{"cross_mech":[{"cited_uniprot_accession":"","family_mentioned_in_record":null,"link_basis":["trait_identifier"],"pfam_id":"PF11953","protein_label":"","reviewed":null,"short_name":"DUF3470","source_category":"sequence/domain/interpro","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/domain/interpro/ferredoxin-c-terminal-ipr022569.yaml","source_record_id":"InterPro:IPR022569","source_record_label":"Ferredoxin, C-terminal","source_section":"trait_identifier","taxon_id":"","taxon_label":"","uniprot_accession":"","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF11953","protein_label":"Ferredoxin-1","reviewed":true,"short_name":"DUF3470","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf3470-pf11953.yaml","source_record_id":"Pfam:PF11953","source_record_label":"Domain of unknown function (DUF3470)","source_section":"canonical_examples","taxon_id":"NCBITaxon:354","taxon_label":"Azotobacter vinelandii","uniprot_accession":"P00214","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF11953","protein_label":"Ferredoxin 1","reviewed":true,"short_name":"DUF3470","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf3470-pf11953.yaml","source_record_id":"Pfam:PF11953","source_record_label":"Domain of unknown function (DUF3470)","source_section":"canonical_examples","taxon_id":"NCBITaxon:316","taxon_label":"Stutzerimonas stutzeri","uniprot_accession":"P08811","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":true,"link_basis":["canonical_example_family_classification"],"pfam_id":"PF11953","protein_label":"Ferredoxin-2","reviewed":true,"short_name":"DUF3470","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf3470-pf11953.yaml","source_record_id":"Pfam:PF11953","source_record_label":"Domain of unknown function (DUF3470)","source_section":"canonical_examples","taxon_id":"NCBITaxon:1061","taxon_label":"Rhodobacter capsulatus","uniprot_accession":"P0CY91","unknown_status":"UNKNOWN_CANDIDATE"},{"cited_uniprot_accession":"","family_mentioned_in_record":null,"link_basis":["trait_identifier"],"pfam_id":"PF11953","protein_label":"","reviewed":null,"short_name":"DUF3470","source_category":"sequence/family/pfam","source_mech":"ProteinTraitsMech","source_path":"data/traits/sequence/family/pfam/duf3470-pf11953.yaml","source_record_id":"Pfam:PF11953","source_record_label":"Domain of unknown function (DUF3470)","source_section":"trait_identifier","taxon_id":"","taxon_label":"","uniprot_accession":"","unknown_status":"UNKNOWN_CANDIDATE"}],"family":{"alphafold_models":4254,"candidate_reasons":["short_name_matches_duf","name_says_unknown_function","domain_of_unknown_function"],"characterization_status":"","context_evidence_count":null,"cross_mech":{"example_proteins":3,"protein_traits_record":true,"records_by_mech":{"ProteinTraitsMech":1},"scanned":true},"curation_status":"SEEDED","demotion_reasons":[],"description":"This presumed domain is functionally uncharacterised. This domain is found in bacteria. This domain is about 50 amino acids in length. This domain is found associated with [pfam:PF00037]. This domain has a single completely conserved residue N that may be functionally important.","domain_architectures":12,"interpro_id":"IPR022569","known_evidence_count":null,"matches":6412,"name":"Domain of unknown function (DUF3470)","partial_evidence_count":null,"pfam_id":"PF11953","proteins":6412,"proteomes":5697,"short_name":"DUF3470","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF11953","structures":32,"taxa":7784,"unknown_status":"UNKNOWN_CANDIDATE"},"inputs":{"cross_mech":"cross-mech-duf-examples-2026-10-10","members":"pfam-uniprot-uniref90-2026-10-07","protein_examples":"duf-protein-examples-2026-10-13","worklist":"interpro-pfam-duf-2026-10-10"},"members":[],"metadata":{"curation_status":"SEEDED","local_source":"source/data/families/PF11953.yaml","record":{"characterization_status":"UNSCORED","counters":{"alphafold_models":4254,"domain_architectures":12,"matches":6412,"proteins":6412,"proteomes":5697,"structures":32,"taxa":7784},"curation_status":"SEEDED","description":"This