{"cross_mech":[],"family":{"alphafold_models":3780,"candidate_reasons":["pfam_previous_unknown_name"],"characterization_status":"","context_evidence_count":null,"cross_mech":{"example_proteins":0,"protein_traits_record":false,"records_by_mech":{},"scanned":false},"curation_status":"SEEDED","demotion_reasons":[],"description":"This entry represents RETICULATA and related proteins from plants. Arabidopsis RETICULATA protein is involved in differential development of bundle sheath and mesophyll cell chloroplasts [[cite:PUB00075342]].","domain_architectures":102,"interpro_id":"IPR021825","known_evidence_count":null,"matches":4800,"name":"Protein RETICULATA-related","partial_evidence_count":null,"pfam_id":"PF11891","proteins":4699,"proteomes":470,"short_name":"RETICULATA-like","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF11891","structures":0,"taxa":1327,"unknown_status":"EX_DUF"},"inputs":{"cross_mech":"cross-mech-duf-examples-2026-10-10","members":"pfam-uniprot-uniref90-2026-10-07","protein_examples":"duf-protein-examples-2026-10-13","worklist":"interpro-pfam-duf-2026-10-10"},"members":[],"metadata":{"curation_status":"SEEDED","local_source":"source/data/families/PF11891.yaml","record":{"characterization_status":"UNSCORED","counters":{"alphafold_models":3780,"domain_architectures":102,"matches":4800,"proteins":4699,"proteomes":470,"structures":0,"taxa":1327},"curation_status":"SEEDED","description":"This entry represents RETICULATA and related proteins from plants. Arabidopsis RETICULATA protein is involved in differential development of bundle sheath and mesophyll cell chloroplasts [[cite:PUB00075342]].","id":"Pfam:PF11891","interpro_id":"InterPro:IPR021825","name":"Protein RETICULATA-related","pfam_id":"PF11891","provenance":{"generated_at":"2026-10-10T07:44:21.614711Z","path":"data/worklists/interpro-pfam-duf-2026-10-10.json","sha256":"17fb625876c9326ed284263a47bcd84e0d7844a31c040dc06cd2260c36f1c383","snapshot_id":"interpro-pfam-duf-2026-10-10","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/"},"seed_status":"EX_DUF","short_name":"RETICULATA-like","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF11891"},"source":{"commit":"c8155abfcf881ad8662936343deb81e604e3a194","path":"data/families/PF11891.yaml","repository":"https://github.com/CultureBotAI/DUFMech","sha256":"cde420387405987822d2d42bcb847e9b0f90c0db082cb9710964ed2db4612790"}},"protein_examples":{"candidate_count":7,"discovery_scanned":true,"example_count":7,"examples":[{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Arabidopsis thaliana","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/function/localization/go/chloroplast-inner-membrane-go0009706.yaml","qualification_status":"NOT_ASSESSED","record_id":"GO:0009706","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/function/localization/go/chloroplast-inner-membrane-go0009706.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/function/molecular_function/go/l-ornithine-transmembrane-transporter-activity-go0000064.yaml","qualification_status":"NOT_ASSESSED","record_id":"GO:0000064","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/function/molecular_function/go/l-ornithine-transmembrane-transporter-activity-go0000064.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/function/pathway/go/ornithine-transport-go0015822.yaml","qualification_status":"NOT_ASSESSED","record_id":"GO:0015822","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/function/pathway/go/ornithine-transport-go0015822.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/function/pathway/go/photoperiodism-go0009648.yaml","qualification_status":"NOT_ASSESSED","record_id":"GO:0009648","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/function/pathway/go/photoperiodism-go0009648.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/function/pathway/go/plant-organ-development-go0099402.yaml","qualification_status":"NOT_ASSESSED","record_id":"GO:0099402","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/function/pathway/go/plant-organ-development-go0099402.