{"cross_mech":[{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF09926","protein_label":"Uncharacterized protein YodC","reviewed":true,"short_name":"DUF2158","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf2158-pf09926.yaml","source_record_id":"Pfam:PF09926","source_record_label":"Uncharacterized small protein (DUF2158)","source_section":"canonical_examples","taxon_id":"NCBITaxon:83333","taxon_label":"Escherichia coli (strain K12)","uniprot_accession":"P64517","unknown_status":"KNOWN_HISTORICAL_DUF"},{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF09926","protein_label":"Uncharacterized protein YodC","reviewed":true,"short_name":"DUF2158","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf2158-pf09926.yaml","source_record_id":"Pfam:PF09926","source_record_label":"Uncharacterized small protein (DUF2158)","source_section":"canonical_examples","taxon_id":"NCBITaxon:83334","taxon_label":"Escherichia coli O157:H7","uniprot_accession":"P64518","unknown_status":"KNOWN_HISTORICAL_DUF"},{"cited_uniprot_accession":"","family_mentioned_in_record":null,"link_basis":["trait_identifier"],"pfam_id":"PF09926","protein_label":"","reviewed":null,"short_name":"DUF2158","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf2158-pf09926.yaml","source_record_id":"Pfam:PF09926","source_record_label":"Uncharacterized small protein (DUF2158)","source_section":"trait_identifier","taxon_id":"","taxon_label":"","uniprot_accession":"","unknown_status":"KNOWN_HISTORICAL_DUF"}],"family":{"alphafold_models":622,"candidate_reasons":["short_name_matches_duf"],"characterization_status":"","context_evidence_count":null,"cross_mech":{"example_proteins":2,"protein_traits_record":true,"records_by_mech":{"ProteinTraitsMech":1},"scanned":true},"curation_status":"SEEDED","demotion_reasons":[],"description":"Members of this family of prokaryotic proteins have no known function.","domain_architectures":5,"interpro_id":"IPR019226","known_evidence_count":null,"matches":980,"name":"Uncharacterized small protein (DUF2158)","partial_evidence_count":null,"pfam_id":"PF09926","proteins":979,"proteomes":858,"short_name":"DUF2158","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF09926","structures":0,"taxa":1457,"unknown_status":"KNOWN_HISTORICAL_DUF"},"inputs":{"cross_mech":"cross-mech-duf-examples-2026-10-10","members":"pfam-uniprot-uniref90-2026-10-07","protein_examples":"duf-protein-examples-2026-10-13","worklist":"interpro-pfam-duf-2026-10-10"},"members":[],"metadata":{"curation_status":"SEEDED","local_source":"source/data/families/PF09926.yaml","record":{"characterization_status":"UNSCORED","counters":{"alphafold_models":622,"domain_architectures":5,"matches":980,"proteins":979,"proteomes":858,"structures":0,"taxa":1457},"curation_status":"SEEDED","description":"Members of this family of prokaryotic proteins have no known function.","id":"Pfam:PF09926","interpro_id":"InterPro:IPR019226","name":"Uncharacterized small protein (DUF2158)","pfam_id":"PF09926","provenance":{"generated_at":"2026-10-10T07:44:21.614711Z","path":"data/worklists/interpro-pfam-duf-2026-10-10.json","sha256":"17fb625876c9326ed284263a47bcd84e0d7844a31c040dc06cd2260c36f1c383","snapshot_id":"interpro-pfam-duf-2026-10-10","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/"},"seed_status":"KNOWN_HISTORICAL_DUF","short_name":"DUF2158","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF09926"},"source":{"commit":"c8155abfcf881ad8662936343deb81e604e3a194","path":"data/families/PF09926.yaml","repository":"https://github.com/CultureBotAI/DUFMech","sha256":"a9e6300d8d6eec3dca60ecedbcea2a7516fd3b0b71bb0058009112cc0b2fb276"}},"protein_examples":{"candidate_count":2,"discovery_scanned":true,"example_count":2,"examples":[{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Escherichia coli (strain K12)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/duf2158-pf09926.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF09926","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/duf2158-pf09926.yaml"}],"pfam_ids":["PF09926"],"protein_name":"Uncharacterized protein YodC","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFHETELVPGEGSRSAEEV","sequence_length":60,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"d6e4beb6f16e32c4204889960c25cb774922c6ae518ff022faed729c19d0600b","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/P64517.json","taxon_id":"83333","uniprot_accession":"P64517","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Escherichia coli O157:H7","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/duf2158-pf09926.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF09926","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/duf2158-pf09926.yaml"}],"pfam_ids":["PF09926"],"protein_name":"Uncharacterized protein YodC","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFHETELVPGEGSRSAEEV","sequence_length":60,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"d6e4beb6f16e32c4204889960c25cb774922c6ae518ff022faed729c19d0600b","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/P64518.json","taxon_id":"83334","uniprot_accession":"P64518","uniprot_release":"2026_03"}],"pfam_id":"PF09926","short_name":"DUF2158","status":"HAS_SEQUENCE_EXAMPLE","unresolved":[]}}
