{"cross_mech":[{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF11021","protein_label":"Putative secreted protein Mb0242c","reviewed":true,"short_name":"DUF2613","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf2613-pf11021.yaml","source_record_id":"Pfam:PF11021","source_record_label":"Protein of unknown function (DUF2613)","source_section":"canonical_examples","taxon_id":"NCBITaxon:233413","taxon_label":"Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)","uniprot_accession":"P0A5C6","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF11021","protein_label":"Putative secreted protein Rv0236A","reviewed":true,"short_name":"DUF2613","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf2613-pf11021.yaml","source_record_id":"Pfam:PF11021","source_record_label":"Protein of unknown function (DUF2613)","source_section":"canonical_examples","taxon_id":"NCBITaxon:83332","taxon_label":"Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)","uniprot_accession":"P9WLB1","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF11021","protein_label":"Putative secreted protein ML2569.1","reviewed":true,"short_name":"DUF2613","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf2613-pf11021.yaml","source_record_id":"Pfam:PF11021","source_record_label":"Protein of unknown function (DUF2613)","source_section":"canonical_examples","taxon_id":"NCBITaxon:272631","taxon_label":"Mycobacterium leprae (strain TN)","uniprot_accession":"Q9CD20","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":null,"link_basis":["trait_identifier"],"pfam_id":"PF11021","protein_label":"","reviewed":null,"short_name":"DUF2613","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf2613-pf11021.yaml","source_record_id":"Pfam:PF11021","source_record_label":"Protein of unknown function (DUF2613)","source_section":"trait_identifier","taxon_id":"","taxon_label":"","uniprot_accession":"","unknown_status":"UNKNOWN_CANDIDATE"}],"family":{"alphafold_models":480,"candidate_reasons":["short_name_matches_duf","name_says_unknown_function"],"characterization_status":"","context_evidence_count":null,"cross_mech":{"example_proteins":3,"protein_traits_record":true,"records_by_mech":{"ProteinTraitsMech":1},"scanned":true},"curation_status":"SEEDED","demotion_reasons":[],"description":"This is a family of putative small secreted proteins expressed by Actinobacteria. The function is not known.","domain_architectures":5,"interpro_id":"IPR022566","known_evidence_count":null,"matches":718,"name":"Protein of unknown function (DUF2613)","partial_evidence_count":null,"pfam_id":"PF11021","proteins":718,"proteomes":645,"short_name":"DUF2613","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF11021","structures":0,"taxa":847,"unknown_status":"UNKNOWN_CANDIDATE"},"inputs":{"cross_mech":"cross-mech-duf-examples-2026-10-10","members":"pfam-uniprot-uniref90-2026-10-07","protein_examples":"duf-protein-examples-2026-10-13","worklist":"interpro-pfam-duf-2026-10-10"},"members":[],"metadata":{"curation_status":"SEEDED","local_source":"source/data/families/PF11021.yaml","record":{"characterization_status":"UNSCORED","counters":{"alphafold_models":480,"domain_architectures":5,"matches":718,"proteins":718,"proteomes":645,"structures":0,"taxa":847},"curation_status":"SEEDED","description":"This is a family of putative small secreted proteins expressed by Actinobacteria. The function is not known.","id":"Pfam:PF11021","interpro_id":"InterPro:IPR022566","name":"Protein of unknown function (DUF2613)","pfam_id":"PF11021","provenance":{"generated_at":"2026-10-10T07:44:21.614711Z","path":"data/worklists/interpro-pfam-duf-2026-10-10.json","sha256":"17fb625876c9326ed284263a47bcd84e0d7844a31c040dc06cd2260c36f1c383","snapshot_id":"interpro-pfam-duf-2026-10-10","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/"},"seed_status":"UNKNOWN_CANDIDATE","short_name":"DUF2613","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF11021"},"source":{"commit":"c8155abfcf881ad8662936343deb81e604e3a194","path":"data/families/PF11021.yaml","repository":"https://github.com/CultureBotAI/DUFMech","sha256":"8569068b6d89899d6f943fc5129cbca4e4564b5f59eeb2441e35365d89b2fc9a"}},"protein_examples":{"candidate_count":3,"discovery_scanned":true,"example_count":3,"examples":[{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/duf2613-pf11021.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF11021","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/duf2613-pf11021.yaml"}],"pfam_ids":["PF11021"],"protein_name":"Putative secreted protein Mb0242c","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MNRIVAPAAASVVVGLLLGAAAIFGVTLMVQQDKKPPLPGGDPSSSVLNRVEYGNRS","sequence_length":57,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"3306b1a7bcbb3fd9b12171b7e1cf4e22141cf463ac39f6342ed18a642695082e","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/P0A5C6.json","taxon_id":"233413","uniprot_accession":"P0A5C6","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/duf2613-pf11021.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF11021","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/duf2613-pf11021.yaml"}],"pfam_ids":["PF11021"],"protein_name":"Putative secreted protein Rv0236A","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MNRIVAPAAASVVVGLLLGAAAIFGVTLMVQQDKKPPLPGGDPSSSVLNRVEYGNRS","sequence_length":57,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"3306b1a7bcbb3fd9b12171b7e1cf4e22141cf463ac39f6342ed18a642695082e","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/P9WLB1.json","taxon_id":"83332","uniprot_accession":"P9WLB1","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Mycobacterium leprae (strain TN)","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/duf2613-pf11021.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF11021","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/duf2613-pf11021.yaml"}],"pfam_ids":["PF11021"],"protein_name":"Putative secreted protein ML2569.1","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MSRIVAPAAASVVVGLLLGAATIFGMTLMVQQDTKPPLPGGDPQSSVLNRVEYGNRT","sequence_length":57,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"974ec7207731ec28948045bd8d127897e1367d11cf0b0b937b73a569ed0d9fab","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/Q9CD20.json","taxon_id":"272631","uniprot_accession":"Q9CD20","uniprot_release":"2026_03"}],"pfam_id":"PF11021","short_name":"DUF2613","status":"HAS_SEQUENCE_EXAMPLE","unresolved":[]}}