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/reticulata-like-pf11891.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF11891","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/reticulata-like-pf11891.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["ptm_registry_exact_uniprot_pfam_xref"],"mech":"ProteinTraitsMech","path":"data/grounding/protein_registry.jsonl","qualification_status":"NOT_ASSESSED_FOR_THIS_FAMILY","record_id":"UniProtKB:B9DFK5","section":"protein_registry","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/grounding/protein_registry.jsonl"}],"pfam_ids":["PF11891"],"protein_name":"Protein RETICULATA, chloroplastic","registry_source":{"commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","path":"data/grounding/protein_registry.jsonl","repository":"https://github.com/CultureBotAI/proteintraitsmech","sequence_sha256":"b5eef5debd808b2f2cc3ffb8bcbb9d129bbd1eb8425899471f9dec9936ad9341","sequence_version":1,"sha256":"1be0cf02b76b03a8fe9b80bcead9cd4a419157116eb8da038f266bcc33015eb9","uniprot_release":"2026_03","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/grounding/protein_registry.jsonl"},"registry_status":"EXACT_SEQUENCE_VERSION_MATCH","reviewed":true,"sequence":"MAGCAMNLQFSSVVKVRNEISSFGICNRDFVFRDLAKAMKVPVLRIRGGSGRQRSRLFVVNMSQSPIEPQSGGFAATEQIKGEGDNSILGKDNVRNLGTDQLENLDIDGNVGDGFNGSDGNGGGGGGGNGGEGDGEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLEAAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFAYNALPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKRNINKSEENIPVPPLIKSAALWGVFLSVSSNTRYQIINGLERVVEASPFAKKFPPAAMAFTVGVRLANNIYGGMQFVDWARLSGCQ","sequence_length":432,"sequence_origin":"PTM_REGISTRY_MIRROR","sequence_sha256":"b5eef5debd808b2f2cc3ffb8bcbb9d129bbd1eb8425899471f9dec9936ad9341","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/B9DFK5.json","taxon_id":"3702","uniprot_accession":"B9DFK5","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Arabidopsis thaliana","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/cdd/chan-is-an-iron-regulated-heme-binding-protein-this-family-represents--cd14727.yaml","qualification_status":"NOT_ASSESSED","record_id":"CDD:cd14727","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/cdd/chan-is-an-iron-regulated-heme-binding-protein-this-family-represents--cd14727.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/interpro/haem-binding-uptake-tiki-superfamily-chan-ipr007314.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR007314","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/interpro/haem-binding-uptake-tiki-superfamily-chan-ipr007314.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/pfam/cofac-haem-bdg-pf04187.yaml","qualification_status":"NOT_ASSESSED","record_id":"Pfam:PF04187","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/pfam/cofac-haem-bdg-pf04187.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/reticulata-like-pf11891.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF11891","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/reticulata-like-pf11891.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/structure/homologous_superfamily/cath/3-40-50-11550-3-40-50-11550.yaml","qualification_status":"NOT_ASSESSED","record_id":"CATH:3.40.50.11550","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/structure/homologous_superfamily/cath/3-40-50-11550-3-40-50-11550.yaml"}],"pfam_ids":["PF04187","PF11891"],"protein_name":"Protein RETICULATA-RELATED 