{"cross_mech":[{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF10915","protein_label":"Uncharacterized protein CT_538","reviewed":true,"short_name":"DUF2709","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf2709-pf10915.yaml","source_record_id":"Pfam:PF10915","source_record_label":"Protein of unknown function (DUF2709)","source_section":"canonical_examples","taxon_id":"NCBITaxon:272561","taxon_label":"Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)","uniprot_accession":"O84543","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF10915","protein_label":"Uncharacterized protein TC_0825","reviewed":true,"short_name":"DUF2709","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf2709-pf10915.yaml","source_record_id":"Pfam:PF10915","source_record_label":"Protein of unknown function (DUF2709)","source_section":"canonical_examples","taxon_id":"NCBITaxon:243161","taxon_label":"Chlamydia muridarum (strain MoPn / Nigg)","uniprot_accession":"Q9PJK4","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF10915","protein_label":"Protein CPn_0658/CP_0089/CPj0658/CpB0684","reviewed":true,"short_name":"DUF2709","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf2709-pf10915.yaml","source_record_id":"Pfam:PF10915","source_record_label":"Protein of unknown function (DUF2709)","source_section":"canonical_examples","taxon_id":"NCBITaxon:83558","taxon_label":"Chlamydia pneumoniae","uniprot_accession":"Q9Z7P6","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":null,"link_basis":["trait_identifier"],"pfam_id":"PF10915","protein_label":"","reviewed":null,"short_name":"DUF2709","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf2709-pf10915.yaml","source_record_id":"Pfam:PF10915","source_record_label":"Protein of unknown function (DUF2709)","source_section":"trait_identifier","taxon_id":"","taxon_label":"","uniprot_accession":"","unknown_status":"UNKNOWN_CANDIDATE"}],"family":{"alphafold_models":21,"candidate_reasons":["short_name_matches_duf","name_says_unknown_function"],"characterization_status":"","context_evidence_count":null,"cross_mech":{"example_proteins":3,"protein_traits_record":true,"records_by_mech":{"ProteinTraitsMech":1},"scanned":true},"curation_status":"SEEDED","demotion_reasons":[],"description":"This bacterial family of proteins has no known function.","domain_architectures":1,"interpro_id":"IPR024484","known_evidence_count":null,"matches":32,"name":"Protein of unknown function (DUF2709)","partial_evidence_count":null,"pfam_id":"PF10915","proteins":32,"proteomes":31,"short_name":"DUF2709","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF10915","structures":0,"taxa":72,"unknown_status":"UNKNOWN_CANDIDATE"},"inputs":{"cross_mech":"cross-mech-duf-examples-2026-10-10","members":"pfam-uniprot-uniref90-2026-10-07","protein_examples":"duf-protein-examples-2026-10-13","worklist":"interpro-pfam-duf-2026-10-10"},"members":[],"metadata":{"curation_status":"SEEDED","local_source":"source/data/families/PF10915.yaml","record":{"characterization_status":"UNSCORED","counters":{"alphafold_models":21,"domain_architectures":1,"matches":32,"proteins":32,"proteomes":31,"structures":0,"taxa":72},"curation_status":"SEEDED","description":"This bacterial family of proteins has no known function.","id":"Pfam:PF10915","interpro_id":"InterPro:IPR024484","name":"Protein of unknown function (DUF2709)","pfam_id":"PF10915","provenance":{"generated_at":"2026-10-10T07:44:21.614711Z","path":"data/worklists/interpro-pfam-duf-2026-10-10.json","sha256":"17fb625876c9326ed284263a47bcd84e0d7844a31c040dc06cd2260c36f1c383","snapshot_id":"interpro-pfam-duf-2026-10-10","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/"},"seed_status":"UNKNOWN_CANDIDATE","short_name":"DUF2709","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF10915"},"source":{"commit":"c8155abfcf881ad8662936343deb81e604e3a194","path":"data/families/PF10915.yaml","repository":"https://github.com/CultureBotAI/DUFMech","sha256":"ea474d8e381eca150f98a3277c052323ed2d6b5727ad66b709519c21d36f6cfe"}},"protein_examples":{"candidate_count":3,"discovery_scanned":true,"example_count":3,"examples":[{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/duf2709-pf10915.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF10915","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/duf2709-pf10915.yaml"}],"pfam_ids":["PF10915"],"protein_name":"Uncharacterized protein CT_538","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MNISGSIKQKLLQFLKKQKSPELLATYLFYLEQSLHLSPVVFVRDKIIFKSAEDAIQLLEADKKIWRETEIQISSGKPEVNEQTKRIYICPFTGKVFADNVYANPQDAIYDWLSSCPQNRERQSGVAVKRFLVSDDPEVIRAYIVPPKEPIIKTVYASAVTGKLFHSLPTLLEDFKTSYLRPMTLEEVQNQNKFQLESSFLTLLQDALEEEKIAEFVESLADDTAFHKYISQWVDTEE","sequence_length":238,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"062f39029361aec38b24b81fa1982a66ce7d5fedaa424a03af643d0cabbc6fd1","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/O84543.json","taxon_id":"272561","uniprot_accession":"O84543","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Chlamydia muridarum (strain MoPn / Nigg)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/duf2709-pf10915.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF10915","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/duf2709-pf10915.yaml"}],"pfam_ids":["PF10915"],"protein_name":"Uncharacterized protein TC_0825","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MNISGSIKQKLLQFLKKQKSPELLATYLFYLEQSLHLSPVVFVRDKVIFKSAEDAIALLEADKKIWRETEIQISSGKPEVNEQTKRIYICPFTGKVFADNVYANPLDAVYDWLSSCPQNKERQAGVAVKRFLVSDDPEVIRAYIVPPKEPLIKTVYASAITGKLFHSLPTLLEDFKTSYLRPMTLEEVQNQNKFQLESSFLTLLQDALEEEKIAEFVESLADDTAFHEYISQWVDTEE","sequence_length":238,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"fa48e6620049f90221e7ee79e2544c090d894fabd6a6ed30756b922f79422758","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/Q9PJK4.json","taxon_id":"243161","uniprot_accession":"Q9PJK4","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Chlamydia pneumoniae","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/duf2709-pf10915.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF10915","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/duf2709-pf10915.yaml"}],"pfam_ids":["PF10915"],"protein_name":"Protein CPn_0658/CP_0089/CPj0658/CpB0684","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MDISGAVKQKLLQFLGKQKKPELLATYLFYLEQALSLRPVVFVRDKIIFKTPEDAVRILEQDKKIWRETEIQISSEKPQVNENTKRIYICPFTGKVFADNVYANPQDAIYDWLSSCPQNMEKQGGVRIKRFLVSEDPDVIKEYAVPPKEPIIKTVFASAITGKLFHSLPPLLEDFISSYLRPMTLEEVQNQTKFQLESSFLSLLQDALVEDKIAAFIESLADDTAFHVYISQWVDTEE","sequence_length":238,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"71653166f34a698ea7e5e635ee3f55faac6ff169be372729d4758196b304ad58","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/Q9Z7P6.json","taxon_id":"83558","uniprot_accession":"Q9Z7P6","uniprot_release":"2026_03"}],"pfam_id":"PF10915","short_name":"DUF2709","status":"HAS_SEQUENCE_EXAMPLE","unresolved":[]}}