presumed domain is functionally uncharacterised. This domain is found in bacteria. This domain is about 50 amino acids in length. This domain is found associated with [pfam:PF00037]. This domain has a single completely conserved residue N that may be functionally important.","id":"Pfam:PF11953","interpro_id":"InterPro:IPR022569","name":"Domain of unknown function (DUF3470)","pfam_id":"PF11953","provenance":{"generated_at":"2026-10-10T07:44:21.614711Z","path":"data/worklists/interpro-pfam-duf-2026-10-10.json","sha256":"17fb625876c9326ed284263a47bcd84e0d7844a31c040dc06cd2260c36f1c383","snapshot_id":"interpro-pfam-duf-2026-10-10","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/"},"seed_status":"UNKNOWN_CANDIDATE","short_name":"DUF3470","source_url":"https://www.ebi.ac.uk/interpro/api/entry/pfam/PF11953"},"source":{"commit":"c8155abfcf881ad8662936343deb81e604e3a194","path":"data/families/PF11953.yaml","repository":"https://github.com/CultureBotAI/DUFMech","sha256":"1d46f4f38d7e0c924f74cbf3e5006534b292aa8d580e4ebfc44d0253c365dd37"}},"protein_examples":{"candidate_count":3,"discovery_scanned":true,"example_count":3,"examples":[{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Azotobacter vinelandii","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/duf3470-pf11953.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF11953","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/duf3470-pf11953.yaml"}],"pfam_ids":["PF00037","PF11953"],"protein_name":"Ferredoxin-1","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MAFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHLER","sequence_length":107,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"2b98f7367b5d9de897e599d320f8460fef38b6e560400034f8f9898d7975d256","sequence_version":2,"source_url":"https://rest.uniprot.org/uniprotkb/P00214.json","taxon_id":"354","uniprot_accession":"P00214","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Stutzerimonas stutzeri","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/duf3470-pf11953.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF11953","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/duf3470-pf11953.yaml"}],"pfam_ids":["PF00037","PF11953"],"protein_name":"Ferredoxin 1","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPEDQQEFIELNADLAEVWPNITEKKDALADAEEWDGVKDKLQYLER","sequence_length":107,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"64649b820de4d328891666ecdbd2a8a10abc90e1935aedbfa1913b1d2b797d46","sequence_version":2,"source_url":"https://rest.uniprot.org/uniprotkb/P08811.json","taxon_id":"316","uniprot_accession":"P08811","uniprot_release":"2026_03"},{"evidence_scope":"FAMILY_MEMBERSHIP_NOT_FUNCTION","organism":"Rhodobacter capsulatus","origins":[{"cited_uniprot_accession":"","commit":"70edd6f8458845f7d7783ac4f416df519f5e1de6","link_basis":["canonical_example_family_classification","ptm_own_pfam_record_example"],"mech":"ProteinTraitsMech","path":"data/traits/sequence/family/pfam/duf3470-pf11953.yaml","qualification_status":"LEGACY_OR_UNSPECIFIED","record_id":"Pfam:PF11953","section":"canonical_examples","url":"https://github.com/CultureBotAI/proteintraitsmech/blob/70edd6f8458845f7d7783ac4f416df519f5e1de6/data/traits/sequence/family/pfam/duf3470-pf11953.yaml"}],"pfam_ids":["PF00037","PF11953"],"protein_name":"Ferredoxin-2","registry_status":"NOT_IN_REGISTRY","reviewed":true,"sequence":"MTYVVTDNCIACKYTDCVEVCPVDCFYEGENTLVIHPDECIDCGVCEPECPADAIRPDTEPGMEDWVEFNRTYASQWPVITIKKDPMPDHKKYDGETGKREKYFSPNPGTGD","sequence_length":112,"sequence_origin":"UNIPROT_FETCH","sequence_sha256":"9e7ecd7417923880275e9ad8910dadf448048796a0f04b81660037f17ab78053","sequence_version":1,"source_url":"https://rest.uniprot.org/uniprotkb/P0CY91.json","taxon_id":"1061","uniprot_accession":"P0CY91","uniprot_release":"2026_03"}],"pfam_id":"PF11953","short_name":"DUF3470","status":"HAS_SEQUENCE_EXAMPLE","unresolved":[]}}