6, chloroplastic","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MKLTTNDLFASQPLFHCPCSSSSRPRRRRFYGLHFPINLTSEKNNSLSIVALSDSDLPSRTAFSRRAFLLAPPLLVSAASLFLKPSVSLASEESSSATVTSPAESAAPPPPPATTTPSPPPPVNKEETITSRIYDATAIGEPMAMGKDKKKVWEKLLNARVVYLGEAEQVPTKDDKELELEIVRNLRKRCVESERQISVALEAFPLDLQDQLNQYMDKRMDGETLKSYVTHWPAQRWQEYEPLLSYCRDNSVRLIACGTPLKVLRTVQAEGIRGLSKSERKLYTPPAGSGFISGFSSFSRRSTFDMSLPTQIVPFGPSSYLSAQARVVEDHTMSQVILQAVADGGGTGLLLVVTGASHVEYGSRGTGLPARISRKFPKKNQVVVLLDPERQFLRREGETPVADFLWYSAARPCSRNCFDRAEIARVMNAAGRRRDALPPDIQNGLDLGLVSPEVLQNLFDLEQYPLISELTQRFQGFRERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVVDFFTVWLPAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASVIVGGLKLAGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGTSANLRYQIIAGLIEHRLSDELSSQPLLVNAISFVVRTLNSYFGTQQWIDLARSTGLQTQKSIPASKEISEALEEPTVECDTTTEEESIDKLNNQ","sequence_length":745,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"373f3419924766a65f67d3f3c6f7a671456fe3f0672eb6b21d581064a1a26abe","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/Q8RWG3.json","taxon_id":"3702","uniprot_accession":"Q8RWG3","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Arabidopsis thaliana","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/reticulata-like-pf11891.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF11891","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/reticulata-like-pf11891.yaml"}],"pfam_ids":["PF11891"],"protein_name":"Protein RETICULATA-RELATED 4, chloroplastic","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MAIASCFFCVPTPNTAISESNLTWPHIASFPRLSSSSSFNGVISAKSISFNRRVPITPVLSASSGNGGSDNNGGGLSGGGGGGDGGKNDGDGHGDEDRDRNRNEAMLLLKESGIELESLPKDLAAAIEAGRIPGSVITRFLELQKSAVMRWLMQFGGFRERLLADDLFMAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLPAPTVSLRPPLALTAGGISKFFHNCPDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGTTSSLVGTAITNAFIKARKAVDQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGVIEQRLLEPMLHQHKLALSALCFAVRTGNTFLGSLLWVDYARLIGIQKSH","sequence_length":386,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"1fae75ca9c888ff33f31b78ce55cc79237e5d36018db7d9829a1238bff139604","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/Q94CJ5.json","taxon_id":"3702","uniprot_accession":"Q94CJ5","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Arabidopsis thaliana","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/reticulata-like-pf11891.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF11891","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/reticulata-like-pf11891.yaml"}],"pfam_ids":["PF11891"],"protein_name":"Protein RETICULATA-RELATED 3, chloroplastic","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MAAMAAKLQLSAKSDQSSVRLPRVINLSRDPTTRVSFPRNGSVCSLHTNFSSPHLAKPCAGGGGGGSTGNNGGGSGSGGGGGGFGGSGGEASEESSPWGPIGLFIQGWRSRVAADPQFPFKVLMEEIVGLSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFVLMYMLAPTAATLGSSQTLPGIFRNCPSSHMFEQGSFTVMNRFGTLVYKGMVFASVGLAAGLVGTAISNGLIMLRKKMDPSFETPNKPPPTVLNSLTWATHMGVSANARYQTLNGIEFLLAKVLPPLVFKTSVIVLRCANNVAGGMSFVLLARMTGSQSVEEKTEISEKEKDD","sequence_length":337,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"7f5bb3d7f4bb379921dd2ade1c7f9b256e96c378af14f8b1a622ae4212521aa2","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/Q9C9Z2.json","taxon_id":"3702","uniprot_accession":"Q9C9Z2","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Arabidopsis thaliana","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/reticulata-like-pf11891.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF11891","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/reticulata-like-pf11891.yaml"}],"pfam_ids":["PF11891"],"protein_name":"Protein RETICULATA-RELATED 2, chloroplastic","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MAAMAAKLHISTKSDQSNVRLPRLINLSRDPTARVLFPRNGSVSSLHTNFSSPNIMVPCAGGGGGGSIGNHGGGSGSGGGGGGYGGSEEEESSPWGPLGLFIQGWRSRVAADSQFPFKVLMEMLVGVSANVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPSAISHGSSNLLPGIFRSCPSSHMFEQGNFTLMNRFGTLVYKGMVFATVGLAAGLVGTAISNGLIMLRKKIDPSFETPNKPPPTLLNSLTWATHMGVSANVRYQTLNGAEFLLEKSLPPLVFKTSVIALRVVNNVLGGMSFVTLARMTGSQSVEEEKKIEMSEISEKEKED","sequence_length":339,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"4e612f1bb89ce93cb9d6439070e03a0f3d809bfdc5387968f55824d5740d400b","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/Q9C9Z3.json","taxon_id":"3702","uniprot_accession":"Q9C9Z3","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Arabidopsis thaliana","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/reticulata-like-pf11891.