080)","source_section":"canonical_examples","taxon_id":"NCBITaxon:243232","taxon_label":"Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)","uniprot_accession":"Q57808","unknown_status":"KNOWN_HISTORICAL_DUF"},{"cited_uniprot_accession":"","family_mentioned_in_record":null,"link_basis":["trait_identifier"],"pfam_id":"PF09853","protein_label":"","reviewed":null,"short_name":"DUF2080","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf2080-pf09853.yaml","source_record_id":"Pfam:PF09853","source_record_label":"Putative transposon-encoded protein (DUF2080)","source_section":"trait_identifier","taxon_id":"","taxon_label":"","uniprot_accession":"","unknown_status":"KNOWN_HISTORICAL_DUF"}],"family":{"alphafold_models":180,"candidate_reasons":["short_name_matches_duf"],"characterization_status":"","context_evidence_count":null,"cross_mech":{"example_proteins":1,"protein_traits_record":true,"records_by_mech":{"ProteinTraitsMech":2},"scanned":true},"curation_status":"SEEDED","demotion_reasons":[],"description":"This domain, found in various hypothetical archaeal proteins, has no known function.","domain_architectures":1,"interpro_id":"IPR019205","known_evidence_count":null,"matches":194,"name":"Putative transposon-encoded protein (DUF2080)","partial_evidence_count":null,"pfam_id":"PF09853","proteins":194,"proteomes":131,"short_name":"DUF2080","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF09853","structures":0,"taxa":322,"unknown_status":"KNOWN_HISTORICAL_DUF"},"inputs":{"cross_mech":"cross-mech-duf-examples-2026-10-10","members":"pfam-uniprot-uniref90-2026-10-07","protein_examples":"duf-protein-examples-2026-10-13","worklist":"interpro-pfam-duf-2026-10-10"},"members":[],"metadata":{"curation_status":"SEEDED","local_source":"source/data/families/PF09853.yaml","record":{"characterization_status":"UNSCORED","counters":{"alphafold_models":180,"domain_architectures":1,"matches":194,"proteins":194,"proteomes":131,"structures":0,"taxa":322},"curation_status":"SEEDED","description":"This domain, found in various hypothetical archaeal proteins, has no known function.","id":"Pfam:PF09853","interpro_id":"InterPro:IPR019205","name":"Putative transposon-encoded protein (DUF2080)","pfam_id":"PF09853","provenance":{"generated_at":"2026-10-10T07:44:21.614711Z","path":"data/worklists/interpro-pfam-duf-2026-10-10.json","sha256":"17fb625876c9326ed284263a47bcd84e0d7844a31c040dc06cd2260c36f1c383","snapshot_id":"interpro-pfam-duf-2026-10-10","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/"},"seed_status":"KNOWN_HISTORICAL_DUF","short_name":"DUF2080","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF09853"},"source":{"commit":"c8155abfcf881ad8662936343deb81e604e3a194","path":"data/families/PF09853.yaml","repository":"https://github.com/CultureBotAI/DUFMech","sha256":"386a3cdcab43c54014487c9441a1af27464ff96977064f0e2b6ba1660a3a83d4"}},"protein_examples":{"candidate_count":1,"discovery_scanned":true,"example_count":1,"examples":[{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/function/protein_family/ncbifam/duf2080-family-transposase-associated-protein-nf033496.yaml","qualification_status":"NOT_ASSESSED","record_id":"NCBIfam:NF033496","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/function/protein_family/ncbifam/duf2080-family-transposase-associated-protein-nf033496.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/duf2080-pf09853.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF09853","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/duf2080-pf09853.yaml"}],"pfam_ids":["PF09853"],"protein_name":"Uncharacterized protein MJ0362","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MKIRKKTWRLPKDATISFKGVVKPIGNSGMILIPKDYVGCKVLVTILDELGNEEFEIVETEKS","sequence_length":63,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"5f557fbe85d0f8e30572060c764790363663d8c9d677db10fceb55a8b0619ecf","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/Q57808.json","taxon_id":"243232","uniprot_accession":"Q57808","uniprot_release":"2026_03"}],"pfam_id":"PF09853","short_name":"DUF2080","status":"HAS_SEQUENCE_EXAMPLE","unresolved":[]}}