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF11891","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/reticulata-like-pf11891.yaml"}],"pfam_ids":["PF11891"],"protein_name":"Protein RETICULATA-RELATED 1, chloroplastic","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MSISLKISHISSFSNDGFNSVKQCRVSQRFEIRSVCFRRSPGVESRRIHLNSDLSSRNLRNRCVGSDVVTGEISGRSIPDWAYSGVKDETLSDLEPELDDGDGGDENGNNDGGGNGGNGDGGGGGGDGEGDDGEDEADKAEEKEFGPILKFEEVMKETERRGITLPEDMLEAAKSVGIRKLFLLRYLDLQGSVWPLGFLMRSCAMLRNRMLADPSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAPYARIGKPSVASTGLFKDLKRACASLPSSVFEAERPGCKFSVNQRIATFFYKGLLYGSVGFGCGLIGQGIANLIMTAKRSVKKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGLERVVEGSTAAKRIPVVAMAFTVGVRFANNVYGGMQFVDWAKLSGVQ","sequence_length":433,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"43ad3777672e670cabfecb10814dfb45c2eb42a3b0966b6305789da1d458c20f","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/Q9FGP9.json","taxon_id":"3702","uniprot_accession":"Q9FGP9","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Arabidopsis thaliana","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/cdd/chan-is-an-iron-regulated-heme-binding-protein-this-family-represents--cd14727.yaml","qualification_status":"NOT_ASSESSED","record_id":"CDD:cd14727","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/cdd/chan-is-an-iron-regulated-heme-binding-protein-this-family-represents--cd14727.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/interpro/haem-binding-uptake-tiki-superfamily-chan-ipr007314.yaml","qualification_status":"NOT_ASSESSED","record_id":"InterPro:IPR007314","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/interpro/haem-binding-uptake-tiki-superfamily-chan-ipr007314.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/domain/pfam/cofac-haem-bdg-pf04187.yaml","qualification_status":"NOT_ASSESSED","record_id":"Pfam:PF04187","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/domain/pfam/cofac-haem-bdg-pf04187.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/reticulata-like-pf11891.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF11891","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/reticulata-like-pf11891.yaml"},{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification"],"mech":"ProteinTraitsMech","path":"data/traits/structure/homologous_superfamily/cath/3-40-50-11550-3-40-50-11550.yaml","qualification_status":"NOT_ASSESSED","record_id":"CATH:3.40.50.11550","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/structure/homologous_superfamily/cath/3-40-50-11550-3-40-50-11550.yaml"}],"pfam_ids":["PF04187","PF11891"],"protein_name":"Protein RETICULATA-RELATED 5, chloroplastic","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MKPTTNGGLLASQSSSSFSFPRFRGQLPIIFSANNNQKKKNLPNPNVVTLCLHSHSNVSSSQIAVTRRAILVAPPLLAAAASLFLSISSAASAETSAESVALPPVATAPPPPPVEKEEAITSRIYDASVLGEPMAVGKDKKRVWEKLLNARIVYLGEAEQVPTRDDKVLELEIVRNLRKRCIESDRQLSLALEAFPLDLQEQLNQYMDKRMDGEVLKSYVSHWPVQRWQEYEPLLSYCRDNGVKLIACGTPLKVLRTVQAEGIRGLSESERKLYTPPAGSGFISGFTSFSRSSSLNMNPLTQIVPFGPSSYLSAQARVVEDHTMSQVIVQAVADGGGTGMLVVVTGANHVEYGSRGTGLPARISRKIPKKSQLVVLLDPERQFLRKEGESPVADFLWYSAARPCSRNCFDRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQRFQGFRERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFTVWLPAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASVIIGGLKLAGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKTALVYGGYLGTSSNIRYQIIAGLIEHRISDELSSQPLLVNMISFVVRVANSYFGTQQWIDLARSTGLQTQKSVTTSNQIPEVASQSTVEYSTTEEASMDDLKNQ","sequence_length":735,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"cf5e135f4503a647aa4751f6e15514138b85080e581d4c70a585e91971032b35","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/Q9SIY5.json","taxon_id":"3702","uniprot_accession":"Q9SIY5","uniprot_release":"2026_03"}],"pfam_id":"PF11891","short_name":"RETICULATA-like","status":"HAS_SEQUENCE_EXAMPLE","unresolved":[]}}